RNA–Protein interactions for RNA: ENST00000600244.5

SSBP4-207, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2

Gene SSBP4, Length 622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-207ENST00000600244 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.56■□□□□ 0.4
SSBP4-207ENST00000600244 LIMA1Q9UHB6 759 aaKnown RBP17.56■□□□□ 0.4
SSBP4-207ENST00000600244 GOLGA6L3A6NEY3 463 aa17.55■□□□□ 0.4
SSBP4-207ENST00000600244 TEX33O43247 280 aa17.55■□□□□ 0.4
SSBP4-207ENST00000600244 KRT5P13647 590 aa17.55■□□□□ 0.4
SSBP4-207ENST00000600244 ADCY8P40145 1251 aa17.55■□□□□ 0.4
SSBP4-207ENST00000600244 GNPDA1P46926 289 aa17.55■□□□□ 0.4
SSBP4-207ENST00000600244 MAPKAPK2P49137 400 aa17.55■□□□□ 0.4
SSBP4-207ENST00000600244 SULT1E1P49888 294 aa17.55■□□□□ 0.4
SSBP4-207ENST00000600244 MAN2A1Q16706 1144 aa17.55■□□□□ 0.4
SSBP4-207ENST00000600244 UGT8Q16880 541 aa17.55■□□□□ 0.4
SSBP4-207ENST00000600244 INO80DQ53TQ3 878 aaPredicted RBP17.55■□□□□ 0.4
SSBP4-207ENST00000600244 MIIPQ5JXC2 388 aa17.55■□□□□ 0.4
SSBP4-207ENST00000600244 HPS6Q86YV9 775 aa17.55■□□□□ 0.4
SSBP4-207ENST00000600244 CASKIN2Q8WXE0 1202 aa17.55■□□□□ 0.4
SSBP4-207ENST00000600244 NCSTNQ92542 709 aa17.55■□□□□ 0.4
SSBP4-207ENST00000600244 STAMBPL1Q96FJ0 436 aa17.55■□□□□ 0.4
SSBP4-207ENST00000600244 TUBGCP2Q9BSJ2 902 aa17.55■□□□□ 0.4
SSBP4-207ENST00000600244 ING2Q9H160 280 aa17.55■□□□□ 0.4
SSBP4-207ENST00000600244 RETREG1Q9H6L5 497 aa17.55■□□□□ 0.4
SSBP4-207ENST00000600244 TMEM51Q9NW97 253 aa17.55■□□□□ 0.4
SSBP4-207ENST00000600244 DNAI1Q9UI46 699 aa17.55■□□□□ 0.4
SSBP4-207ENST00000600244 STAP1Q9ULZ2 295 aa17.55■□□□□ 0.4
SSBP4-207ENST00000600244 SUFUQ9UMX1 484 aa17.55■□□□□ 0.4
SSBP4-207ENST00000600244 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.55■□□□□ 0.4
SSBP4-207ENST00000600244 ZSCAN5CA6NGD5 496 aaPredicted RBP17.54■□□□□ 0.4
SSBP4-207ENST00000600244 BUB1O43683 1085 aa17.54■□□□□ 0.4
SSBP4-207ENST00000600244 GNA15P30679 374 aa17.54■□□□□ 0.4
SSBP4-207ENST00000600244 GARSP41250 739 aaKnown RBP17.54■□□□□ 0.4
SSBP4-207ENST00000600244 MTIF2P46199 727 aaKnown RBP17.54■□□□□ 0.4
SSBP4-207ENST00000600244 ITGA1P56199 1179 aa17.54■□□□□ 0.4
SSBP4-207ENST00000600244 RHOAP61586 193 aa17.54■□□□□ 0.4
SSBP4-207ENST00000600244 KRT31Q15323 416 aa17.54■□□□□ 0.4
SSBP4-207ENST00000600244 ZRSR2Q15696 482 aaKnown RBP17.54■□□□□ 0.4
SSBP4-207ENST00000600244 MANEALQ5VSG8 457 aa17.54■□□□□ 0.4
SSBP4-207ENST00000600244 AFMIDQ63HM1 303 aa17.54■□□□□ 0.4
SSBP4-207ENST00000600244 BRAT1Q6PJG6 821 aa17.54■□□□□ 0.4
SSBP4-207ENST00000600244 BNIPLQ7Z465 357 aa17.54■□□□□ 0.4
SSBP4-207ENST00000600244 SLC37A2Q8TED4 501 aa17.54■□□□□ 0.4
SSBP4-207ENST00000600244 CT55Q8WUE5 264 aa17.54■□□□□ 0.4
SSBP4-207ENST00000600244 ANP32EQ9BTT0 268 aa17.54■□□□□ 0.4
SSBP4-207ENST00000600244 TEX101Q9BY14 249 aa17.54■□□□□ 0.4
SSBP4-207ENST00000600244 ACTL8Q9H568 366 aa17.54■□□□□ 0.4
SSBP4-207ENST00000600244 ACSS2Q9NR19 701 aa17.54■□□□□ 0.4
SSBP4-207ENST00000600244 LHX3Q9UBR4 397 aa17.54■□□□□ 0.4
SSBP4-207ENST00000600244 ITGB1BP2Q9UKP3 347 aa17.54■□□□□ 0.4
SSBP4-207ENST00000600244 PADI1Q9ULC6 663 aa17.54■□□□□ 0.4
SSBP4-207ENST00000600244 PLEKHM1Q9Y4G2 1056 aa17.54■□□□□ 0.4
SSBP4-207ENST00000600244 BECN2A8MW95 431 aa17.53■□□□□ 0.4
SSBP4-207ENST00000600244 C21orf140B9A014 251 aa17.53■□□□□ 0.4
SSBP4-207ENST00000600244 P4HA2O15460 535 aa17.53■□□□□ 0.4
SSBP4-207ENST00000600244 KIAA0754O94854 1291 aa17.53■□□□□ 0.4
SSBP4-207ENST00000600244 ANKRD34CP0C6C1 535 aa17.53■□□□□ 0.4
SSBP4-207ENST00000600244 ATP1A3P13637 1013 aa17.53■□□□□ 0.4
SSBP4-207ENST00000600244 RHOQP17081 205 aa17.53■□□□□ 0.4
SSBP4-207ENST00000600244 CASP14P31944 242 aa17.53■□□□□ 0.4
SSBP4-207ENST00000600244 FOXM1Q08050 763 aa17.53■□□□□ 0.4
SSBP4-207ENST00000600244 SLC25A52Q3SY17 297 aa17.53■□□□□ 0.4
SSBP4-207ENST00000600244 VWA3BQ502W6 1294 aa17.53■□□□□ 0.4
SSBP4-207ENST00000600244 GAS2L3Q86XJ1 694 aa17.53■□□□□ 0.4
SSBP4-207ENST00000600244 SFRP1Q8N474 314 aa17.53■□□□□ 0.4
SSBP4-207ENST00000600244 EHBP1Q8NDI1 1231 aa17.53■□□□□ 0.4
SSBP4-207ENST00000600244 SEC14L1Q92503 715 aa17.53■□□□□ 0.4
SSBP4-207ENST00000600244 ZNF641Q96N77 438 aaPredicted RBP17.53■□□□□ 0.4
SSBP4-207ENST00000600244 BARD1Q99728 777 aaKnown RBP17.53■□□□□ 0.4
SSBP4-207ENST00000600244 TMEM248Q9NWD8 314 aa17.53■□□□□ 0.4
SSBP4-207ENST00000600244 TRBV23OR9-2A0A075B6M9 112 aa17.52■□□□□ 0.4
SSBP4-207ENST00000600244 ARGFXA6NJG6 315 aa17.52■□□□□ 0.4
SSBP4-207ENST00000600244 NDUFA10O95299 355 aa17.52■□□□□ 0.4
SSBP4-207ENST00000600244 IVLP07476 585 aa17.52■□□□□ 0.4
SSBP4-207ENST00000600244 CCNYL3P0C7X3 344 aa17.52■□□□□ 0.4
SSBP4-207ENST00000600244 ITGA3P26006 1051 aa17.52■□□□□ 0.4
SSBP4-207ENST00000600244 ACTR1BP42025 376 aa17.52■□□□□ 0.4
SSBP4-207ENST00000600244 PPM1FP49593 454 aaPredicted RBP17.52■□□□□ 0.4
SSBP4-207ENST00000600244 RNASE9P60153 205 aaKnown RBP17.52■□□□□ 0.4
SSBP4-207ENST00000600244 ACTR1AP61163 376 aa17.52■□□□□ 0.4
SSBP4-207ENST00000600244 NRG1Q02297 640 aaPredicted RBP17.52■□□□□ 0.4
SSBP4-207ENST00000600244 PLEKHN1Q494U1 663 aaPredicted RBP17.52■□□□□ 0.4
SSBP4-207ENST00000600244 PTPN20Q4JDL3 420 aa17.52■□□□□ 0.4
SSBP4-207ENST00000600244 SPNS3Q6ZMD2 512 aa17.52■□□□□ 0.4
SSBP4-207ENST00000600244 RHOT1Q8IXI2 618 aa17.52■□□□□ 0.4
SSBP4-207ENST00000600244 CISD2Q8N5K1 135 aaKnown RBP17.52■□□□□ 0.4
SSBP4-207ENST00000600244 SCARF2Q96GP6 870 aaPredicted RBP17.52■□□□□ 0.4
SSBP4-207ENST00000600244 KLC2Q9H0B6 622 aa17.52■□□□□ 0.4
SSBP4-207ENST00000600244 NDST4Q9H3R1 872 aa17.52■□□□□ 0.4
SSBP4-207ENST00000600244 LHX9Q9NQ69 397 aa17.52■□□□□ 0.4
SSBP4-207ENST00000600244 PHPT1Q9NRX4 125 aaPredicted RBP17.52■□□□□ 0.4
SSBP4-207ENST00000600244 KLHL3Q9UH77 587 aa17.52■□□□□ 0.4
SSBP4-207ENST00000600244 SLC17A4Q9Y2C5 497 aa17.52■□□□□ 0.4
SSBP4-207ENST00000600244 TACC2O95359 2948 aa17.51■□□□□ 0.39
SSBP4-207ENST00000600244 GTPBP10A4D1E9 387 aaKnown RBP17.51■□□□□ 0.39
SSBP4-207ENST00000600244 RAMP2O60895 175 aa17.51■□□□□ 0.39
SSBP4-207ENST00000600244 ELFN1P0C7U0 828 aa17.51■□□□□ 0.39
SSBP4-207ENST00000600244 POLD2P49005 469 aa17.51■□□□□ 0.39
SSBP4-207ENST00000600244 LAMB3Q13751 1172 aa17.51■□□□□ 0.39
SSBP4-207ENST00000600244 ELOAQ14241 798 aaKnown RBP17.51■□□□□ 0.39
SSBP4-207ENST00000600244 IL11RAQ14626 422 aa17.51■□□□□ 0.39
SSBP4-207ENST00000600244 GRM3Q14832 879 aa17.51■□□□□ 0.39
SSBP4-207ENST00000600244 CYTH1Q15438 398 aa17.51■□□□□ 0.39
SSBP4-207ENST00000600244 CAMK1DQ8IU85 385 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms