RNA–Protein interactions for RNA: ENST00000589964.1

CROCCP3-203, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 3, humanhuman

TSL 3 BASIC

Gene CROCCP3, Length 255 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3-203ENST00000589964 MFSD7Q6UXD7 560 aa16.78■□□□□ 0.28
CROCCP3-203ENST00000589964 KDELC2Q7Z4H8 507 aa16.78■□□□□ 0.28
CROCCP3-203ENST00000589964 SPRED1Q7Z699 444 aa16.78■□□□□ 0.28
CROCCP3-203ENST00000589964 CCNYQ8ND76 341 aa16.78■□□□□ 0.28
CROCCP3-203ENST00000589964 TPCN2Q8NHX9 752 aa16.78■□□□□ 0.28
CROCCP3-203ENST00000589964 NSMCE1Q8WV22 266 aa16.78■□□□□ 0.28
CROCCP3-203ENST00000589964 HDAC11Q96DB2 347 aa16.78■□□□□ 0.28
CROCCP3-203ENST00000589964 SLC46A1Q96NT5 459 aa16.78■□□□□ 0.28
CROCCP3-203ENST00000589964 FCRL3Q96P31 734 aaPredicted RBP16.78■□□□□ 0.28
CROCCP3-203ENST00000589964 OLFM3Q96PB7 478 aa16.78■□□□□ 0.28
CROCCP3-203ENST00000589964 SEMA6CQ9H3T2 930 aa16.78■□□□□ 0.28
CROCCP3-203ENST00000589964 LRRN3Q9H3W5 708 aa16.78■□□□□ 0.28
CROCCP3-203ENST00000589964 DPEP2Q9H4A9 486 aa16.78■□□□□ 0.28
CROCCP3-203ENST00000589964 DEF6Q9H4E7 631 aa16.78■□□□□ 0.28
CROCCP3-203ENST00000589964 RDH14Q9HBH5 336 aa16.78■□□□□ 0.28
CROCCP3-203ENST00000589964 ARFGAP3Q9NP61 516 aa16.78■□□□□ 0.28
CROCCP3-203ENST00000589964 PHPT1Q9NRX4 125 aaPredicted RBP16.78■□□□□ 0.28
CROCCP3-203ENST00000589964 TAAR2Q9P1P5 351 aa16.78■□□□□ 0.28
CROCCP3-203ENST00000589964 SLC17A4Q9Y2C5 497 aa16.78■□□□□ 0.28
CROCCP3-203ENST00000589964 SCN8AQ9UQD0 1980 aa16.77■□□□□ 0.28
CROCCP3-203ENST00000589964 TNFSF15O95150 251 aa16.77■□□□□ 0.28
CROCCP3-203ENST00000589964 ATP1A1P05023 1023 aaKnown RBP16.77■□□□□ 0.28
CROCCP3-203ENST00000589964 KRT7P08729 469 aa16.77■□□□□ 0.28
CROCCP3-203ENST00000589964 KRT10P13645 584 aa16.77■□□□□ 0.28
CROCCP3-203ENST00000589964 ITIH1P19827 911 aa16.77■□□□□ 0.28
CROCCP3-203ENST00000589964 COMTP21964 271 aa16.77■□□□□ 0.28
CROCCP3-203ENST00000589964 B4GALNT1Q00973 533 aa16.77■□□□□ 0.28
CROCCP3-203ENST00000589964 CTBSQ01459 385 aa16.77■□□□□ 0.28
CROCCP3-203ENST00000589964 PPIDQ08752 370 aaKnown RBP16.77■□□□□ 0.28
CROCCP3-203ENST00000589964 ZFYVE27Q5T4F4 411 aa16.77■□□□□ 0.28
CROCCP3-203ENST00000589964 C17orf82Q86X59 251 aaPredicted RBP16.77■□□□□ 0.28
CROCCP3-203ENST00000589964 ZNF761Q86XN6 746 aaPredicted RBP16.77■□□□□ 0.28
CROCCP3-203ENST00000589964 CCDC13Q8IYE1 715 aa16.77■□□□□ 0.28
CROCCP3-203ENST00000589964 BBS5Q8N3I7 341 aa16.77■□□□□ 0.28
CROCCP3-203ENST00000589964 TC2NQ8N9U0 490 aa16.77■□□□□ 0.28
CROCCP3-203ENST00000589964 SPATA22Q8NHS9 363 aa16.77■□□□□ 0.28
CROCCP3-203ENST00000589964 GLMNQ92990 594 aa16.77■□□□□ 0.28
CROCCP3-203ENST00000589964 PMEPA1Q969W9 287 aa16.77■□□□□ 0.28
CROCCP3-203ENST00000589964 AP2M1Q96CW1 435 aa16.77■□□□□ 0.28
CROCCP3-203ENST00000589964 GFM1Q96RP9 751 aaKnown RBP16.77■□□□□ 0.28
CROCCP3-203ENST00000589964 TRIB3Q96RU7 358 aa16.77■□□□□ 0.28
CROCCP3-203ENST00000589964 NUDT22Q9BRQ3 303 aa16.77■□□□□ 0.28
CROCCP3-203ENST00000589964 HERPUD2Q9BSE4 406 aa16.77■□□□□ 0.28
CROCCP3-203ENST00000589964 PCDH9Q9HC56 1237 aa16.77■□□□□ 0.28
CROCCP3-203ENST00000589964 EVA1BQ9NVM1 165 aa16.77■□□□□ 0.28
CROCCP3-203ENST00000589964 LRIT1Q9P2V4 623 aa16.77■□□□□ 0.28
CROCCP3-203ENST00000589964 TRBV23OR9-2A0A075B6M9 112 aa16.76■□□□□ 0.27
CROCCP3-203ENST00000589964 CBFA2T2O43439 604 aa16.76■□□□□ 0.27
CROCCP3-203ENST00000589964 TCEA3O75764 348 aa16.76■□□□□ 0.27
CROCCP3-203ENST00000589964 ECEL1O95672 775 aa16.76■□□□□ 0.27
CROCCP3-203ENST00000589964 GPR1P46091 355 aa16.76■□□□□ 0.27
CROCCP3-203ENST00000589964 PCBP4P57723 403 aaKnown RBP16.76■□□□□ 0.27
CROCCP3-203ENST00000589964 CXADRP78310 365 aa16.76■□□□□ 0.27
CROCCP3-203ENST00000589964 IFI35P80217 286 aaPredicted RBP16.76■□□□□ 0.27
CROCCP3-203ENST00000589964 CFHR1Q03591 330 aa16.76■□□□□ 0.27
CROCCP3-203ENST00000589964 DPTQ07507 201 aa16.76■□□□□ 0.27
CROCCP3-203ENST00000589964 TRIM14Q14142 442 aa16.76■□□□□ 0.27
CROCCP3-203ENST00000589964 ARHGEF7Q14155 803 aa16.76■□□□□ 0.27
CROCCP3-203ENST00000589964 TGIF1Q15583 401 aa16.76■□□□□ 0.27
CROCCP3-203ENST00000589964 RALGPS1Q5JS13 557 aa16.76■□□□□ 0.27
CROCCP3-203ENST00000589964 NKAIN2Q5VXU1 208 aa16.76■□□□□ 0.27
CROCCP3-203ENST00000589964 ADAMTSL4Q6UY14 1074 aa16.76■□□□□ 0.27
CROCCP3-203ENST00000589964 ZNF574Q6ZN55 896 aaPredicted RBP16.76■□□□□ 0.27
CROCCP3-203ENST00000589964 MICALCLQ6ZW33 695 aa16.76■□□□□ 0.27
CROCCP3-203ENST00000589964 LYSMD3Q7Z3D4 306 aa16.76■□□□□ 0.27
CROCCP3-203ENST00000589964 LRRC49Q8IUZ0 686 aa16.76■□□□□ 0.27
CROCCP3-203ENST00000589964 NAGSQ8N159 534 aa16.76■□□□□ 0.27
CROCCP3-203ENST00000589964 FATE1Q969F0 183 aa16.76■□□□□ 0.27
CROCCP3-203ENST00000589964 SCARF2Q96GP6 870 aaPredicted RBP16.76■□□□□ 0.27
CROCCP3-203ENST00000589964 COX14Q96I36 57 aa16.76■□□□□ 0.27
CROCCP3-203ENST00000589964 ZNF578Q96N58 590 aaPredicted RBP16.76■□□□□ 0.27
CROCCP3-203ENST00000589964 AGAP3Q96P47 875 aa16.76■□□□□ 0.27
CROCCP3-203ENST00000589964 TMEM9Q9P0T7 183 aa16.76■□□□□ 0.27
CROCCP3-203ENST00000589964 SEPT10Q9P0V9 454 aa16.76■□□□□ 0.27
CROCCP3-203ENST00000589964 CCDC187A0A096LP49 1063 aa16.75■□□□□ 0.27
CROCCP3-203ENST00000589964 RCCD1A6NED2 376 aa16.75■□□□□ 0.27
CROCCP3-203ENST00000589964 PSMD11O00231 422 aa16.75■□□□□ 0.27
CROCCP3-203ENST00000589964 PPM1DO15297 605 aa16.75■□□□□ 0.27
CROCCP3-203ENST00000589964 RRP8O43159 456 aaKnown RBP16.75■□□□□ 0.27
CROCCP3-203ENST00000589964 KLK10O43240 276 aa16.75■□□□□ 0.27
CROCCP3-203ENST00000589964 EFSO43281 561 aa16.75■□□□□ 0.27
CROCCP3-203ENST00000589964 SLC4A1P02730 911 aa16.75■□□□□ 0.27
CROCCP3-203ENST00000589964 IVLP07476 585 aa16.75■□□□□ 0.27
CROCCP3-203ENST00000589964 CSF2RBP32927 897 aa16.75■□□□□ 0.27
CROCCP3-203ENST00000589964 UGT1A5P35504 534 aa16.75■□□□□ 0.27
CROCCP3-203ENST00000589964 EPHB1P54762 984 aa16.75■□□□□ 0.27
CROCCP3-203ENST00000589964 C16orf72Q14CZ0 275 aa16.75■□□□□ 0.27
CROCCP3-203ENST00000589964 AMZ1Q400G9 498 aa16.75■□□□□ 0.27
CROCCP3-203ENST00000589964 TIGD7Q6NT04 549 aaPredicted RBP16.75■□□□□ 0.27
CROCCP3-203ENST00000589964 LRRC69Q6ZNQ3 347 aa16.75■□□□□ 0.27
CROCCP3-203ENST00000589964 USP53Q70EK8 1073 aa16.75■□□□□ 0.27
CROCCP3-203ENST00000589964 RFX6Q8HWS3 928 aa16.75■□□□□ 0.27
CROCCP3-203ENST00000589964 SLITRK4Q8IW52 837 aa16.75■□□□□ 0.27
CROCCP3-203ENST00000589964 ARL14Q8N4G2 192 aa16.75■□□□□ 0.27
CROCCP3-203ENST00000589964 ATL2Q8NHH9 583 aa16.75■□□□□ 0.27
CROCCP3-203ENST00000589964 ZDHHC1Q8WTX9 485 aa16.75■□□□□ 0.27
CROCCP3-203ENST00000589964 SCG3Q8WXD2 468 aaKnown RBP16.75■□□□□ 0.27
CROCCP3-203ENST00000589964 TADA1Q96BN2 335 aa16.75■□□□□ 0.27
CROCCP3-203ENST00000589964 CCDC42Q96M95 316 aa16.75■□□□□ 0.27
CROCCP3-203ENST00000589964 C10orf88Q9H8K7 445 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms