RNA–Protein interactions for RNA: ENST00000589064.5

MBD3-205, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 2

Gene MBD3, Length 1,475 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-205ENST00000589064 SHROOM3Q8TF72 1996 aa20.66■□□□□ 0.9
MBD3-205ENST00000589064 C1orf232A0A0U1RR37 186 aa20.66■□□□□ 0.9
MBD3-205ENST00000589064 CSO75390 466 aaKnown RBP20.66■□□□□ 0.9
MBD3-205ENST00000589064 GNPDA1P46926 289 aa20.66■□□□□ 0.9
MBD3-205ENST00000589064 PCSK7Q16549 785 aa20.66■□□□□ 0.9
MBD3-205ENST00000589064 OGFOD3Q6PK18 319 aa20.66■□□□□ 0.9
MBD3-205ENST00000589064 DOK6Q6PKX4 331 aa20.66■□□□□ 0.9
MBD3-205ENST00000589064 ADAMTSL4Q6UY14 1074 aa20.66■□□□□ 0.9
MBD3-205ENST00000589064 ZNF765Q7L2R6 523 aa20.66■□□□□ 0.9
MBD3-205ENST00000589064 SFTPA2Q8IWL1 248 aa20.66■□□□□ 0.9
MBD3-205ENST00000589064 TEKT5Q96M29 485 aa20.66■□□□□ 0.9
MBD3-205ENST00000589064 TRIB3Q96RU7 358 aa20.66■□□□□ 0.9
MBD3-205ENST00000589064 CCDC3Q9BQI4 270 aa20.66■□□□□ 0.9
MBD3-205ENST00000589064 SUFUQ9UMX1 484 aa20.66■□□□□ 0.9
MBD3-205ENST00000589064 ANKRD36A6QL64 1941 aa20.66■□□□□ 0.9
MBD3-205ENST00000589064 MT-CYBP00156 380 aaPredicted RBP20.65■□□□□ 0.9
MBD3-205ENST00000589064 CDK18Q07002 472 aa20.65■□□□□ 0.9
MBD3-205ENST00000589064 WASHC5Q12768 1159 aa20.65■□□□□ 0.9
MBD3-205ENST00000589064 TRIM74Q86UV6 250 aa20.65■□□□□ 0.9
MBD3-205ENST00000589064 SPC24Q8NBT2 197 aa20.65■□□□□ 0.9
MBD3-205ENST00000589064 GPR156Q8NFN8 814 aa20.65■□□□□ 0.9
MBD3-205ENST00000589064 TADA1Q96BN2 335 aa20.65■□□□□ 0.9
MBD3-205ENST00000589064 WDR24Q96S15 920 aa20.65■□□□□ 0.9
MBD3-205ENST00000589064 DPEP2Q9H4A9 486 aa20.65■□□□□ 0.9
MBD3-205ENST00000589064 UBP1Q9NZI7 540 aa20.65■□□□□ 0.9
MBD3-205ENST00000589064 SLC17A4Q9Y2C5 497 aa20.65■□□□□ 0.9
MBD3-205ENST00000589064 PCDHA3Q9Y5H8 950 aa20.65■□□□□ 0.9
MBD3-205ENST00000589064 BTNL10A8MVZ5 291 aa20.64■□□□□ 0.89
MBD3-205ENST00000589064 INPP4BO15327 924 aa20.64■□□□□ 0.89
MBD3-205ENST00000589064 USP12O75317 370 aa20.64■□□□□ 0.89
MBD3-205ENST00000589064 PIRTP0C851 137 aa20.64■□□□□ 0.89
MBD3-205ENST00000589064 SPINT3P49223 89 aa20.64■□□□□ 0.89
MBD3-205ENST00000589064 VAV2P52735 878 aa20.64■□□□□ 0.89
MBD3-205ENST00000589064 ISXQ2M1V0 245 aa20.64■□□□□ 0.89
MBD3-205ENST00000589064 NRROSQ86YC3 692 aa20.64■□□□□ 0.89
MBD3-205ENST00000589064 TMEM139Q8IV31 216 aa20.64■□□□□ 0.89
MBD3-205ENST00000589064 KIAA1524Q8TCG1 905 aa20.64■□□□□ 0.89
MBD3-205ENST00000589064 CCHCR1Q8TD31 782 aa20.64■□□□□ 0.89
MBD3-205ENST00000589064 GPBAR1Q8TDU6 330 aa20.64■□□□□ 0.89
MBD3-205ENST00000589064 CCDC74AQ96AQ1 378 aa20.64■□□□□ 0.89
MBD3-205ENST00000589064 HIC2Q96JB3 615 aa20.64■□□□□ 0.89
MBD3-205ENST00000589064 CALR3Q96L12 384 aaKnown RBP20.64■□□□□ 0.89
MBD3-205ENST00000589064 FAM83DQ9H4H8 585 aa20.64■□□□□ 0.89
MBD3-205ENST00000589064 SPATS2LQ9NUQ6 558 aaKnown RBP20.64■□□□□ 0.89
MBD3-205ENST00000589064 RABGEF1Q9UJ41 708 aa20.64■□□□□ 0.89
MBD3-205ENST00000589064 DMXL2Q8TDJ6 3036 aa20.64■□□□□ 0.89
MBD3-205ENST00000589064 B4DGG1 531 aa20.63■□□□□ 0.89
MBD3-205ENST00000589064 PJA2O43164 708 aa20.63■□□□□ 0.89
MBD3-205ENST00000589064 NOBOXO60393 691 aa20.63■□□□□ 0.89
MBD3-205ENST00000589064 PMPCBO75439 489 aa20.63■□□□□ 0.89
MBD3-205ENST00000589064 CD68P34810 354 aaPredicted RBP20.63■□□□□ 0.89
MBD3-205ENST00000589064 CTNNA1P35221 906 aaKnown RBP20.63■□□□□ 0.89
MBD3-205ENST00000589064 PPP2R5EQ16537 467 aa20.63■□□□□ 0.89
MBD3-205ENST00000589064 C19orf48Q6RUI8 117 aa20.63■□□□□ 0.89
MBD3-205ENST00000589064 BBS12Q6ZW61 710 aa20.63■□□□□ 0.89
MBD3-205ENST00000589064 LYSMD3Q7Z3D4 306 aa20.63■□□□□ 0.89
MBD3-205ENST00000589064 KIAA1328Q86T90 577 aa20.63■□□□□ 0.89
MBD3-205ENST00000589064 RAVER1Q8IY67 606 aaKnown RBP20.63■□□□□ 0.89
MBD3-205ENST00000589064 SYNDIG1Q9H7V2 258 aa20.63■□□□□ 0.89
MBD3-205ENST00000589064 TRNAU1APQ9NX07 287 aaKnown RBP20.63■□□□□ 0.89
MBD3-205ENST00000589064 PKD2L2Q9NZM6 624 aa20.63■□□□□ 0.89
MBD3-205ENST00000589064 SHOC2Q9UQ13 582 aa20.63■□□□□ 0.89
MBD3-205ENST00000589064 GPSM3Q9Y4H4 160 aa20.63■□□□□ 0.89
MBD3-205ENST00000589064 PYGLP06737 847 aa20.62■□□□□ 0.89
MBD3-205ENST00000589064 IVLP07476 585 aa20.62■□□□□ 0.89
MBD3-205ENST00000589064 AK4P27144 223 aaPredicted RBP20.62■□□□□ 0.89
MBD3-205ENST00000589064 CDC25BP30305 580 aa20.62■□□□□ 0.89
MBD3-205ENST00000589064 ILF3Q12906 894 aaKnown RBP eCLIP20.62■□□□□ 0.89
MBD3-205ENST00000589064 RBM44Q6ZP01 1051 aaKnown RBP20.62■□□□□ 0.89
MBD3-205ENST00000589064 MARK2Q7KZI7 788 aaKnown RBP20.62■□□□□ 0.89
MBD3-205ENST00000589064 PID1Q7Z2X4 250 aa20.62■□□□□ 0.89
MBD3-205ENST00000589064 EID2BQ96D98 161 aa20.62■□□□□ 0.89
MBD3-205ENST00000589064 SCARF2Q96GP6 870 aaPredicted RBP20.62■□□□□ 0.89
MBD3-205ENST00000589064 HERPUD2Q9BSE4 406 aa20.62■□□□□ 0.89
MBD3-205ENST00000589064 GSDMCQ9BYG8 508 aa20.62■□□□□ 0.89
MBD3-205ENST00000589064 C10orf88Q9H8K7 445 aa20.62■□□□□ 0.89
MBD3-205ENST00000589064 ZFYVE1Q9HBF4 777 aa20.62■□□□□ 0.89
MBD3-205ENST00000589064 IMPACTQ9P2X3 320 aa20.62■□□□□ 0.89
MBD3-205ENST00000589064 CNOT6Q9ULM6 557 aaKnown RBP20.62■□□□□ 0.89
MBD3-205ENST00000589064 PLEKHM1Q9Y4G2 1056 aa20.62■□□□□ 0.89
MBD3-205ENST00000589064 ST14Q9Y5Y6 855 aa20.62■□□□□ 0.89
MBD3-205ENST00000589064 FREM2Q5SZK8 3169 aa20.62■□□□□ 0.89
MBD3-205ENST00000589064 ZZEF1O43149 2961 aa20.62■□□□□ 0.89
MBD3-205ENST00000589064 F5H423 210 aaPredicted RBP20.62■□□□□ 0.89
MBD3-205ENST00000589064 MTSS1O43312 755 aa20.62■□□□□ 0.89
MBD3-205ENST00000589064 BRINP1O60477 761 aa20.62■□□□□ 0.89
MBD3-205ENST00000589064 ASMTLO95671 621 aa20.62■□□□□ 0.89
MBD3-205ENST00000589064 MPOP05164 745 aa20.62■□□□□ 0.89
MBD3-205ENST00000589064 NFKB1P19838 968 aa20.62■□□□□ 0.89
MBD3-205ENST00000589064 CTNNA2P26232 953 aa20.62■□□□□ 0.89
MBD3-205ENST00000589064 ADCY8P40145 1251 aa20.62■□□□□ 0.89
MBD3-205ENST00000589064 COPS2P61201 443 aa20.62■□□□□ 0.89
MBD3-205ENST00000589064 CCL7P80098 99 aa20.62■□□□□ 0.89
MBD3-205ENST00000589064 CTBSQ01459 385 aa20.62■□□□□ 0.89
MBD3-205ENST00000589064 SLC14A2Q15849 920 aa20.62■□□□□ 0.89
MBD3-205ENST00000589064 CCDC181Q5TID7 509 aa20.62■□□□□ 0.89
MBD3-205ENST00000589064 CCDC70Q6NSX1 233 aa20.62■□□□□ 0.89
MBD3-205ENST00000589064 ZNF567Q8N184 647 aa20.62■□□□□ 0.89
MBD3-205ENST00000589064 Q8N9G6 341 aaPredicted RBP20.62■□□□□ 0.89
MBD3-205ENST00000589064 OR6C4Q8NGE1 309 aa20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms