RNA–Protein interactions for RNA: ENST00000586245.5

VMP1-203, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-203ENST00000586245 NLE1Q9NVX2 485 aaPredicted RBP13.58□□□□□ -0.24
VMP1-203ENST00000586245 NFKBIL1Q9UBC1 381 aaPredicted RBP13.58□□□□□ -0.24
VMP1-203ENST00000586245 APPL1Q9UKG1 709 aa13.58□□□□□ -0.24
VMP1-203ENST00000586245 SOX13Q9UN79 622 aa13.58□□□□□ -0.24
VMP1-203ENST00000586245 FNDC3AQ9Y2H6 1198 aaKnown RBP13.58□□□□□ -0.24
VMP1-203ENST00000586245 GLYATL1P3A0A0U1RQE8 302 aa13.57□□□□□ -0.24
VMP1-203ENST00000586245 FAM237BA0A1B0GVD1 139 aa13.57□□□□□ -0.24
VMP1-203ENST00000586245 RAD51BO15315 384 aa13.57□□□□□ -0.24
VMP1-203ENST00000586245 PYGLP06737 847 aa13.57□□□□□ -0.24
VMP1-203ENST00000586245 GNSP15586 552 aa13.57□□□□□ -0.24
VMP1-203ENST00000586245 TSHRP16473 764 aa13.57□□□□□ -0.24
VMP1-203ENST00000586245 PAMP19021 973 aa13.57□□□□□ -0.24
VMP1-203ENST00000586245 ITPKAP23677 461 aa13.57□□□□□ -0.24
VMP1-203ENST00000586245 GPR1P46091 355 aa13.57□□□□□ -0.24
VMP1-203ENST00000586245 CARSP49589 748 aaKnown RBP13.57□□□□□ -0.24
VMP1-203ENST00000586245 PRAMEP78395 509 aa13.57□□□□□ -0.24
VMP1-203ENST00000586245 DPTQ07507 201 aa13.57□□□□□ -0.24
VMP1-203ENST00000586245 PTPRCAPQ14761 206 aa13.57□□□□□ -0.24
VMP1-203ENST00000586245 IRF4Q15306 451 aa13.57□□□□□ -0.24
VMP1-203ENST00000586245 LPAL2Q16609 132 aa13.57□□□□□ -0.24
VMP1-203ENST00000586245 MSS51Q4VC12 460 aa13.57□□□□□ -0.24
VMP1-203ENST00000586245 HENMT1Q5T8I9 393 aaKnown RBP13.57□□□□□ -0.24
VMP1-203ENST00000586245 ESRP1Q6NXG1 681 aaKnown RBP13.57□□□□□ -0.24
VMP1-203ENST00000586245 NLRP8Q86W28 1048 aa13.57□□□□□ -0.24
VMP1-203ENST00000586245 CCDC25Q86WR0 208 aa13.57□□□□□ -0.24
VMP1-203ENST00000586245 CCNJLQ8IV13 435 aa13.57□□□□□ -0.24
VMP1-203ENST00000586245 GPR161Q8N6U8 529 aaKnown RBP13.57□□□□□ -0.24
VMP1-203ENST00000586245 FAM174AQ8TBP5 190 aa13.57□□□□□ -0.24
VMP1-203ENST00000586245 CENPTQ96BT3 561 aa13.57□□□□□ -0.24
VMP1-203ENST00000586245 LOXL4Q96JB6 756 aa13.57□□□□□ -0.24
VMP1-203ENST00000586245 FMO2Q99518 471 aa13.57□□□□□ -0.24
VMP1-203ENST00000586245 KLF6Q99612 283 aaPredicted RBP13.57□□□□□ -0.24
VMP1-203ENST00000586245 EBNA1BP2Q99848 306 aaKnown RBP13.57□□□□□ -0.24
VMP1-203ENST00000586245 ZSCAN5AQ9BUG6 496 aa13.57□□□□□ -0.24
VMP1-203ENST00000586245 RIOK2Q9BVS4 552 aaKnown RBP13.57□□□□□ -0.24
VMP1-203ENST00000586245 PHACTR1Q9C0D0 580 aa13.57□□□□□ -0.24
VMP1-203ENST00000586245 SAYSD1Q9NPB0 183 aa13.57□□□□□ -0.24
VMP1-203ENST00000586245 MBNL1Q9NR56 388 aaKnown RBP13.57□□□□□ -0.24
VMP1-203ENST00000586245 SLC2A6Q9UGQ3 507 aa13.57□□□□□ -0.24
VMP1-203ENST00000586245 SUSD2Q9UGT4 822 aa13.57□□□□□ -0.24
VMP1-203ENST00000586245 FKBPLQ9UIM3 349 aa13.57□□□□□ -0.24
VMP1-203ENST00000586245 HS3ST3A1Q9Y663 406 aa13.57□□□□□ -0.24
VMP1-203ENST00000586245 SLC30A1Q9Y6M5 507 aa13.57□□□□□ -0.24
VMP1-203ENST00000586245 TRPM6Q9BX84 2022 aa13.57□□□□□ -0.24
VMP1-203ENST00000586245 A6NNZ2 444 aa13.56□□□□□ -0.24
VMP1-203ENST00000586245 PRR5-ARHGAP8B1AHC4 643 aa13.56□□□□□ -0.24
VMP1-203ENST00000586245 E7ESA3 106 aa13.56□□□□□ -0.24
VMP1-203ENST00000586245 H7C0S8 307 aa13.56□□□□□ -0.24
VMP1-203ENST00000586245 BANF1O75531 89 aa13.56□□□□□ -0.24
VMP1-203ENST00000586245 TTC4O95801 387 aa13.56□□□□□ -0.24
VMP1-203ENST00000586245 POLBP06746 335 aa13.56□□□□□ -0.24
VMP1-203ENST00000586245 PGAM1P18669 254 aa13.56□□□□□ -0.24
VMP1-203ENST00000586245 NMBRP28336 390 aa13.56□□□□□ -0.24
VMP1-203ENST00000586245 IGFALSP35858 605 aa13.56□□□□□ -0.24
VMP1-203ENST00000586245 ELK3P41970 407 aa13.56□□□□□ -0.24
VMP1-203ENST00000586245 CLDN2P57739 230 aa13.56□□□□□ -0.24
VMP1-203ENST00000586245 RACK1P63244 317 aaKnown RBP13.56□□□□□ -0.24
VMP1-203ENST00000586245 ANKRD20A4Q4UJ75 823 aa13.56□□□□□ -0.24
VMP1-203ENST00000586245 PDPK2PQ6A1A2 396 aa13.56□□□□□ -0.24
VMP1-203ENST00000586245 PNCKQ6P2M8 343 aa13.56□□□□□ -0.24
VMP1-203ENST00000586245 FAM151BQ6UXP7 276 aa13.56□□□□□ -0.24
VMP1-203ENST00000586245 ANKMY2Q8IV38 441 aa13.56□□□□□ -0.24
VMP1-203ENST00000586245 AGGF1Q8N302 714 aaeCLIP13.56□□□□□ -0.24
VMP1-203ENST00000586245 TRAM1L1Q8N609 369 aa13.56□□□□□ -0.24
VMP1-203ENST00000586245 TMEM145Q8NBT3 493 aa13.56□□□□□ -0.24
VMP1-203ENST00000586245 PIGKQ92643 395 aa13.56□□□□□ -0.24
VMP1-203ENST00000586245 SKA1Q96BD8 255 aa13.56□□□□□ -0.24
VMP1-203ENST00000586245 ZNF669Q96BR6 464 aaPredicted RBP13.56□□□□□ -0.24
VMP1-203ENST00000586245 CDKN2AIPNLQ96HQ2 116 aa13.56□□□□□ -0.24
VMP1-203ENST00000586245 ZNF778Q96MU6 729 aa13.56□□□□□ -0.24
VMP1-203ENST00000586245 SLC6A18Q96N87 628 aa13.56□□□□□ -0.24
VMP1-203ENST00000586245 ORAI3Q9BRQ5 295 aa13.56□□□□□ -0.24
VMP1-203ENST00000586245 SEMA4AQ9H3S1 761 aa13.56□□□□□ -0.24
VMP1-203ENST00000586245 TM9SF3Q9HD45 589 aa13.56□□□□□ -0.24
VMP1-203ENST00000586245 IL26Q9NPH9 171 aa13.56□□□□□ -0.24
VMP1-203ENST00000586245 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.56□□□□□ -0.24
VMP1-203ENST00000586245 NFU1Q9UMS0 254 aa13.56□□□□□ -0.24
VMP1-203ENST00000586245 SMG5Q9UPR3 1016 aaKnown RBP13.56□□□□□ -0.24
VMP1-203ENST00000586245 CHMP2BQ9UQN3 213 aa13.56□□□□□ -0.24
VMP1-203ENST00000586245 RPS6KL1Q9Y6S9 549 aa13.56□□□□□ -0.24
VMP1-203ENST00000586245 V9GYY5 206 aaPredicted RBP13.56□□□□□ -0.24
VMP1-203ENST00000586245 ATXN2Q99700 1313 aaKnown RBP13.56□□□□□ -0.24
VMP1-203ENST00000586245 THADAQ6YHU6 1953 aa13.56□□□□□ -0.24
VMP1-203ENST00000586245 A0A1B0GTW7 788 aa13.55□□□□□ -0.24
VMP1-203ENST00000586245 CCL22O00626 93 aa13.55□□□□□ -0.24
VMP1-203ENST00000586245 TOR1BO14657 336 aa13.55□□□□□ -0.24
VMP1-203ENST00000586245 BCAT2O15382 392 aaPredicted RBP13.55□□□□□ -0.24
VMP1-203ENST00000586245 SRP72O76094 671 aaKnown RBP13.55□□□□□ -0.24
VMP1-203ENST00000586245 USP1O94782 785 aa13.55□□□□□ -0.24
VMP1-203ENST00000586245 ITGALP20701 1170 aa13.55□□□□□ -0.24
VMP1-203ENST00000586245 PSMA3P25788 255 aa13.55□□□□□ -0.24
VMP1-203ENST00000586245 TEAD1P28347 426 aa13.55□□□□□ -0.24
VMP1-203ENST00000586245 CD38P28907 300 aa13.55□□□□□ -0.24
VMP1-203ENST00000586245 MC4RP32245 332 aa13.55□□□□□ -0.24
VMP1-203ENST00000586245 HOXD12P35452 270 aa13.55□□□□□ -0.24
VMP1-203ENST00000586245 ACVR1Q04771 509 aa13.55□□□□□ -0.24
VMP1-203ENST00000586245 CBLBQ13191 982 aa13.55□□□□□ -0.24
VMP1-203ENST00000586245 ITGA9Q13797 1035 aa13.55□□□□□ -0.24
VMP1-203ENST00000586245 INPP5AQ14642 412 aa13.55□□□□□ -0.24
VMP1-203ENST00000586245 TEAD4Q15561 434 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms