RNA–Protein interactions for RNA: ENST00000584655.5

RFFL-212, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 2 BASIC

Gene RFFL, Length 4,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-212ENST00000584655 THAP1Q9NVV9 213 aa10.26□□□□□ -0.77
RFFL-212ENST00000584655 TMEM248Q9NWD8 314 aa10.26□□□□□ -0.77
RFFL-212ENST00000584655 SAGE1Q9NXZ1 904 aa10.26□□□□□ -0.77
RFFL-212ENST00000584655 CLIC5Q9NZA1 410 aa10.26□□□□□ -0.77
RFFL-212ENST00000584655 TRMT6Q9UJA5 497 aaKnown RBP10.26□□□□□ -0.77
RFFL-212ENST00000584655 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.26□□□□□ -0.77
RFFL-212ENST00000584655 ANKRD66B4E2M5 251 aa10.26□□□□□ -0.77
RFFL-212ENST00000584655 CLDN11O75508 207 aa10.26□□□□□ -0.77
RFFL-212ENST00000584655 ITPKAP23677 461 aa10.26□□□□□ -0.77
RFFL-212ENST00000584655 PRKG2Q13237 762 aa10.26□□□□□ -0.77
RFFL-212ENST00000584655 ART3Q13508 389 aa10.26□□□□□ -0.77
RFFL-212ENST00000584655 CAPRIN1Q14444 709 aaKnown RBP10.26□□□□□ -0.77
RFFL-212ENST00000584655 CPSF6Q16630 551 aaKnown RBP eCLIP10.26□□□□□ -0.77
RFFL-212ENST00000584655 TMEM207Q6UWW9 146 aa10.26□□□□□ -0.77
RFFL-212ENST00000584655 TMEM150AQ86TG1 271 aa10.26□□□□□ -0.77
RFFL-212ENST00000584655 LILRA3Q8N6C8 439 aaPredicted RBP10.26□□□□□ -0.77
RFFL-212ENST00000584655 NSL1Q96IY1 281 aa10.26□□□□□ -0.77
RFFL-212ENST00000584655 MIPEPQ99797 713 aa10.26□□□□□ -0.77
RFFL-212ENST00000584655 TXLNGQ9NUQ3 528 aa10.26□□□□□ -0.77
RFFL-212ENST00000584655 TAS2R1Q9NYW7 299 aa10.26□□□□□ -0.77
RFFL-212ENST00000584655 EIF2B4Q9UI10 523 aaKnown RBP10.26□□□□□ -0.77
RFFL-212ENST00000584655 PNMA8BQ9ULN7 279 aaPredicted RBP10.26□□□□□ -0.77
RFFL-212ENST00000584655 UNC5CO95185 931 aa10.26□□□□□ -0.77
RFFL-212ENST00000584655 CEBPBP17676 345 aa10.26□□□□□ -0.77
RFFL-212ENST00000584655 SLC6A11P48066 632 aa10.26□□□□□ -0.77
RFFL-212ENST00000584655 C6orf10Q5SRN2 563 aa10.26□□□□□ -0.77
RFFL-212ENST00000584655 SEL1L3Q68CR1 1132 aa10.26□□□□□ -0.77
RFFL-212ENST00000584655 KCTD11Q693B1 232 aa10.26□□□□□ -0.77
RFFL-212ENST00000584655 SERPINA13PQ6UXR4 307 aa10.26□□□□□ -0.77
RFFL-212ENST00000584655 TDRPQ86YL5 185 aa10.26□□□□□ -0.77
RFFL-212ENST00000584655 PPFIBP2Q8ND30 876 aa10.26□□□□□ -0.77
RFFL-212ENST00000584655 OR10Q1Q8NGQ4 319 aa10.26□□□□□ -0.77
RFFL-212ENST00000584655 PTERQ96BW5 349 aa10.26□□□□□ -0.77
RFFL-212ENST00000584655 VAT1Q99536 393 aa10.26□□□□□ -0.77
RFFL-212ENST00000584655 NAT9Q9BTE0 207 aa10.26□□□□□ -0.77
RFFL-212ENST00000584655 DENND2DQ9H6A0 471 aaPredicted RBP10.26□□□□□ -0.77
RFFL-212ENST00000584655 MBD1Q9UIS9 605 aaPredicted RBP10.26□□□□□ -0.77
RFFL-212ENST00000584655 NEU3Q9UQ49 428 aa10.26□□□□□ -0.77
RFFL-212ENST00000584655 NR5A2O00482 541 aa10.25□□□□□ -0.77
RFFL-212ENST00000584655 STK25O00506 426 aa10.25□□□□□ -0.77
RFFL-212ENST00000584655 LRATO95237 230 aa10.25□□□□□ -0.77
RFFL-212ENST00000584655 C1QAP02745 245 aa10.25□□□□□ -0.77
RFFL-212ENST00000584655 EEF1DP29692 281 aaKnown RBP10.25□□□□□ -0.77
RFFL-212ENST00000584655 HOXC13P31276 330 aa10.25□□□□□ -0.77
RFFL-212ENST00000584655 HSPA7P48741 367 aa10.25□□□□□ -0.77
RFFL-212ENST00000584655 CCNHP51946 323 aaPredicted RBP10.25□□□□□ -0.77
RFFL-212ENST00000584655 CHRNA6Q15825 494 aa10.25□□□□□ -0.77
RFFL-212ENST00000584655 KHDC1Q4VXA5 237 aaKnown RBP10.25□□□□□ -0.77
RFFL-212ENST00000584655 MBLAC2Q68D91 279 aa10.25□□□□□ -0.77
RFFL-212ENST00000584655 GALNT4Q8N4A0 578 aa10.25□□□□□ -0.77
RFFL-212ENST00000584655 FAM13CQ8NE31 585 aa10.25□□□□□ -0.77
RFFL-212ENST00000584655 VWCEQ96DN2 955 aa10.25□□□□□ -0.77
RFFL-212ENST00000584655 DNMT3BQ9UBC3 853 aaKnown RBP10.25□□□□□ -0.77
RFFL-212ENST00000584655 STARD13Q9Y3M8 1113 aa10.25□□□□□ -0.77
RFFL-212ENST00000584655 TRANK1O15050 2925 aa10.25□□□□□ -0.77
RFFL-212ENST00000584655 LUC7L3O95232 432 aaKnown RBP10.25□□□□□ -0.77
RFFL-212ENST00000584655 SLC25A14O95258 325 aaPredicted RBP10.25□□□□□ -0.77
RFFL-212ENST00000584655 NDST3O95803 873 aa10.25□□□□□ -0.77
RFFL-212ENST00000584655 IGHA2P01877 340 aa10.25□□□□□ -0.77
RFFL-212ENST00000584655 T-ENOLP0DO92 83 aa10.25□□□□□ -0.77
RFFL-212ENST00000584655 SCNN1AP37088 669 aa10.25□□□□□ -0.77
RFFL-212ENST00000584655 SPDYCQ5MJ68 293 aa10.25□□□□□ -0.77
RFFL-212ENST00000584655 ASTLQ6HA08 431 aaPredicted RBP10.25□□□□□ -0.77
RFFL-212ENST00000584655 RETSATQ6NUM9 610 aa10.25□□□□□ -0.77
RFFL-212ENST00000584655 KDELC1Q6UW63 502 aa10.25□□□□□ -0.77
RFFL-212ENST00000584655 HERC6Q8IVU3 1022 aa10.25□□□□□ -0.77
RFFL-212ENST00000584655 UMODL1-AS1Q8N2C9 162 aa10.25□□□□□ -0.77
RFFL-212ENST00000584655 APBB2Q92870 758 aa10.25□□□□□ -0.77
RFFL-212ENST00000584655 RCN3Q96D15 328 aa10.25□□□□□ -0.77
RFFL-212ENST00000584655 MED8Q96G25 268 aa10.25□□□□□ -0.77
RFFL-212ENST00000584655 C2orf49Q9BVC5 232 aaPredicted RBP10.25□□□□□ -0.77
RFFL-212ENST00000584655 OSGEPL1Q9H4B0 414 aa10.25□□□□□ -0.77
RFFL-212ENST00000584655 KCNK13Q9HB14 408 aa10.25□□□□□ -0.77
RFFL-212ENST00000584655 HPS4Q9NQG7 708 aa10.25□□□□□ -0.77
RFFL-212ENST00000584655 TDP1Q9NUW8 608 aa10.25□□□□□ -0.77
RFFL-212ENST00000584655 INTS6Q9UL03 887 aaKnown RBP10.25□□□□□ -0.77
RFFL-212ENST00000584655 ASB1Q9Y576 335 aa10.25□□□□□ -0.77
RFFL-212ENST00000584655 ABHD14A-ACY1A0A1B0GW23 586 aa10.25□□□□□ -0.77
RFFL-212ENST00000584655 LDB2O43679 373 aa10.25□□□□□ -0.77
RFFL-212ENST00000584655 PCDH8O95206 1070 aa10.25□□□□□ -0.77
RFFL-212ENST00000584655 ATP6V1G2O95670 118 aa10.25□□□□□ -0.77
RFFL-212ENST00000584655 SERPIND1P05546 499 aa10.25□□□□□ -0.77
RFFL-212ENST00000584655 IDH3AP50213 366 aa10.25□□□□□ -0.77
RFFL-212ENST00000584655 CDH4P55283 916 aa10.25□□□□□ -0.77
RFFL-212ENST00000584655 SLC18A2Q05940 514 aa10.25□□□□□ -0.77
RFFL-212ENST00000584655 IL10RBQ08334 325 aa10.25□□□□□ -0.77
RFFL-212ENST00000584655 PPP1R8Q12972 351 aaKnown RBP10.25□□□□□ -0.77
RFFL-212ENST00000584655 MRPL58Q14197 206 aaKnown RBP10.25□□□□□ -0.77
RFFL-212ENST00000584655 ACOX1Q15067 660 aa10.25□□□□□ -0.77
RFFL-212ENST00000584655 SHHQ15465 462 aa10.25□□□□□ -0.77
RFFL-212ENST00000584655 GRAMD1BQ3KR37 738 aa10.25□□□□□ -0.77
RFFL-212ENST00000584655 LSM12Q3MHD2 195 aaKnown RBP10.25□□□□□ -0.77
RFFL-212ENST00000584655 FNDC3BQ53EP0 1204 aaKnown RBP10.25□□□□□ -0.77
RFFL-212ENST00000584655 TNFAIP8L3Q5GJ75 292 aa10.25□□□□□ -0.77
RFFL-212ENST00000584655 CXorf57Q6NSI4 855 aaKnown RBP10.25□□□□□ -0.77
RFFL-212ENST00000584655 UGT3A1Q6NUS8 523 aa10.25□□□□□ -0.77
RFFL-212ENST00000584655 CHST9Q7L1S5 443 aa10.25□□□□□ -0.77
RFFL-212ENST00000584655 SPATA24Q86W54 205 aa10.25□□□□□ -0.77
RFFL-212ENST00000584655 CILP2Q8IUL8 1156 aa10.25□□□□□ -0.77
RFFL-212ENST00000584655 ABHD8Q96I13 439 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms