RNA–Protein interactions for RNA: ENST00000577978.1

DDX42-205, Transcript of DEAD-box helicase 42, humanhuman

TSL 5

Gene DDX42, Length 581 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX42-205ENST00000577978 PPP1R2P41236 205 aa3.71□□□□□ -1.82
DDX42-205ENST00000577978 CDK7P50613 346 aa3.71□□□□□ -1.82
DDX42-205ENST00000577978 RASSF2P50749 326 aa3.71□□□□□ -1.82
DDX42-205ENST00000577978 DRG2P55039 364 aaKnown RBP3.71□□□□□ -1.82
DDX42-205ENST00000577978 PDE1BQ01064 536 aa3.71□□□□□ -1.82
DDX42-205ENST00000577978 PLOD1Q02809 727 aaPredicted RBP3.71□□□□□ -1.82
DDX42-205ENST00000577978 AP1B1Q10567 949 aa3.71□□□□□ -1.82
DDX42-205ENST00000577978 LMAN2Q12907 356 aa3.71□□□□□ -1.82
DDX42-205ENST00000577978 SAFBQ15424 915 aaKnown RBP eCLIP3.71□□□□□ -1.82
DDX42-205ENST00000577978 RBMS2Q15434 407 aaKnown RBP3.71□□□□□ -1.82
DDX42-205ENST00000577978 CNGA2Q16280 664 aa3.71□□□□□ -1.82
DDX42-205ENST00000577978 ASTE1Q2TB18 679 aaPredicted RBP3.71□□□□□ -1.82
DDX42-205ENST00000577978 KRT71Q3SY84 523 aa3.71□□□□□ -1.82
DDX42-205ENST00000577978 MIDNQ504T8 468 aa3.71□□□□□ -1.82
DDX42-205ENST00000577978 COBLL1Q53SF7 1204 aa3.71□□□□□ -1.82
DDX42-205ENST00000577978 HSP90AA4PQ58FG1 418 aa3.71□□□□□ -1.82
DDX42-205ENST00000577978 GALNT17Q6IS24 598 aa3.71□□□□□ -1.82
DDX42-205ENST00000577978 MARK2Q7KZI7 788 aaKnown RBP3.71□□□□□ -1.82
DDX42-205ENST00000577978 TAOK1Q7L7X3 1001 aa3.71□□□□□ -1.82
DDX42-205ENST00000577978 IRF2BP2Q7Z5L9 587 aa3.71□□□□□ -1.82
DDX42-205ENST00000577978 MICU3Q86XE3 530 aa3.71□□□□□ -1.82
DDX42-205ENST00000577978 CROCCP3Q8IVE0 287 aa3.71□□□□□ -1.82
DDX42-205ENST00000577978 IQCF2Q8IXL9 164 aa3.71□□□□□ -1.82
DDX42-205ENST00000577978 KIAA0319LQ8IZA0 1049 aa3.71□□□□□ -1.82
DDX42-205ENST00000577978 KBTBD3Q8NAB2 608 aa3.71□□□□□ -1.82
DDX42-205ENST00000577978 OR56A3Q8NH54 315 aa3.71□□□□□ -1.82
DDX42-205ENST00000577978 DNAJB14Q8TBM8 379 aa3.71□□□□□ -1.82
DDX42-205ENST00000577978 NAT14Q8WUY8 206 aa3.71□□□□□ -1.82
DDX42-205ENST00000577978 SYN2Q92777 582 aaPredicted RBP3.71□□□□□ -1.82
DDX42-205ENST00000577978 TRIM43Q96BQ3 446 aaPredicted RBP3.71□□□□□ -1.82
DDX42-205ENST00000577978 CTHRC1Q96CG8 243 aa3.71□□□□□ -1.82
DDX42-205ENST00000577978 CLMNQ96JQ2 1002 aa3.71□□□□□ -1.82
DDX42-205ENST00000577978 CCDC42Q96M95 316 aa3.71□□□□□ -1.82
DDX42-205ENST00000577978 NUDCD1Q96RS6 583 aa3.71□□□□□ -1.82
DDX42-205ENST00000577978 HNRNPABQ99729 332 aaKnown RBP3.71□□□□□ -1.82
DDX42-205ENST00000577978 ELAC2Q9BQ52 826 aaKnown RBP3.71□□□□□ -1.82
DDX42-205ENST00000577978 UBAC1Q9BSL1 405 aa3.71□□□□□ -1.82
DDX42-205ENST00000577978 TUBB6Q9BUF5 446 aa3.71□□□□□ -1.82
DDX42-205ENST00000577978 EFHD1Q9BUP0 239 aa3.71□□□□□ -1.82
DDX42-205ENST00000577978 LRRC2Q9BYS8 371 aa3.71□□□□□ -1.82
DDX42-205ENST00000577978 IFIH1Q9BYX4 1025 aaKnown RBP3.71□□□□□ -1.82
DDX42-205ENST00000577978 ROPN1BQ9BZX4 212 aaPredicted RBP3.71□□□□□ -1.82
DDX42-205ENST00000577978 ZCWPW1Q9H0M4 648 aa3.71□□□□□ -1.82
DDX42-205ENST00000577978 BOLA2Q9H3K6 86 aa3.71□□□□□ -1.82
DDX42-205ENST00000577978 ROPN1Q9HAT0 212 aaPredicted RBP3.71□□□□□ -1.82
DDX42-205ENST00000577978 SNX15Q9NRS6 342 aa3.71□□□□□ -1.82
DDX42-205ENST00000577978 INTS9Q9NV88 658 aaKnown RBP3.71□□□□□ -1.82
DDX42-205ENST00000577978 FAIMQ9NVQ4 179 aa3.71□□□□□ -1.82
DDX42-205ENST00000577978 NMRK1Q9NWW6 199 aa3.71□□□□□ -1.82
DDX42-205ENST00000577978 ZDHHC7Q9NXF8 308 aa3.71□□□□□ -1.82
DDX42-205ENST00000577978 QPCTLQ9NXS2 382 aa3.71□□□□□ -1.82
DDX42-205ENST00000577978 MTMR4Q9NYA4 1195 aa3.71□□□□□ -1.82
DDX42-205ENST00000577978 TAB2Q9NYJ8 693 aa3.71□□□□□ -1.82
DDX42-205ENST00000577978 WWOXQ9NZC7 414 aa3.71□□□□□ -1.82
DDX42-205ENST00000577978 ZNF212Q9UDV6 495 aa3.71□□□□□ -1.82
DDX42-205ENST00000577978 DNAJB4Q9UDY4 337 aa3.71□□□□□ -1.82
DDX42-205ENST00000577978 LRWD1Q9UFC0 647 aa3.71□□□□□ -1.82
DDX42-205ENST00000577978 SEC63Q9UGP8 760 aaKnown RBP3.71□□□□□ -1.82
DDX42-205ENST00000577978 LNPEPQ9UIQ6 1025 aa3.71□□□□□ -1.82
DDX42-205ENST00000577978 FBXL5Q9UKA1 691 aa3.71□□□□□ -1.82
DDX42-205ENST00000577978 TTC7AQ9ULT0 858 aaPredicted RBP3.71□□□□□ -1.82
DDX42-205ENST00000577978 RTL9Q8NET4 1388 aa3.71□□□□□ -1.82
DDX42-205ENST00000577978 EP300Q09472 2414 aaPredicted RBP3.71□□□□□ -1.82
DDX42-205ENST00000577978 PLXNA1Q9UIW2 1896 aa3.71□□□□□ -1.82
DDX42-205ENST00000577978 PRRC2BQ5JSZ5 2229 aaKnown RBP3.7□□□□□ -1.82
DDX42-205ENST00000577978 CCL15-CCL14A0A0B4J2E2 113 aa3.7□□□□□ -1.82
DDX42-205ENST00000577978 KLF18A0A0U1RQI7 1052 aa3.7□□□□□ -1.82
DDX42-205ENST00000577978 MACROD2A1Z1Q3 448 aa3.7□□□□□ -1.82
DDX42-205ENST00000577978 HTR3EA5X5Y0 456 aa3.7□□□□□ -1.82
DDX42-205ENST00000577978 IPO5O00410 1097 aaKnown RBP3.7□□□□□ -1.82
DDX42-205ENST00000577978 CD3EAPO15446 510 aaKnown RBP3.7□□□□□ -1.82
DDX42-205ENST00000577978 MAGEB2O15479 319 aa3.7□□□□□ -1.82
DDX42-205ENST00000577978 MOCS3O95396 460 aa3.7□□□□□ -1.82
DDX42-205ENST00000577978 LYNP07948 512 aa3.7□□□□□ -1.82
DDX42-205ENST00000577978 HSPD1P10809 573 aaKnown RBP3.7□□□□□ -1.82
DDX42-205ENST00000577978 APEHP13798 732 aaKnown RBP3.7□□□□□ -1.82
DDX42-205ENST00000577978 NBL1P41271 181 aa3.7□□□□□ -1.82
DDX42-205ENST00000577978 MATR3P43243 847 aaKnown RBP eCLIP3.7□□□□□ -1.82
DDX42-205ENST00000577978 MAGEA1P43355 309 aa3.7□□□□□ -1.82
DDX42-205ENST00000577978 RCAN1P53805 252 aa3.7□□□□□ -1.82
DDX42-205ENST00000577978 GEMIN4P57678 1058 aaKnown RBP3.7□□□□□ -1.82
DDX42-205ENST00000577978 TIRAPP58753 221 aa3.7□□□□□ -1.82
DDX42-205ENST00000577978 LINC00205P59089 165 aa3.7□□□□□ -1.82
DDX42-205ENST00000577978 XIAPP98170 497 aa3.7□□□□□ -1.82
DDX42-205ENST00000577978 POU5F1Q01860 360 aaKnown RBP3.7□□□□□ -1.82
DDX42-205ENST00000577978 SLC34A1Q06495 639 aa3.7□□□□□ -1.82
DDX42-205ENST00000577978 SRSF1Q07955 248 aaKnown RBP eCLIP3.7□□□□□ -1.82
DDX42-205ENST00000577978 CYLC2Q14093 348 aaPredicted RBP3.7□□□□□ -1.82
DDX42-205ENST00000577978 HNRNPDQ14103 355 aaKnown RBP3.7□□□□□ -1.82
DDX42-205ENST00000577978 TRIM29Q14134 588 aa3.7□□□□□ -1.82
DDX42-205ENST00000577978 GIT2Q14161 759 aa3.7□□□□□ -1.82
DDX42-205ENST00000577978 RCN2Q14257 317 aa3.7□□□□□ -1.82
DDX42-205ENST00000577978 KRT72Q14CN4 511 aa3.7□□□□□ -1.82
DDX42-205ENST00000577978 LARS2Q15031 903 aaKnown RBP3.7□□□□□ -1.82
DDX42-205ENST00000577978 CCL15Q16663 113 aa3.7□□□□□ -1.82
DDX42-205ENST00000577978 MTHFSDQ2M296 383 aaKnown RBP3.7□□□□□ -1.82
DDX42-205ENST00000577978 CCDC153Q494R4 210 aa3.7□□□□□ -1.82
DDX42-205ENST00000577978 CFAP157Q5JU67 520 aa3.7□□□□□ -1.82
DDX42-205ENST00000577978 C10orf76Q5T2E6 689 aa3.7□□□□□ -1.82
DDX42-205ENST00000577978 SYCP2LQ5T4T6 812 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms