RNA–Protein interactions for RNA: ENST00000574799.5

CCDC40-212, Transcript of coiled-coil domain containing 40, humanhuman

TSL 1 (best)

Gene CCDC40, Length 3,795 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-212ENST00000574799 CHRNB1P11230 501 aa9.57□□□□□ -0.88
CCDC40-212ENST00000574799 SLC26A2P50443 739 aa9.57□□□□□ -0.88
CCDC40-212ENST00000574799 SNX16P57768 344 aa9.57□□□□□ -0.88
CCDC40-212ENST00000574799 INAVAQ3KP66 663 aa9.57□□□□□ -0.88
CCDC40-212ENST00000574799 FAM183BPQ6ZVS7 135 aa9.57□□□□□ -0.88
CCDC40-212ENST00000574799 CATSPER4Q7RTX7 472 aa9.57□□□□□ -0.88
CCDC40-212ENST00000574799 SCML4Q8N228 414 aa9.57□□□□□ -0.88
CCDC40-212ENST00000574799 FAM167AQ96KS9 214 aa9.57□□□□□ -0.88
CCDC40-212ENST00000574799 NSMCE2Q96MF7 247 aa9.57□□□□□ -0.88
CCDC40-212ENST00000574799 ELOVL4Q9GZR5 314 aa9.57□□□□□ -0.88
CCDC40-212ENST00000574799 MUC3BQ9H195 1237 aa9.57□□□□□ -0.88
CCDC40-212ENST00000574799 CCM2LQ9NUG4 571 aaPredicted RBP9.57□□□□□ -0.88
CCDC40-212ENST00000574799 TCAF1Q9Y4C2 921 aa9.57□□□□□ -0.88
CCDC40-212ENST00000574799 COMMD10Q9Y6G5 202 aa9.57□□□□□ -0.88
CCDC40-212ENST00000574799 PATJQ8NI35 1801 aa9.57□□□□□ -0.88
CCDC40-212ENST00000574799 PTPRDP23468 1912 aa9.57□□□□□ -0.88
CCDC40-212ENST00000574799 A0A0J9YYE9 177 aa9.57□□□□□ -0.88
CCDC40-212ENST00000574799 A8MV72 311 aaPredicted RBP9.57□□□□□ -0.88
CCDC40-212ENST00000574799 TNFRSF10AO00220 468 aa9.57□□□□□ -0.88
CCDC40-212ENST00000574799 HBP1O60381 514 aa9.57□□□□□ -0.88
CCDC40-212ENST00000574799 GCATO75600 419 aa9.57□□□□□ -0.88
CCDC40-212ENST00000574799 ITIH1P19827 911 aa9.57□□□□□ -0.88
CCDC40-212ENST00000574799 VBP1P61758 197 aa9.57□□□□□ -0.88
CCDC40-212ENST00000574799 CHRNB3Q05901 458 aa9.57□□□□□ -0.88
CCDC40-212ENST00000574799 SLC36A3Q495N2 470 aa9.57□□□□□ -0.88
CCDC40-212ENST00000574799 CLEC6AQ6EIG7 209 aa9.57□□□□□ -0.88
CCDC40-212ENST00000574799 ALKAL1Q6UXT8 129 aa9.57□□□□□ -0.88
CCDC40-212ENST00000574799 PIWIL4Q7Z3Z4 852 aaKnown RBP9.57□□□□□ -0.88
CCDC40-212ENST00000574799 PIGZQ86VD9 579 aa9.57□□□□□ -0.88
CCDC40-212ENST00000574799 IQCF2Q8IXL9 164 aa9.57□□□□□ -0.88
CCDC40-212ENST00000574799 TRIM63Q969Q1 353 aa9.57□□□□□ -0.88
CCDC40-212ENST00000574799 NCLNQ969V3 563 aa9.57□□□□□ -0.88
CCDC40-212ENST00000574799 NXNL1Q96CM4 212 aa9.57□□□□□ -0.88
CCDC40-212ENST00000574799 ZHX1-C8orf76Q96EF9 292 aa9.57□□□□□ -0.88
CCDC40-212ENST00000574799 NODALQ96S42 347 aa9.57□□□□□ -0.88
CCDC40-212ENST00000574799 CENPOQ9BU64 300 aa9.57□□□□□ -0.88
CCDC40-212ENST00000574799 RPF1Q9H9Y2 349 aaKnown RBP9.57□□□□□ -0.88
CCDC40-212ENST00000574799 RPRD1BQ9NQG5 326 aaKnown RBP9.57□□□□□ -0.88
CCDC40-212ENST00000574799 EXD2Q9NVH0 621 aa9.57□□□□□ -0.88
CCDC40-212ENST00000574799 ERAP1Q9NZ08 941 aa9.57□□□□□ -0.88
CCDC40-212ENST00000574799 TEKT2Q9UIF3 430 aa9.57□□□□□ -0.88
CCDC40-212ENST00000574799 PDE10AQ9Y233 779 aa9.57□□□□□ -0.88
CCDC40-212ENST00000574799 TCRBV3S1A0A5B6 114 aa9.57□□□□□ -0.88
CCDC40-212ENST00000574799 HS6ST1O60243 411 aa9.57□□□□□ -0.88
CCDC40-212ENST00000574799 TOMM70O94826 608 aa9.57□□□□□ -0.88
CCDC40-212ENST00000574799 DBTP11182 482 aaKnown RBP9.57□□□□□ -0.88
CCDC40-212ENST00000574799 LCP1P13796 627 aa9.57□□□□□ -0.88
CCDC40-212ENST00000574799 YWHAQP27348 245 aa9.57□□□□□ -0.88
CCDC40-212ENST00000574799 HK2P52789 917 aa9.57□□□□□ -0.88
CCDC40-212ENST00000574799 TRAF3Q13114 568 aa9.57□□□□□ -0.88
CCDC40-212ENST00000574799 SURF1Q15526 300 aa9.57□□□□□ -0.88
CCDC40-212ENST00000574799 COLEC12Q5KU26 742 aa9.57□□□□□ -0.88
CCDC40-212ENST00000574799 PRAMEF19Q5SWL8 479 aa9.57□□□□□ -0.88
CCDC40-212ENST00000574799 INTS11Q5TA45 600 aaKnown RBP9.57□□□□□ -0.88
CCDC40-212ENST00000574799 SPRYD7Q5W111 196 aa9.57□□□□□ -0.88
CCDC40-212ENST00000574799 TTC23Q5W5X9 447 aa9.57□□□□□ -0.88
CCDC40-212ENST00000574799 FAAH2Q6GMR7 532 aa9.57□□□□□ -0.88
CCDC40-212ENST00000574799 MFSD2AQ8NA29 543 aa9.57□□□□□ -0.88
CCDC40-212ENST00000574799 SLCO4A1Q96BD0 722 aa9.57□□□□□ -0.88
CCDC40-212ENST00000574799 RABL2BQ9UNT1 228 aa9.57□□□□□ -0.88
CCDC40-212ENST00000574799 SPEF1Q9Y4P9 236 aa9.57□□□□□ -0.88
CCDC40-212ENST00000574799 THSD7BQ9C0I4 1608 aa9.56□□□□□ -0.88
CCDC40-212ENST00000574799 M0QX08 132 aa9.56□□□□□ -0.88
CCDC40-212ENST00000574799 SDHDO14521 159 aa9.56□□□□□ -0.88
CCDC40-212ENST00000574799 DLX3O60479 287 aa9.56□□□□□ -0.88
CCDC40-212ENST00000574799 THRBP10828 461 aa9.56□□□□□ -0.88
CCDC40-212ENST00000574799 HOXC8P31273 242 aa9.56□□□□□ -0.88
CCDC40-212ENST00000574799 ST13P50502 369 aaKnown RBP9.56□□□□□ -0.88
CCDC40-212ENST00000574799 KCNK10P57789 538 aa9.56□□□□□ -0.88
CCDC40-212ENST00000574799 YWHAHQ04917 246 aaPredicted RBP9.56□□□□□ -0.88
CCDC40-212ENST00000574799 TNK2Q07912 1038 aa9.56□□□□□ -0.88
CCDC40-212ENST00000574799 NIPAL4Q0D2K0 466 aa9.56□□□□□ -0.88
CCDC40-212ENST00000574799 BNIP2Q12982 314 aa9.56□□□□□ -0.88
CCDC40-212ENST00000574799 CAMK2BQ13554 666 aa9.56□□□□□ -0.88
CCDC40-212ENST00000574799 SEMA5AQ13591 1074 aa9.56□□□□□ -0.88
CCDC40-212ENST00000574799 TTLL4Q14679 1199 aa9.56□□□□□ -0.88
CCDC40-212ENST00000574799 ZBTB6Q15916 424 aa9.56□□□□□ -0.88
CCDC40-212ENST00000574799 TRIM60Q495X7 471 aa9.56□□□□□ -0.88
CCDC40-212ENST00000574799 CERCAMQ5T4B2 595 aa9.56□□□□□ -0.88
CCDC40-212ENST00000574799 USP43Q70EL4 1123 aa9.56□□□□□ -0.88
CCDC40-212ENST00000574799 TBC1D21Q8IYX1 336 aa9.56□□□□□ -0.88
CCDC40-212ENST00000574799 OR8H2Q8N162 312 aa9.56□□□□□ -0.88
CCDC40-212ENST00000574799 TRPV3Q8NET8 790 aa9.56□□□□□ -0.88
CCDC40-212ENST00000574799 OR7G1Q8NGA0 311 aa9.56□□□□□ -0.88
CCDC40-212ENST00000574799 OR13F1Q8NGS4 319 aa9.56□□□□□ -0.88
CCDC40-212ENST00000574799 IL12RB2Q99665 862 aa9.56□□□□□ -0.88
CCDC40-212ENST00000574799 SEZ6LQ9BYH1 1024 aa9.56□□□□□ -0.88
CCDC40-212ENST00000574799 ATP13A3Q9H7F0 1226 aa9.56□□□□□ -0.88
CCDC40-212ENST00000574799 VRTNQ9H8Y1 702 aa9.56□□□□□ -0.88
CCDC40-212ENST00000574799 FBRSL1Q9HCM7 1045 aaKnown RBP9.56□□□□□ -0.88
CCDC40-212ENST00000574799 STMN3Q9NZ72 180 aa9.56□□□□□ -0.88
CCDC40-212ENST00000574799 CCL15-CCL14A0A0B4J2E2 113 aa9.56□□□□□ -0.88
CCDC40-212ENST00000574799 AQP12BA6NM10 295 aa9.56□□□□□ -0.88
CCDC40-212ENST00000574799 NUAK1O60285 661 aa9.56□□□□□ -0.88
CCDC40-212ENST00000574799 RFPL2O75678 378 aa9.56□□□□□ -0.88
CCDC40-212ENST00000574799 TSPAN9O75954 239 aa9.56□□□□□ -0.88
CCDC40-212ENST00000574799 C1QAP02745 245 aa9.56□□□□□ -0.88
CCDC40-212ENST00000574799 ZNF865P0CJ78 1059 aaPredicted RBP9.56□□□□□ -0.88
CCDC40-212ENST00000574799 ENDOUP21128 410 aaKnown RBP9.56□□□□□ -0.88
CCDC40-212ENST00000574799 PTPN9P43378 593 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms