RNA–Protein interactions for RNA: ENST00000573936.5

CHD3-216, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 749 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-216ENST00000573936 RANBP10Q6VN20 620 aa11.01□□□□□ -0.65
CHD3-216ENST00000573936 SYT10Q6XYQ8 523 aa11.01□□□□□ -0.65
CHD3-216ENST00000573936 Q6ZVL8 140 aa11.01□□□□□ -0.65
CHD3-216ENST00000573936 TMC3Q7Z5M5 1100 aa11.01□□□□□ -0.65
CHD3-216ENST00000573936 LINC00523Q86TU6 105 aa11.01□□□□□ -0.65
CHD3-216ENST00000573936 SPATS2Q86XZ4 545 aaKnown RBP11.01□□□□□ -0.65
CHD3-216ENST00000573936 SLC25A41Q8N5S1 370 aa11.01□□□□□ -0.65
CHD3-216ENST00000573936 PRELID2Q8N945 189 aa11.01□□□□□ -0.65
CHD3-216ENST00000573936 GRK7Q8WTQ7 553 aa11.01□□□□□ -0.65
CHD3-216ENST00000573936 GATA6Q92908 595 aa11.01□□□□□ -0.65
CHD3-216ENST00000573936 TBL1YQ9BQ87 522 aa11.01□□□□□ -0.65
CHD3-216ENST00000573936 GORASP1Q9BQQ3 440 aa11.01□□□□□ -0.65
CHD3-216ENST00000573936 APOOQ9BUR5 198 aa11.01□□□□□ -0.65
CHD3-216ENST00000573936 ARNT2Q9HBZ2 717 aa11.01□□□□□ -0.65
CHD3-216ENST00000573936 GPR27Q9NS67 375 aa11.01□□□□□ -0.65
CHD3-216ENST00000573936 TM7SF3Q9NS93 570 aa11.01□□□□□ -0.65
CHD3-216ENST00000573936 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.01□□□□□ -0.65
CHD3-216ENST00000573936 ZNF711Q9Y462 761 aa11.01□□□□□ -0.65
CHD3-216ENST00000573936 NEUROG3Q9Y4Z2 214 aa11.01□□□□□ -0.65
CHD3-216ENST00000573936 ANKRD36A6QL64 1941 aa11.01□□□□□ -0.65
CHD3-216ENST00000573936 CELSR3Q9NYQ7 3312 aa11□□□□□ -0.65
CHD3-216ENST00000573936 PCDH15Q96QU1 1955 aa11□□□□□ -0.65
CHD3-216ENST00000573936 SPTY2D1-AS1A0A0U1RR47 76 aa11□□□□□ -0.65
CHD3-216ENST00000573936 E7EVH7 732 aa11□□□□□ -0.65
CHD3-216ENST00000573936 H3BM21 787 aa11□□□□□ -0.65
CHD3-216ENST00000573936 CACNB4O00305 520 aaPredicted RBP11□□□□□ -0.65
CHD3-216ENST00000573936 ZNF185O15231 689 aa11□□□□□ -0.65
CHD3-216ENST00000573936 HYAL3O43820 417 aaPredicted RBP11□□□□□ -0.65
CHD3-216ENST00000573936 TRIM16O95361 564 aa11□□□□□ -0.65
CHD3-216ENST00000573936 METTL18O95568 372 aa11□□□□□ -0.65
CHD3-216ENST00000573936 AP2A1O95782 977 aa11□□□□□ -0.65
CHD3-216ENST00000573936 C1SP09871 688 aa11□□□□□ -0.65
CHD3-216ENST00000573936 KELP23276 732 aa11□□□□□ -0.65
CHD3-216ENST00000573936 COILP38432 576 aaPredicted RBP11□□□□□ -0.65
CHD3-216ENST00000573936 GPR1P46091 355 aa11□□□□□ -0.65
CHD3-216ENST00000573936 KCNJ1P48048 391 aa11□□□□□ -0.65
CHD3-216ENST00000573936 SPINT3P49223 89 aa11□□□□□ -0.65
CHD3-216ENST00000573936 FNTAP49354 379 aa11□□□□□ -0.65
CHD3-216ENST00000573936 SIM1P81133 766 aaPredicted RBP11□□□□□ -0.65
CHD3-216ENST00000573936 PDE1BQ01064 536 aa11□□□□□ -0.65
CHD3-216ENST00000573936 NFATC4Q14934 902 aa11□□□□□ -0.65
CHD3-216ENST00000573936 PTPRRQ15256 657 aa11□□□□□ -0.65
CHD3-216ENST00000573936 INAVAQ3KP66 663 aa11□□□□□ -0.65
CHD3-216ENST00000573936 KCTD11Q693B1 232 aa11□□□□□ -0.65
CHD3-216ENST00000573936 RAET1GQ6H3X3 334 aa11□□□□□ -0.65
CHD3-216ENST00000573936 MACC1Q6ZN28 852 aa11□□□□□ -0.65
CHD3-216ENST00000573936 LYSMD3Q7Z3D4 306 aa11□□□□□ -0.65
CHD3-216ENST00000573936 PARGQ86W56 976 aa11□□□□□ -0.65
CHD3-216ENST00000573936 BTN2A2Q8WVV5 523 aa11□□□□□ -0.65
CHD3-216ENST00000573936 AP2M1Q96CW1 435 aa11□□□□□ -0.65
CHD3-216ENST00000573936 RUNDC3BQ96NL0 473 aa11□□□□□ -0.65
CHD3-216ENST00000573936 AP1M1Q9BXS5 423 aa11□□□□□ -0.65
CHD3-216ENST00000573936 ABCG8Q9H221 673 aa11□□□□□ -0.65
CHD3-216ENST00000573936 FAM83DQ9H4H8 585 aa11□□□□□ -0.65
CHD3-216ENST00000573936 ETNK1Q9HBU6 452 aa11□□□□□ -0.65
CHD3-216ENST00000573936 PHPT1Q9NRX4 125 aaPredicted RBP11□□□□□ -0.65
CHD3-216ENST00000573936 WASF3Q9UPY6 502 aa11□□□□□ -0.65
CHD3-216ENST00000573936 MSRB2Q9Y3D2 182 aa11□□□□□ -0.65
CHD3-216ENST00000573936 LOC400499M0QZD8 3231 aa11□□□□□ -0.65
CHD3-216ENST00000573936 PLXNA2O75051 1894 aa11□□□□□ -0.65
CHD3-216ENST00000573936 GOLGA8CPA6NN73 597 aa10.99□□□□□ -0.65
CHD3-216ENST00000573936 C2orf81A6NN90 581 aa10.99□□□□□ -0.65
CHD3-216ENST00000573936 KIF2AO00139 706 aaPredicted RBP10.99□□□□□ -0.65
CHD3-216ENST00000573936 AP3B1O00203 1094 aa10.99□□□□□ -0.65
CHD3-216ENST00000573936 PCDHGA12O60330 932 aa10.99□□□□□ -0.65
CHD3-216ENST00000573936 PHF2O75151 1096 aa10.99□□□□□ -0.65
CHD3-216ENST00000573936 PPFIA2O75334 1257 aa10.99□□□□□ -0.65
CHD3-216ENST00000573936 CRTAMO95727 393 aa10.99□□□□□ -0.65
CHD3-216ENST00000573936 GAS8O95995 478 aa10.99□□□□□ -0.65
CHD3-216ENST00000573936 TUBB4AP04350 444 aa10.99□□□□□ -0.65
CHD3-216ENST00000573936 PIRTP0C851 137 aa10.99□□□□□ -0.65
CHD3-216ENST00000573936 RPL22P35268 128 aaKnown RBP10.99□□□□□ -0.65
CHD3-216ENST00000573936 HMGCLP35914 325 aa10.99□□□□□ -0.65
CHD3-216ENST00000573936 BLKP51451 505 aa10.99□□□□□ -0.65
CHD3-216ENST00000573936 KIAA1024LP59773 190 aa10.99□□□□□ -0.65
CHD3-216ENST00000573936 DCDC1P59894 354 aa10.99□□□□□ -0.65
CHD3-216ENST00000573936 HNRNPKP61978 463 aaKnown RBP eCLIP10.99□□□□□ -0.652e-6■■■■□ 25.9
CHD3-216ENST00000573936 SEMA5AQ13591 1074 aa10.99□□□□□ -0.65
CHD3-216ENST00000573936 LAMB3Q13751 1172 aa10.99□□□□□ -0.65
CHD3-216ENST00000573936 TAF1AQ15573 450 aaPredicted RBP10.99□□□□□ -0.65
CHD3-216ENST00000573936 CCDC137Q6PK04 289 aaKnown RBP10.99□□□□□ -0.65
CHD3-216ENST00000573936 GLT6D1Q7Z4J2 308 aa10.99□□□□□ -0.65
CHD3-216ENST00000573936 PDCD7Q8N8D1 485 aaKnown RBP10.99□□□□□ -0.65
CHD3-216ENST00000573936 PLA2G15Q8NCC3 412 aa10.99□□□□□ -0.65
CHD3-216ENST00000573936 OR2I1PQ8NGU4 316 aa10.99□□□□□ -0.65
CHD3-216ENST00000573936 BRSK1Q8TDC3 778 aa10.99□□□□□ -0.65
CHD3-216ENST00000573936 BLOC1S5Q8TDH9 187 aa10.99□□□□□ -0.65
CHD3-216ENST00000573936 SMIM14Q96QK8 99 aa10.99□□□□□ -0.65
CHD3-216ENST00000573936 C19orf43Q9BQ61 176 aa10.99□□□□□ -0.65
CHD3-216ENST00000573936 WDR26Q9H7D7 661 aa10.99□□□□□ -0.65
CHD3-216ENST00000573936 IL21RQ9HBE5 538 aa10.99□□□□□ -0.65
CHD3-216ENST00000573936 RAB6BQ9NRW1 208 aa10.99□□□□□ -0.65
CHD3-216ENST00000573936 NFKBIL1Q9UBC1 381 aaPredicted RBP10.99□□□□□ -0.65
CHD3-216ENST00000573936 CD84Q9UIB8 345 aa10.99□□□□□ -0.65
CHD3-216ENST00000573936 SHOC2Q9UQ13 582 aa10.99□□□□□ -0.65
CHD3-216ENST00000573936 FNDC3AQ9Y2H6 1198 aaKnown RBP10.99□□□□□ -0.65
CHD3-216ENST00000573936 PKP3Q9Y446 797 aa10.99□□□□□ -0.65
CHD3-216ENST00000573936 TRPM6Q9BX84 2022 aa10.99□□□□□ -0.65
CHD3-216ENST00000573936 PCNX2A6NKB5 2137 aa10.99□□□□□ -0.65
CHD3-216ENST00000573936 A0A0U1RQS6 177 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms