RNA–Protein interactions for RNA: ENST00000569406.5

CLK3-226, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 3,591 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-226ENST00000569406 SEC24AO95486 1093 aa10.83□□□□□ -0.67
CLK3-226ENST00000569406 PIGRP01833 764 aa10.83□□□□□ -0.67
CLK3-226ENST00000569406 FCER2P06734 321 aa10.83□□□□□ -0.67
CLK3-226ENST00000569406 MFAP3P55082 362 aa10.83□□□□□ -0.67
CLK3-226ENST00000569406 RPP38P78345 283 aaKnown RBP10.83□□□□□ -0.67
CLK3-226ENST00000569406 FAM171BQ6P995 826 aa10.83□□□□□ -0.67
CLK3-226ENST00000569406 P3H2Q8IVL5 708 aa10.83□□□□□ -0.67
CLK3-226ENST00000569406 DSELQ8IZU8 1212 aa10.83□□□□□ -0.67
CLK3-226ENST00000569406 SLC7A14Q8TBB6 771 aa10.83□□□□□ -0.67
CLK3-226ENST00000569406 TNIP3Q96KP6 325 aa10.83□□□□□ -0.67
CLK3-226ENST00000569406 ANKRD60Q9BZ19 345 aa10.83□□□□□ -0.67
CLK3-226ENST00000569406 RANBP3Q9H6Z4 567 aaPredicted RBP10.83□□□□□ -0.67
CLK3-226ENST00000569406 GINS2Q9Y248 185 aa10.83□□□□□ -0.67
CLK3-226ENST00000569406 AP3D1O14617 1153 aa10.83□□□□□ -0.68
CLK3-226ENST00000569406 PRMT3O60678 531 aa10.83□□□□□ -0.68
CLK3-226ENST00000569406 ZNF780AO75290 641 aaPredicted RBP10.83□□□□□ -0.68
CLK3-226ENST00000569406 DGAT1O75907 488 aa10.83□□□□□ -0.68
CLK3-226ENST00000569406 APOA1P02647 267 aa10.83□□□□□ -0.68
CLK3-226ENST00000569406 RBP1P09455 135 aa10.83□□□□□ -0.68
CLK3-226ENST00000569406 SUPT20HL2P0C7V6 817 aa10.83□□□□□ -0.68
CLK3-226ENST00000569406 GP5P40197 560 aa10.83□□□□□ -0.68
CLK3-226ENST00000569406 GCNT1Q02742 428 aa10.83□□□□□ -0.68
CLK3-226ENST00000569406 MFSD13AQ14CX5 517 aa10.83□□□□□ -0.68
CLK3-226ENST00000569406 SUPT20HL1Q3ZLR7 823 aa10.83□□□□□ -0.68
CLK3-226ENST00000569406 BBS12Q6ZW61 710 aa10.83□□□□□ -0.68
CLK3-226ENST00000569406 NOXA1Q86UR1 476 aa10.83□□□□□ -0.68
CLK3-226ENST00000569406 TSPYL5Q86VY4 417 aaPredicted RBP10.83□□□□□ -0.68
CLK3-226ENST00000569406 STX12Q86Y82 276 aa10.83□□□□□ -0.68
CLK3-226ENST00000569406 UBR7Q8N806 425 aa10.83□□□□□ -0.68
CLK3-226ENST00000569406 FAM213AQ9BRX8 229 aa10.83□□□□□ -0.68
CLK3-226ENST00000569406 BDH2Q9BUT1 245 aa10.83□□□□□ -0.68
CLK3-226ENST00000569406 CCDC59Q9P031 241 aaKnown RBP10.83□□□□□ -0.68
CLK3-226ENST00000569406 SAC3D1A6NKF1 404 aa10.83□□□□□ -0.68
CLK3-226ENST00000569406 TNFRSF21O75509 655 aa10.83□□□□□ -0.68
CLK3-226ENST00000569406 CYP2A6P11509 494 aaPredicted RBP10.83□□□□□ -0.68
CLK3-226ENST00000569406 MSH3P20585 1137 aa10.83□□□□□ -0.68
CLK3-226ENST00000569406 GTF2E2P29084 291 aaKnown RBP10.83□□□□□ -0.68
CLK3-226ENST00000569406 HTR7P34969 479 aa10.83□□□□□ -0.68
CLK3-226ENST00000569406 GPC1P35052 558 aa10.83□□□□□ -0.68
CLK3-226ENST00000569406 CAV1Q03135 178 aa10.83□□□□□ -0.68
CLK3-226ENST00000569406 CLEC16AQ2KHT3 1053 aa10.83□□□□□ -0.68
CLK3-226ENST00000569406 TMEM236Q5W0B7 351 aa10.83□□□□□ -0.68
CLK3-226ENST00000569406 PAGE2Q7Z2X7 111 aa10.83□□□□□ -0.68
CLK3-226ENST00000569406 POLNQ7Z5Q5 900 aa10.83□□□□□ -0.68
CLK3-226ENST00000569406 TMEM126BQ8IUX1 230 aa10.83□□□□□ -0.68
CLK3-226ENST00000569406 LYSMD2Q8IV50 215 aa10.83□□□□□ -0.68
CLK3-226ENST00000569406 FAM156AQ8NDB6 213 aa10.83□□□□□ -0.68
CLK3-226ENST00000569406 TMEM143Q96AN5 459 aa10.83□□□□□ -0.68
CLK3-226ENST00000569406 LRRC39Q96DD0 335 aa10.83□□□□□ -0.68
CLK3-226ENST00000569406 APOPT1Q96IL0 206 aa10.83□□□□□ -0.68
CLK3-226ENST00000569406 FAM126AQ9BYI3 521 aaPredicted RBP10.83□□□□□ -0.68
CLK3-226ENST00000569406 POLR3FQ9H1D9 316 aaPredicted RBP10.83□□□□□ -0.68
CLK3-226ENST00000569406 PORCNQ9H237 461 aa10.83□□□□□ -0.68
CLK3-226ENST00000569406 NOL11Q9H8H0 719 aaKnown RBP10.83□□□□□ -0.68
CLK3-226ENST00000569406 TSR3Q9UJK0 312 aaKnown RBP10.83□□□□□ -0.68
CLK3-226ENST00000569406 BAG5Q9UL15 447 aa10.83□□□□□ -0.68
CLK3-226ENST00000569406 CNTN6Q9UQ52 1028 aa10.83□□□□□ -0.68
CLK3-226ENST00000569406 SOWAHBA6NEL2 793 aa10.82□□□□□ -0.68
CLK3-226ENST00000569406 GMDSO60547 372 aa10.82□□□□□ -0.68
CLK3-226ENST00000569406 CNMDO75829 334 aa10.82□□□□□ -0.68
CLK3-226ENST00000569406 ALOX12P18054 663 aa10.82□□□□□ -0.68
CLK3-226ENST00000569406 TNNI1P19237 187 aa10.82□□□□□ -0.68
CLK3-226ENST00000569406 POU3F3P20264 500 aaPredicted RBP10.82□□□□□ -0.68
CLK3-226ENST00000569406 BAG6P46379 1132 aa10.82□□□□□ -0.68
CLK3-226ENST00000569406 NUBP1P53384 320 aa10.82□□□□□ -0.68
CLK3-226ENST00000569406 AQP6Q13520 282 aa10.82□□□□□ -0.68
CLK3-226ENST00000569406 STEAP3Q658P3 488 aa10.82□□□□□ -0.68
CLK3-226ENST00000569406 TYW3Q6IPR3 259 aaKnown RBP10.82□□□□□ -0.68
CLK3-226ENST00000569406 GPD1LQ8N335 351 aa10.82□□□□□ -0.68
CLK3-226ENST00000569406 TMEM102Q8N9M5 508 aaPredicted RBP10.82□□□□□ -0.68
CLK3-226ENST00000569406 TDRD5Q8NAT2 981 aaKnown RBP10.82□□□□□ -0.68
CLK3-226ENST00000569406 TFB1MQ8WVM0 346 aaKnown RBP10.82□□□□□ -0.68
CLK3-226ENST00000569406 SLC5A11Q8WWX8 675 aa10.82□□□□□ -0.68
CLK3-226ENST00000569406 PROX1Q92786 737 aa10.82□□□□□ -0.68
CLK3-226ENST00000569406 NCLNQ969V3 563 aa10.82□□□□□ -0.68
CLK3-226ENST00000569406 E2F7Q96AV8 911 aa10.82□□□□□ -0.68
CLK3-226ENST00000569406 FOPNLQ96NB1 174 aa10.82□□□□□ -0.68
CLK3-226ENST00000569406 TMEM245Q9H330 911 aa10.82□□□□□ -0.68
CLK3-226ENST00000569406 TINAGQ9UJW2 476 aa10.82□□□□□ -0.68
CLK3-226ENST00000569406 ITGA11Q9UKX5 1188 aa10.82□□□□□ -0.68
CLK3-226ENST00000569406 POLIQ9UNA4 740 aa10.82□□□□□ -0.68
CLK3-226ENST00000569406 XYLBO75191 536 aa10.82□□□□□ -0.68
CLK3-226ENST00000569406 IVDP26440 423 aa10.82□□□□□ -0.68
CLK3-226ENST00000569406 KPNA2P52292 529 aaKnown RBP10.82□□□□□ -0.68
CLK3-226ENST00000569406 LBX2Q6XYB7 198 aa10.82□□□□□ -0.68
CLK3-226ENST00000569406 ZCCHC23Q6ZST2 131 aa10.82□□□□□ -0.68
CLK3-226ENST00000569406 FAM124AQ86V42 546 aa10.82□□□□□ -0.68
CLK3-226ENST00000569406 MFSD4AQ8N468 514 aa10.82□□□□□ -0.68
CLK3-226ENST00000569406 NKD2Q969F2 451 aaPredicted RBP10.82□□□□□ -0.68
CLK3-226ENST00000569406 FYTTD1Q96QD9 318 aaKnown RBP10.82□□□□□ -0.68
CLK3-226ENST00000569406 NIFKQ9BYG3 293 aaKnown RBP10.82□□□□□ -0.68
CLK3-226ENST00000569406 ROGDIQ9GZN7 287 aa10.82□□□□□ -0.68
CLK3-226ENST00000569406 C2orf40Q9H1Z8 148 aa10.82□□□□□ -0.68
CLK3-226ENST00000569406 COPS3Q9UNS2 423 aa10.82□□□□□ -0.68
CLK3-226ENST00000569406 AGTPBP1Q9UPW5 1226 aa10.82□□□□□ -0.68
CLK3-226ENST00000569406 HRH3Q9Y5N1 445 aa10.82□□□□□ -0.68
CLK3-226ENST00000569406 A0A0B4J269 797 aa10.82□□□□□ -0.68
CLK3-226ENST00000569406 E5RI56 91 aa10.82□□□□□ -0.68
CLK3-226ENST00000569406 AKAP10O43572 662 aa10.82□□□□□ -0.68
CLK3-226ENST00000569406 DCXO43602 365 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 545.8 ms