RNA–Protein interactions for RNA: ENST00000569144.5

CDH13-212, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-212ENST00000569144 TBC1D30Q9Y2I9 924 aa5.93□□□□□ -1.46
CDH13-212ENST00000569144 CACNA1DQ01668 2161 aa5.93□□□□□ -1.46
CDH13-212ENST00000569144 SDK2Q58EX2 2172 aa5.92□□□□□ -1.46
CDH13-212ENST00000569144 IGHV5-10-1A0A0J9YXX1 117 aa5.92□□□□□ -1.46
CDH13-212ENST00000569144 B4E171 279 aa5.92□□□□□ -1.46
CDH13-212ENST00000569144 M0QYV0 167 aa5.92□□□□□ -1.46
CDH13-212ENST00000569144 B4GAT1O43505 415 aa5.92□□□□□ -1.46
CDH13-212ENST00000569144 CALUO43852 315 aaPredicted RBP5.92□□□□□ -1.46
CDH13-212ENST00000569144 ZNF821O75541 412 aaPredicted RBP5.92□□□□□ -1.46
CDH13-212ENST00000569144 CLEC3AO75596 197 aa5.92□□□□□ -1.46
CDH13-212ENST00000569144 TM7SF2O76062 418 aa5.92□□□□□ -1.46
CDH13-212ENST00000569144 TRUB2O95900 331 aaKnown RBP5.92□□□□□ -1.46
CDH13-212ENST00000569144 SLC2A3P11169 496 aa5.92□□□□□ -1.46
CDH13-212ENST00000569144 PDCP20941 246 aa5.92□□□□□ -1.46
CDH13-212ENST00000569144 HTR1BP28222 390 aa5.92□□□□□ -1.46
CDH13-212ENST00000569144 CASP1P29466 404 aa5.92□□□□□ -1.46
CDH13-212ENST00000569144 GTF2H1P32780 548 aa5.92□□□□□ -1.46
CDH13-212ENST00000569144 CCNFP41002 786 aa5.92□□□□□ -1.46
CDH13-212ENST00000569144 TSPAN7P41732 249 aa5.92□□□□□ -1.46
CDH13-212ENST00000569144 NASPP49321 788 aaPredicted RBP5.92□□□□□ -1.46
CDH13-212ENST00000569144 MXI1P50539 228 aa5.92□□□□□ -1.46
CDH13-212ENST00000569144 CCNHP51946 323 aaPredicted RBP5.92□□□□□ -1.46
CDH13-212ENST00000569144 LIMK2P53671 638 aa5.92□□□□□ -1.46
CDH13-212ENST00000569144 CDH4P55283 916 aa5.92□□□□□ -1.46
CDH13-212ENST00000569144 SRP54P61011 504 aaKnown RBP5.92□□□□□ -1.46
CDH13-212ENST00000569144 YWHAEP62258 255 aaKnown RBP5.92□□□□□ -1.46
CDH13-212ENST00000569144 ABHD18Q0P651 414 aa5.92□□□□□ -1.46
CDH13-212ENST00000569144 STK4Q13043 487 aa5.92□□□□□ -1.46
CDH13-212ENST00000569144 MTA1Q13330 715 aa5.92□□□□□ -1.46
CDH13-212ENST00000569144 CUL2Q13617 745 aa5.92□□□□□ -1.46
CDH13-212ENST00000569144 NFATC4Q14934 902 aa5.92□□□□□ -1.46
CDH13-212ENST00000569144 SLC39A14Q15043 492 aa5.92□□□□□ -1.46
CDH13-212ENST00000569144 TCEA2Q15560 299 aa5.92□□□□□ -1.46
CDH13-212ENST00000569144 NFIL3Q16649 462 aa5.92□□□□□ -1.46
CDH13-212ENST00000569144 EIF2S3LQ2VIR3 472 aaKnown RBP5.92□□□□□ -1.46
CDH13-212ENST00000569144 EDRF1Q3B7T1 1238 aa5.92□□□□□ -1.46
CDH13-212ENST00000569144 C5orf22Q49AR2 442 aa5.92□□□□□ -1.46
CDH13-212ENST00000569144 DCAF12Q5T6F0 453 aa5.92□□□□□ -1.46
CDH13-212ENST00000569144 LSRQ86X29 649 aaPredicted RBP5.92□□□□□ -1.46
CDH13-212ENST00000569144 PCDH20Q8N6Y1 951 aaKnown RBP5.92□□□□□ -1.46
CDH13-212ENST00000569144 KIAA0895Q8NCT3 520 aa5.92□□□□□ -1.46
CDH13-212ENST00000569144 FBXL13Q8NEE6 735 aa5.92□□□□□ -1.46
CDH13-212ENST00000569144 ATL2Q8NHH9 583 aa5.92□□□□□ -1.46
CDH13-212ENST00000569144 FAM149B1Q96BN6 582 aa5.92□□□□□ -1.46
CDH13-212ENST00000569144 ARHGEF26Q96DR7 871 aa5.92□□□□□ -1.46
CDH13-212ENST00000569144 TCTN2Q96GX1 697 aa5.92□□□□□ -1.46
CDH13-212ENST00000569144 TM9SF2Q99805 663 aa5.92□□□□□ -1.46
CDH13-212ENST00000569144 NUDT22Q9BRQ3 303 aa5.92□□□□□ -1.46
CDH13-212ENST00000569144 SPRY4Q9C004 299 aa5.92□□□□□ -1.46
CDH13-212ENST00000569144 MIS12Q9H081 205 aa5.92□□□□□ -1.46
CDH13-212ENST00000569144 BLZF1Q9H2G9 400 aa5.92□□□□□ -1.46
CDH13-212ENST00000569144 UPF2Q9HAU5 1272 aaKnown RBP5.92□□□□□ -1.46
CDH13-212ENST00000569144 MBNL1Q9NR56 388 aaKnown RBP5.92□□□□□ -1.46
CDH13-212ENST00000569144 MBNL3Q9NUK0 354 aaKnown RBP5.92□□□□□ -1.46
CDH13-212ENST00000569144 GPATCH2Q9NW75 528 aa5.92□□□□□ -1.46
CDH13-212ENST00000569144 SLC39A1Q9NY26 324 aa5.92□□□□□ -1.46
CDH13-212ENST00000569144 KLQ9UEF7 1012 aa5.92□□□□□ -1.46
CDH13-212ENST00000569144 ERRFI1Q9UJM3 462 aaPredicted RBP5.92□□□□□ -1.46
CDH13-212ENST00000569144 ADAMTS6Q9UKP5 1117 aa5.92□□□□□ -1.46
CDH13-212ENST00000569144 VANGL2Q9ULK5 521 aa5.92□□□□□ -1.46
CDH13-212ENST00000569144 TRAF3IP3Q9Y228 551 aa5.92□□□□□ -1.46
CDH13-212ENST00000569144 ITM2BQ9Y287 266 aa5.92□□□□□ -1.46
CDH13-212ENST00000569144 CRYBG3Q68DQ2 2970 aa5.92□□□□□ -1.46
CDH13-212ENST00000569144 ZFHX3Q15911 3703 aa5.92□□□□□ -1.46
CDH13-212ENST00000569144 C16orf96A6NNT2 1141 aa5.91□□□□□ -1.46
CDH13-212ENST00000569144 B4DGG1 531 aa5.91□□□□□ -1.46
CDH13-212ENST00000569144 AREL1O15033 823 aa5.91□□□□□ -1.46
CDH13-212ENST00000569144 ZW10O43264 779 aa5.91□□□□□ -1.46
CDH13-212ENST00000569144 HNRNPRO43390 633 aaKnown RBP5.91□□□□□ -1.46
CDH13-212ENST00000569144 RFPL1O75677 317 aa5.91□□□□□ -1.46
CDH13-212ENST00000569144 SORBS2O94875 1100 aaKnown RBP5.91□□□□□ -1.46
CDH13-212ENST00000569144 ENDOD1O94919 500 aa5.91□□□□□ -1.46
CDH13-212ENST00000569144 TNFP01375 233 aa5.91□□□□□ -1.46
CDH13-212ENST00000569144 RNASE1P07998 156 aaKnown RBP5.91□□□□□ -1.46
CDH13-212ENST00000569144 RHOCP08134 193 aa5.91□□□□□ -1.46
CDH13-212ENST00000569144 PAEPP09466 180 aa5.91□□□□□ -1.46
CDH13-212ENST00000569144 THRAP10827 490 aa5.91□□□□□ -1.46
CDH13-212ENST00000569144 NR2F2P24468 414 aa5.91□□□□□ -1.46
CDH13-212ENST00000569144 TPP2P29144 1249 aaPredicted RBP5.91□□□□□ -1.46
CDH13-212ENST00000569144 CCR1P32246 355 aa5.91□□□□□ -1.46
CDH13-212ENST00000569144 CSTF2P33240 577 aaKnown RBP eCLIP5.91□□□□□ -1.46
CDH13-212ENST00000569144 MAN1A1P33908 653 aa5.91□□□□□ -1.46
CDH13-212ENST00000569144 PSMC2P35998 433 aaKnown RBP5.91□□□□□ -1.46
CDH13-212ENST00000569144 RPL34P49207 117 aaKnown RBP5.91□□□□□ -1.46
CDH13-212ENST00000569144 SERPINH1P50454 418 aaKnown RBP5.91□□□□□ -1.46
CDH13-212ENST00000569144 PITX1P78337 314 aaPredicted RBP5.91□□□□□ -1.46
CDH13-212ENST00000569144 MRPL49Q13405 166 aaKnown RBP5.91□□□□□ -1.46
CDH13-212ENST00000569144 CUL4BQ13620 913 aa5.91□□□□□ -1.46
CDH13-212ENST00000569144 AUHQ13825 339 aaKnown RBP5.91□□□□□ -1.46
CDH13-212ENST00000569144 NR1D2Q14995 579 aa5.91□□□□□ -1.46
CDH13-212ENST00000569144 IRF4Q15306 451 aa5.91□□□□□ -1.46
CDH13-212ENST00000569144 STILQ15468 1287 aa5.91□□□□□ -1.46
CDH13-212ENST00000569144 CNGA2Q16280 664 aa5.91□□□□□ -1.46
CDH13-212ENST00000569144 AMZ1Q400G9 498 aa5.91□□□□□ -1.46
CDH13-212ENST00000569144 ZNF805Q5CZA5 627 aa5.91□□□□□ -1.46
CDH13-212ENST00000569144 CARD16Q5EG05 197 aa5.91□□□□□ -1.46
CDH13-212ENST00000569144 ATP1A1-AS1Q5TC04 95 aa5.91□□□□□ -1.46
CDH13-212ENST00000569144 ANKS6Q68DC2 871 aa5.91□□□□□ -1.46
CDH13-212ENST00000569144 SPECC1LQ69YQ0 1117 aa5.91□□□□□ -1.46
CDH13-212ENST00000569144 RETSATQ6NUM9 610 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms