RNA–Protein interactions for RNA: ENST00000566550.1

HERPUD1-211, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 511 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-211ENST00000566550 CLDN2P57739 230 aa3.36□□□□□ -1.87
HERPUD1-211ENST00000566550 KIAA1024LP59773 190 aa3.36□□□□□ -1.87
HERPUD1-211ENST00000566550 WDR5P61964 334 aaKnown RBP3.36□□□□□ -1.87
HERPUD1-211ENST00000566550 GPC5P78333 572 aa3.36□□□□□ -1.87
HERPUD1-211ENST00000566550 PPP2R2BQ00005 443 aa3.36□□□□□ -1.87
HERPUD1-211ENST00000566550 SORDQ00796 357 aa3.36□□□□□ -1.87
HERPUD1-211ENST00000566550 GALK2Q01415 458 aa3.36□□□□□ -1.87
HERPUD1-211ENST00000566550 PRKCEQ02156 737 aa3.36□□□□□ -1.87
HERPUD1-211ENST00000566550 ACSM1Q08AH1 577 aa3.36□□□□□ -1.87
HERPUD1-211ENST00000566550 SGCGQ13326 291 aa3.36□□□□□ -1.87
HERPUD1-211ENST00000566550 KARSQ15046 597 aaKnown RBP3.36□□□□□ -1.87
HERPUD1-211ENST00000566550 CNGA3Q16281 694 aa3.36□□□□□ -1.87
HERPUD1-211ENST00000566550 TWISTNBQ3B726 338 aaPredicted RBP3.36□□□□□ -1.87
HERPUD1-211ENST00000566550 PCGF3Q3KNV8 242 aa3.36□□□□□ -1.87
HERPUD1-211ENST00000566550 CDONQ4KMG0 1287 aa3.36□□□□□ -1.87
HERPUD1-211ENST00000566550 PDCD4Q53EL6 469 aaKnown RBP3.36□□□□□ -1.87
HERPUD1-211ENST00000566550 GLE1Q53GS7 698 aaKnown RBP3.36□□□□□ -1.87
HERPUD1-211ENST00000566550 MDH1BQ5I0G3 518 aa3.36□□□□□ -1.87
HERPUD1-211ENST00000566550 DNTTIP2Q5QJE6 756 aaKnown RBP3.36□□□□□ -1.87
HERPUD1-211ENST00000566550 TTC39AQ5SRH9 613 aa3.36□□□□□ -1.87
HERPUD1-211ENST00000566550 SPOUT1Q5T280 376 aaKnown RBP3.36□□□□□ -1.87
HERPUD1-211ENST00000566550 CCDC183Q5T5S1 534 aa3.36□□□□□ -1.87
HERPUD1-211ENST00000566550 C12orf60Q5U649 245 aa3.36□□□□□ -1.87
HERPUD1-211ENST00000566550 SHEQ5VZ18 495 aa3.36□□□□□ -1.87
HERPUD1-211ENST00000566550 SLFN13Q68D06 897 aa3.36□□□□□ -1.87
HERPUD1-211ENST00000566550 PMS2CLQ68D20 193 aa3.36□□□□□ -1.87
HERPUD1-211ENST00000566550 IRGCQ6NXR0 463 aa3.36□□□□□ -1.87
HERPUD1-211ENST00000566550 MFSD7Q6UXD7 560 aa3.36□□□□□ -1.87
HERPUD1-211ENST00000566550 QSOX2Q6ZRP7 698 aa3.36□□□□□ -1.87
HERPUD1-211ENST00000566550 C11orf57Q6ZUT1 292 aaPredicted RBP3.36□□□□□ -1.87
HERPUD1-211ENST00000566550 PTCHD4Q6ZW05 846 aa3.36□□□□□ -1.87
HERPUD1-211ENST00000566550 MIER3Q7Z3K6 550 aa3.36□□□□□ -1.87
HERPUD1-211ENST00000566550 HAUS6Q7Z4H7 955 aa3.36□□□□□ -1.87
HERPUD1-211ENST00000566550 MDGA2Q7Z553 956 aa3.36□□□□□ -1.87
HERPUD1-211ENST00000566550 SPRED1Q7Z699 444 aa3.36□□□□□ -1.87
HERPUD1-211ENST00000566550 ARHGAP30Q7Z6I6 1101 aaPredicted RBP3.36□□□□□ -1.87
HERPUD1-211ENST00000566550 NEK8Q86SG6 692 aa3.36□□□□□ -1.87
HERPUD1-211ENST00000566550 HAPLN4Q86UW8 402 aa3.36□□□□□ -1.87
HERPUD1-211ENST00000566550 ARID3BQ8IVW6 561 aaPredicted RBP3.36□□□□□ -1.87
HERPUD1-211ENST00000566550 FAM219AQ8IW50 185 aa3.36□□□□□ -1.87
HERPUD1-211ENST00000566550 KBTBD2Q8IY47 623 aa3.36□□□□□ -1.87
HERPUD1-211ENST00000566550 AFAP1Q8N556 730 aa3.36□□□□□ -1.87
HERPUD1-211ENST00000566550 ZCCHC9Q8N567 271 aaKnown RBP3.36□□□□□ -1.87
HERPUD1-211ENST00000566550 MRPL43Q8N983 215 aaKnown RBP3.36□□□□□ -1.87
HERPUD1-211ENST00000566550 TXNDC5Q8NBS9 432 aaKnown RBP3.36□□□□□ -1.87
HERPUD1-211ENST00000566550 CNNM3Q8NE01 707 aa3.36□□□□□ -1.87
HERPUD1-211ENST00000566550 DBF4BQ8NFT6 615 aa3.36□□□□□ -1.87
HERPUD1-211ENST00000566550 OR7G3Q8NG95 312 aa3.36□□□□□ -1.87
HERPUD1-211ENST00000566550 OR8K5Q8NH50 307 aa3.36□□□□□ -1.87
HERPUD1-211ENST00000566550 IP6K1Q92551 441 aa3.36□□□□□ -1.87
HERPUD1-211ENST00000566550 ST6GALNAC6Q969X2 333 aa3.36□□□□□ -1.87
HERPUD1-211ENST00000566550 LRRC59Q96AG4 307 aaKnown RBP3.36□□□□□ -1.87
HERPUD1-211ENST00000566550 FKBP10Q96AY3 582 aa3.36□□□□□ -1.87
HERPUD1-211ENST00000566550 CNDP1Q96KN2 507 aa3.36□□□□□ -1.87
HERPUD1-211ENST00000566550 TMEM68Q96MH6 324 aa3.36□□□□□ -1.87
HERPUD1-211ENST00000566550 UROC1Q96N76 676 aa3.36□□□□□ -1.87
HERPUD1-211ENST00000566550 CAMK1GQ96NX5 476 aa3.36□□□□□ -1.87
HERPUD1-211ENST00000566550 OR14A2Q96R54 314 aa3.36□□□□□ -1.87
HERPUD1-211ENST00000566550 TEX101Q9BY14 249 aa3.36□□□□□ -1.87
HERPUD1-211ENST00000566550 OSBPL8Q9BZF1 889 aa3.36□□□□□ -1.87
HERPUD1-211ENST00000566550 RTN4RQ9BZR6 473 aa3.36□□□□□ -1.87
HERPUD1-211ENST00000566550 TRIM2Q9C040 744 aa3.36□□□□□ -1.87
HERPUD1-211ENST00000566550 SLCO5A1Q9H2Y9 848 aa3.36□□□□□ -1.87
HERPUD1-211ENST00000566550 MMRN2Q9H8L6 949 aa3.36□□□□□ -1.87
HERPUD1-211ENST00000566550 EPB41L5Q9HCM4 733 aa3.36□□□□□ -1.87
HERPUD1-211ENST00000566550 TUFT1Q9NNX1 390 aa3.36□□□□□ -1.87
HERPUD1-211ENST00000566550 SLC35D1Q9NTN3 355 aa3.36□□□□□ -1.87
HERPUD1-211ENST00000566550 ASNSD1Q9NWL6 643 aa3.36□□□□□ -1.87
HERPUD1-211ENST00000566550 P4HTMQ9NXG6 502 aa3.36□□□□□ -1.87
HERPUD1-211ENST00000566550 CYP39A1Q9NYL5 469 aa3.36□□□□□ -1.87
HERPUD1-211ENST00000566550 CWC15Q9P013 229 aaKnown RBP3.36□□□□□ -1.87
HERPUD1-211ENST00000566550 OAZ3Q9UMX2 235 aa3.36□□□□□ -1.87
HERPUD1-211ENST00000566550 ICKQ9UPZ9 632 aa3.36□□□□□ -1.87
HERPUD1-211ENST00000566550 SMC3Q9UQE7 1217 aa3.36□□□□□ -1.87
HERPUD1-211ENST00000566550 CARD8Q9Y2G2 431 aa3.36□□□□□ -1.87
HERPUD1-211ENST00000566550 DDX52Q9Y2R4 599 aaKnown RBP eCLIP3.36□□□□□ -1.87
HERPUD1-211ENST00000566550 MAP3K2Q9Y2U5 619 aa3.36□□□□□ -1.87
HERPUD1-211ENST00000566550 TDRKHQ9Y2W6 561 aaKnown RBP3.36□□□□□ -1.87
HERPUD1-211ENST00000566550 STRAPQ9Y3F4 350 aaKnown RBP3.36□□□□□ -1.87
HERPUD1-211ENST00000566550 UTP18Q9Y5J1 556 aaKnown RBP eCLIP3.36□□□□□ -1.87
HERPUD1-211ENST00000566550 CLRN2A0PK11 232 aa3.35□□□□□ -1.87
HERPUD1-211ENST00000566550 TYW5A2RUC4 315 aaKnown RBP3.35□□□□□ -1.87
HERPUD1-211ENST00000566550 TTC34A8MYJ7 566 aa3.35□□□□□ -1.87
HERPUD1-211ENST00000566550 GPR89AB7ZAQ6 455 aa3.35□□□□□ -1.87
HERPUD1-211ENST00000566550 MCIDASD6RGH6 385 aa3.35□□□□□ -1.87
HERPUD1-211ENST00000566550 UBXN8O00124 270 aa3.35□□□□□ -1.87
HERPUD1-211ENST00000566550 IFIT3O14879 490 aaKnown RBP3.35□□□□□ -1.87
HERPUD1-211ENST00000566550 B4GALT4O60513 344 aa3.35□□□□□ -1.87
HERPUD1-211ENST00000566550 KLHL41O60662 606 aa3.35□□□□□ -1.87
HERPUD1-211ENST00000566550 PRDM1O75626 825 aa3.35□□□□□ -1.87
HERPUD1-211ENST00000566550 RPS6KA4O75676 772 aa3.35□□□□□ -1.87
HERPUD1-211ENST00000566550 DDHD2O94830 711 aa3.35□□□□□ -1.87
HERPUD1-211ENST00000566550 MT-CYBP00156 380 aaPredicted RBP3.35□□□□□ -1.87
HERPUD1-211ENST00000566550 MT-ATP6P00846 226 aa3.35□□□□□ -1.87
HERPUD1-211ENST00000566550 TGFAP01135 160 aa3.35□□□□□ -1.87
HERPUD1-211ENST00000566550 MBPP02686 304 aaPredicted RBP3.35□□□□□ -1.87
HERPUD1-211ENST00000566550 CYC1P08574 325 aa3.35□□□□□ -1.87
HERPUD1-211ENST00000566550 IL6RP08887 468 aaPredicted RBP3.35□□□□□ -1.87
HERPUD1-211ENST00000566550 GPR89BP0CG08 455 aa3.35□□□□□ -1.87
HERPUD1-211ENST00000566550 ACTN1P12814 892 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms