RNA–Protein interactions for RNA: ENST00000564709.5

SPSB3-206, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 2

Gene SPSB3, Length 2,316 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-206ENST00000564709 C6orf10Q5SRN2 563 aa22.29■■□□□ 1.16
SPSB3-206ENST00000564709 PAQR3Q6TCH7 311 aa22.29■■□□□ 1.16
SPSB3-206ENST00000564709 RNF180Q86T96 592 aa22.29■■□□□ 1.16
SPSB3-206ENST00000564709 RETREG3Q86VR2 466 aa22.29■■□□□ 1.16
SPSB3-206ENST00000564709 TMEM126BQ8IUX1 230 aa22.29■■□□□ 1.16
SPSB3-206ENST00000564709 RMDN1Q96DB5 314 aa22.29■■□□□ 1.16
SPSB3-206ENST00000564709 TRIB3Q96RU7 358 aa22.29■■□□□ 1.16
SPSB3-206ENST00000564709 RNF186Q9NXI6 227 aa22.29■■□□□ 1.16
SPSB3-206ENST00000564709 AP4S1Q9Y587 144 aa22.29■■□□□ 1.16
SPSB3-206ENST00000564709 OR6B1O95007 311 aa22.29■■□□□ 1.16
SPSB3-206ENST00000564709 PENKP01210 267 aaPredicted RBP22.29■■□□□ 1.16
SPSB3-206ENST00000564709 C8BP07358 591 aa22.29■■□□□ 1.16
SPSB3-206ENST00000564709 CDKN1CP49918 316 aaPredicted RBP22.29■■□□□ 1.16
SPSB3-206ENST00000564709 SCNN1BP51168 640 aa22.29■■□□□ 1.16
SPSB3-206ENST00000564709 SUOXP51687 545 aa22.29■■□□□ 1.16
SPSB3-206ENST00000564709 GNA12Q03113 381 aa22.29■■□□□ 1.16
SPSB3-206ENST00000564709 RING1Q06587 406 aa22.29■■□□□ 1.16
SPSB3-206ENST00000564709 RAB44Q7Z6P3 723 aaPredicted RBP22.29■■□□□ 1.16
SPSB3-206ENST00000564709 TMEM173Q86WV6 379 aaPredicted RBP22.29■■□□□ 1.16
SPSB3-206ENST00000564709 OR4K2Q8NGD2 314 aa22.29■■□□□ 1.16
SPSB3-206ENST00000564709 XRN2Q9H0D6 950 aaKnown RBP eCLIP22.29■■□□□ 1.168e-12■■■■■ 36
SPSB3-206ENST00000564709 A0A0J9YYE9 177 aa22.28■■□□□ 1.16
SPSB3-206ENST00000564709 AZIN1O14977 448 aa22.28■■□□□ 1.16
SPSB3-206ENST00000564709 ATF6P18850 670 aa22.28■■□□□ 1.16
SPSB3-206ENST00000564709 SLC11A1P49279 550 aa22.28■■□□□ 1.16
SPSB3-206ENST00000564709 PRSS55Q6UWB4 352 aaPredicted RBP22.28■■□□□ 1.16
SPSB3-206ENST00000564709 TAS1R1Q7RTX1 841 aa22.28■■□□□ 1.16
SPSB3-206ENST00000564709 EME1Q96AY2 570 aa22.28■■□□□ 1.16
SPSB3-206ENST00000564709 SLCO4A1Q96BD0 722 aa22.28■■□□□ 1.16
SPSB3-206ENST00000564709 ZBED2Q9BTP6 218 aa22.28■■□□□ 1.16
SPSB3-206ENST00000564709 CINPQ9BW66 212 aaPredicted RBP22.28■■□□□ 1.16
SPSB3-206ENST00000564709 TUBB1Q9H4B7 451 aa22.28■■□□□ 1.16
SPSB3-206ENST00000564709 MRGBPQ9NV56 204 aa22.28■■□□□ 1.16
SPSB3-206ENST00000564709 CD300AQ9UGN4 299 aa22.28■■□□□ 1.16
SPSB3-206ENST00000564709 NCF1BA6NI72 391 aaPredicted RBP22.28■■□□□ 1.16
SPSB3-206ENST00000564709 NCF1CA8MVU1 366 aaPredicted RBP22.28■■□□□ 1.16
SPSB3-206ENST00000564709 CLASP2O75122 1294 aaKnown RBP22.28■■□□□ 1.16
SPSB3-206ENST00000564709 LINC00032P0C843 101 aa22.28■■□□□ 1.16
SPSB3-206ENST00000564709 NCF1P14598 390 aaPredicted RBP22.28■■□□□ 1.16
SPSB3-206ENST00000564709 OGNP20774 298 aaKnown RBP22.28■■□□□ 1.16
SPSB3-206ENST00000564709 EEF1DP29692 281 aaKnown RBP22.28■■□□□ 1.16
SPSB3-206ENST00000564709 ECT2LQ008S8 904 aa22.28■■□□□ 1.16
SPSB3-206ENST00000564709 GPR17Q13304 367 aa22.28■■□□□ 1.16
SPSB3-206ENST00000564709 TYSND1Q2T9J0 566 aa22.28■■□□□ 1.16
SPSB3-206ENST00000564709 GLT6D1Q7Z4J2 308 aa22.28■■□□□ 1.16
SPSB3-206ENST00000564709 FAM110BQ8TC76 370 aa22.28■■□□□ 1.16
SPSB3-206ENST00000564709 GLT1D1Q96MS3 346 aa22.28■■□□□ 1.16
SPSB3-206ENST00000564709 CYP2S1Q96SQ9 504 aa22.28■■□□□ 1.16
SPSB3-206ENST00000564709 MGME1Q9BQP7 344 aa22.28■■□□□ 1.16
SPSB3-206ENST00000564709 SEMA4BQ9NPR2 832 aaPredicted RBP22.28■■□□□ 1.16
SPSB3-206ENST00000564709 TMEM181Q9P2C4 612 aa22.28■■□□□ 1.16
SPSB3-206ENST00000564709 GALPQ9UBC7 116 aa22.28■■□□□ 1.16
SPSB3-206ENST00000564709 RNF112Q9ULX5 631 aa22.28■■□□□ 1.16
SPSB3-206ENST00000564709 MED16Q9Y2X0 877 aa22.28■■□□□ 1.16
SPSB3-206ENST00000564709 SLC38A8A6NNN8 435 aa22.27■■□□□ 1.16
SPSB3-206ENST00000564709 EPOP01588 193 aa22.27■■□□□ 1.16
SPSB3-206ENST00000564709 SGSHP51688 502 aa22.27■■□□□ 1.16
SPSB3-206ENST00000564709 ZNF140P52738 457 aaPredicted RBP22.27■■□□□ 1.16
SPSB3-206ENST00000564709 MYBPC1Q00872 1141 aa22.27■■□□□ 1.16
SPSB3-206ENST00000564709 PTPRRQ15256 657 aa22.27■■□□□ 1.16
SPSB3-206ENST00000564709 TSNQ15631 228 aaKnown RBP22.27■■□□□ 1.16
SPSB3-206ENST00000564709 SETMARQ53H47 684 aaPredicted RBP22.27■■□□□ 1.16
SPSB3-206ENST00000564709 CWF19L1Q69YN2 538 aaKnown RBP22.27■■□□□ 1.16
SPSB3-206ENST00000564709 FUT10Q6P4F1 479 aa22.27■■□□□ 1.16
SPSB3-206ENST00000564709 MDGA1Q8NFP4 955 aa22.27■■□□□ 1.16
SPSB3-206ENST00000564709 NACA2Q9H009 215 aa22.27■■□□□ 1.16
SPSB3-206ENST00000564709 TMEM161AQ9NX61 479 aa22.27■■□□□ 1.16
SPSB3-206ENST00000564709 A0A0U1RQS6 177 aa22.26■■□□□ 1.15
SPSB3-206ENST00000564709 AP1G1O43747 822 aa22.26■■□□□ 1.15
SPSB3-206ENST00000564709 GJB5O95377 273 aa22.26■■□□□ 1.15
SPSB3-206ENST00000564709 RHDQ02161 417 aa22.26■■□□□ 1.15
SPSB3-206ENST00000564709 VPS26BQ4G0F5 336 aa22.26■■□□□ 1.15
SPSB3-206ENST00000564709 KANK2Q63ZY3 851 aa22.26■■□□□ 1.15
SPSB3-206ENST00000564709 C8orf82Q6P1X6 216 aaPredicted RBP22.26■■□□□ 1.15
SPSB3-206ENST00000564709 IYDQ6PHW0 289 aa22.26■■□□□ 1.15
SPSB3-206ENST00000564709 HERC6Q8IVU3 1022 aa22.26■■□□□ 1.15
SPSB3-206ENST00000564709 PIP4K2CQ8TBX8 421 aa22.26■■□□□ 1.15
SPSB3-206ENST00000564709 PEX13Q92968 403 aa22.26■■□□□ 1.15
SPSB3-206ENST00000564709 SPATA17Q96L03 361 aa22.26■■□□□ 1.15
SPSB3-206ENST00000564709 MRPL40Q9NQ50 206 aaKnown RBP22.26■■□□□ 1.15
SPSB3-206ENST00000564709 UBA2Q9UBT2 640 aaPredicted RBP22.26■■□□□ 1.15
SPSB3-206ENST00000564709 SNX13Q9Y5W8 968 aa22.26■■□□□ 1.15
SPSB3-206ENST00000564709 ZNF839A8K0R7 811 aa22.26■■□□□ 1.15
SPSB3-206ENST00000564709 CDC7O00311 574 aa22.26■■□□□ 1.15
SPSB3-206ENST00000564709 ACSL4O60488 711 aa22.26■■□□□ 1.15
SPSB3-206ENST00000564709 ATP4BP51164 291 aa22.26■■□□□ 1.15
SPSB3-206ENST00000564709 ROR2Q01974 943 aaKnown RBP22.26■■□□□ 1.15
SPSB3-206ENST00000564709 LAMB3Q13751 1172 aa22.26■■□□□ 1.15
SPSB3-206ENST00000564709 MTX3Q5HYI7 312 aa22.26■■□□□ 1.15
SPSB3-206ENST00000564709 AMIGO2Q86SJ2 522 aa22.26■■□□□ 1.15
SPSB3-206ENST00000564709 DENND1CQ8IV53 801 aa22.26■■□□□ 1.15
SPSB3-206ENST00000564709 TUBGCP3Q96CW5 907 aa22.26■■□□□ 1.15
SPSB3-206ENST00000564709 PRICKLE1Q96MT3 831 aaPredicted RBP22.26■■□□□ 1.15
SPSB3-206ENST00000564709 TFB2MQ9H5Q4 396 aaKnown RBP22.26■■□□□ 1.15
SPSB3-206ENST00000564709 NLE1Q9NVX2 485 aaPredicted RBP22.26■■□□□ 1.15
SPSB3-206ENST00000564709 SEPT3Q9UH03 358 aa22.26■■□□□ 1.15
SPSB3-206ENST00000564709 CASP8AP2Q9UKL3 1982 aa22.26■■□□□ 1.15
SPSB3-206ENST00000564709 NPEPPSL1A6NEC2 478 aa22.25■■□□□ 1.15
SPSB3-206ENST00000564709 ZDHHC11BP0C7U3 371 aa22.25■■□□□ 1.15
SPSB3-206ENST00000564709 PABPC4LP0CB38 370 aaKnown RBP22.25■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms