RNA–Protein interactions for RNA: ENST00000564581.1

SUB1P3-201, Transcript of SUB1 homolog, transcriptional regulator pseudogene 3, humanhuman

BASIC

Gene SUB1P3, Length 315 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1P3-201ENST00000564581 PKN2Q16513 984 aaKnown RBP2.48□□□□□ -2.01
SUB1P3-201ENST00000564581 ESCO2Q56NI9 601 aa2.48□□□□□ -2.01
SUB1P3-201ENST00000564581 HIST2H2BCQ6DN03 193 aa2.48□□□□□ -2.01
SUB1P3-201ENST00000564581 WDR73Q6P4I2 378 aa2.48□□□□□ -2.01
SUB1P3-201ENST00000564581 CCDC174Q6PII3 467 aa2.48□□□□□ -2.01
SUB1P3-201ENST00000564581 B3GNT6Q6ZMB0 384 aa2.48□□□□□ -2.01
SUB1P3-201ENST00000564581 PRSS45Q7RTY3 260 aa2.48□□□□□ -2.01
SUB1P3-201ENST00000564581 DSG4Q86SJ6 1040 aa2.48□□□□□ -2.01
SUB1P3-201ENST00000564581 SFR1Q86XK3 245 aa2.48□□□□□ -2.01
SUB1P3-201ENST00000564581 SFTPA2Q8IWL1 248 aa2.48□□□□□ -2.01
SUB1P3-201ENST00000564581 ODF3L1Q8IXM7 274 aa2.48□□□□□ -2.01
SUB1P3-201ENST00000564581 PARP16Q8N5Y8 322 aa2.48□□□□□ -2.01
SUB1P3-201ENST00000564581 AFG1LQ8WV93 481 aa2.48□□□□□ -2.01
SUB1P3-201ENST00000564581 TMEM19Q96HH6 336 aa2.48□□□□□ -2.01
SUB1P3-201ENST00000564581 FEM1CQ96JP0 617 aa2.48□□□□□ -2.01
SUB1P3-201ENST00000564581 TTC14Q96N46 770 aa2.48□□□□□ -2.01
SUB1P3-201ENST00000564581 CLSTN3Q9BQT9 956 aa2.48□□□□□ -2.01
SUB1P3-201ENST00000564581 LMAN2LQ9H0V9 348 aa2.48□□□□□ -2.01
SUB1P3-201ENST00000564581 CSTL1Q9H114 145 aa2.48□□□□□ -2.01
SUB1P3-201ENST00000564581 ENTPD7Q9NQZ7 604 aa2.48□□□□□ -2.01
SUB1P3-201ENST00000564581 ZNF224Q9NZL3 707 aa2.48□□□□□ -2.01
SUB1P3-201ENST00000564581 CTNNAL1Q9UBT7 734 aa2.48□□□□□ -2.01
SUB1P3-201ENST00000564581 CDC14AQ9UNH5 594 aa2.48□□□□□ -2.01
SUB1P3-201ENST00000564581 DAAM1Q9Y4D1 1078 aa2.48□□□□□ -2.01
SUB1P3-201ENST00000564581 MKI67P46013 3256 aaKnown RBP2.48□□□□□ -2.01
SUB1P3-201ENST00000564581 THSD7BQ9C0I4 1608 aa2.48□□□□□ -2.01
SUB1P3-201ENST00000564581 LAMB4A4D0S4 1761 aa2.48□□□□□ -2.01
SUB1P3-201ENST00000564581 KIAA0232Q92628 1395 aa2.48□□□□□ -2.01
SUB1P3-201ENST00000564581 UBR3Q6ZT12 1888 aa2.48□□□□□ -2.01
SUB1P3-201ENST00000564581 CGNL1Q0VF96 1302 aa2.47□□□□□ -2.01
SUB1P3-201ENST00000564581 NRXN1Q9ULB1 1477 aa2.47□□□□□ -2.01
SUB1P3-201ENST00000564581 LRRC37A3O60309 1634 aa2.47□□□□□ -2.01
SUB1P3-201ENST00000564581 CLTCL1P53675 1640 aa2.47□□□□□ -2.01
SUB1P3-201ENST00000564581 RANBP2P49792 3224 aaKnown RBP2.47□□□□□ -2.01
SUB1P3-201ENST00000564581 HSPB2A8KAH6 182 aa2.47□□□□□ -2.01
SUB1P3-201ENST00000564581 KLRF2D3W0D1 207 aa2.47□□□□□ -2.01
SUB1P3-201ENST00000564581 CEP104O60308 925 aa2.47□□□□□ -2.01
SUB1P3-201ENST00000564581 GAGE7O76087 117 aa2.47□□□□□ -2.01
SUB1P3-201ENST00000564581 GAGE12FP0CL80 117 aa2.47□□□□□ -2.01
SUB1P3-201ENST00000564581 GAGE12GP0CL81 117 aa2.47□□□□□ -2.01
SUB1P3-201ENST00000564581 GAGE12IP0CL82 117 aa2.47□□□□□ -2.01
SUB1P3-201ENST00000564581 CETPP11597 493 aa2.47□□□□□ -2.01
SUB1P3-201ENST00000564581 ITGAXP20702 1163 aa2.47□□□□□ -2.01
SUB1P3-201ENST00000564581 RYKP34925 604 aa2.47□□□□□ -2.01
SUB1P3-201ENST00000564581 AARSP49588 968 aaKnown RBP eCLIP2.47□□□□□ -2.01
SUB1P3-201ENST00000564581 TAF6P49848 677 aa2.47□□□□□ -2.01
SUB1P3-201ENST00000564581 ATP12AP54707 1039 aa2.47□□□□□ -2.01
SUB1P3-201ENST00000564581 GOLGA8FQ08AF8 430 aa2.47□□□□□ -2.01
SUB1P3-201ENST00000564581 FOXO1Q12778 655 aa2.47□□□□□ -2.01
SUB1P3-201ENST00000564581 GAGE1Q13065 139 aa2.47□□□□□ -2.01
SUB1P3-201ENST00000564581 GAGE4Q13068 117 aa2.47□□□□□ -2.01
SUB1P3-201ENST00000564581 TNFAIP1Q13829 316 aa2.47□□□□□ -2.01
SUB1P3-201ENST00000564581 RUNX2Q13950 521 aa2.47□□□□□ -2.01
SUB1P3-201ENST00000564581 OASLQ15646 514 aaKnown RBP2.47□□□□□ -2.01
SUB1P3-201ENST00000564581 HSPB2Q16082 182 aa2.47□□□□□ -2.01
SUB1P3-201ENST00000564581 AMZ1Q400G9 498 aa2.47□□□□□ -2.01
SUB1P3-201ENST00000564581 PLA2G4FQ68DD2 849 aa2.47□□□□□ -2.01
SUB1P3-201ENST00000564581 IL20RBQ6UXL0 311 aa2.47□□□□□ -2.01
SUB1P3-201ENST00000564581 NEK10Q6ZWH5 1172 aa2.47□□□□□ -2.01
SUB1P3-201ENST00000564581 ZMIZ2Q8NF64 920 aa2.47□□□□□ -2.01
SUB1P3-201ENST00000564581 GJC3Q8NFK1 279 aa2.47□□□□□ -2.01
SUB1P3-201ENST00000564581 LNX1Q8TBB1 728 aaPredicted RBP2.47□□□□□ -2.01
SUB1P3-201ENST00000564581 TAF15Q92804 592 aaKnown RBP eCLIP2.47□□□□□ -2.01
SUB1P3-201ENST00000564581 FBXO17Q96EF6 278 aa2.47□□□□□ -2.01
SUB1P3-201ENST00000564581 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP2.47□□□□□ -2.01
SUB1P3-201ENST00000564581 TRMT61BQ9BVS5 477 aaKnown RBP2.47□□□□□ -2.01
SUB1P3-201ENST00000564581 TWSG1Q9GZX9 223 aa2.47□□□□□ -2.01
SUB1P3-201ENST00000564581 FBRSL1Q9HCM7 1045 aaKnown RBP2.47□□□□□ -2.01
SUB1P3-201ENST00000564581 CISD1Q9NZ45 108 aaKnown RBP2.47□□□□□ -2.01
SUB1P3-201ENST00000564581 IFT80Q9P2H3 777 aaPredicted RBP2.47□□□□□ -2.01
SUB1P3-201ENST00000564581 VDAC3Q9Y277 283 aa2.47□□□□□ -2.01
SUB1P3-201ENST00000564581 DNAJC16Q9Y2G8 782 aa2.47□□□□□ -2.01
SUB1P3-201ENST00000564581 DERAQ9Y315 318 aa2.47□□□□□ -2.01
SUB1P3-201ENST00000564581 SPATA31E1Q6ZUB1 1445 aa2.47□□□□□ -2.01
SUB1P3-201ENST00000564581 SNED1Q8TER0 1413 aa2.47□□□□□ -2.01
SUB1P3-201ENST00000564581 LAMA2P24043 3122 aaKnown RBP2.47□□□□□ -2.01
SUB1P3-201ENST00000564581 FER1L6Q2WGJ9 1857 aa2.47□□□□□ -2.01
SUB1P3-201ENST00000564581 GPRASP1Q5JY77 1395 aa2.47□□□□□ -2.01
SUB1P3-201ENST00000564581 USP54Q70EL1 1684 aa2.47□□□□□ -2.01
SUB1P3-201ENST00000564581 PDS5AQ29RF7 1337 aaKnown RBP2.46□□□□□ -2.02
SUB1P3-201ENST00000564581 FLNBO75369 2602 aaKnown RBP2.46□□□□□ -2.02
SUB1P3-201ENST00000564581 ACACBO00763 2458 aa2.46□□□□□ -2.02
SUB1P3-201ENST00000564581 USP6P35125 1406 aa2.46□□□□□ -2.02
SUB1P3-201ENST00000564581 CRB1P82279 1406 aa2.46□□□□□ -2.02
SUB1P3-201ENST00000564581 NAIPQ13075 1403 aa2.46□□□□□ -2.02
SUB1P3-201ENST00000564581 FAM172BPA6NC97 362 aa2.46□□□□□ -2.02
SUB1P3-201ENST00000564581 PABPN1LA6NDY0 278 aaKnown RBP2.46□□□□□ -2.02
SUB1P3-201ENST00000564581 ANTXRLA6NF34 631 aa2.46□□□□□ -2.02
SUB1P3-201ENST00000564581 CBY3A6NI87 242 aa2.46□□□□□ -2.02
SUB1P3-201ENST00000564581 ERI2A8K979 691 aaKnown RBP2.46□□□□□ -2.02
SUB1P3-201ENST00000564581 EBAG9O00559 213 aa2.46□□□□□ -2.02
SUB1P3-201ENST00000564581 FGF17O60258 216 aa2.46□□□□□ -2.02
SUB1P3-201ENST00000564581 FAM155BO75949 473 aa2.46□□□□□ -2.02
SUB1P3-201ENST00000564581 TBX6O95947 436 aaPredicted RBP2.46□□□□□ -2.02
SUB1P3-201ENST00000564581 HLA-DOBP13765 273 aa2.46□□□□□ -2.02
SUB1P3-201ENST00000564581 ADD2P35612 726 aa2.46□□□□□ -2.02
SUB1P3-201ENST00000564581 TIMP3P35625 211 aa2.46□□□□□ -2.02
SUB1P3-201ENST00000564581 HTR3AP46098 478 aa2.46□□□□□ -2.02
SUB1P3-201ENST00000564581 CLDN2P57739 230 aa2.46□□□□□ -2.02
SUB1P3-201ENST00000564581 RELQ04864 619 aaPredicted RBP2.46□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms