RNA–Protein interactions for RNA: ENST00000564068.1

COMMD4-209, Transcript of COMM domain containing 4, humanhuman

Gene COMMD4, Length 4,204 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-209ENST00000564068 RPRD1BQ9NQG5 326 aaKnown RBP12.59□□□□□ -0.39
COMMD4-209ENST00000564068 CATSPERZQ9NTU4 200 aa12.59□□□□□ -0.39
COMMD4-209ENST00000564068 MAGEL2Q9UJ55 1249 aa12.59□□□□□ -0.39
COMMD4-209ENST00000564068 GNPTGQ9UJJ9 305 aa12.59□□□□□ -0.39
COMMD4-209ENST00000564068 ARPC2O15144 300 aa12.59□□□□□ -0.39
COMMD4-209ENST00000564068 IL7RP16871 459 aa12.59□□□□□ -0.39
COMMD4-209ENST00000564068 POLR2JP52435 117 aaKnown RBP12.59□□□□□ -0.39
COMMD4-209ENST00000564068 GRIK4Q16099 956 aa12.59□□□□□ -0.39
COMMD4-209ENST00000564068 NAPRTQ6XQN6 538 aa12.59□□□□□ -0.39
COMMD4-209ENST00000564068 GPRIN3Q6ZVF9 776 aa12.59□□□□□ -0.39
COMMD4-209ENST00000564068 AHSA2Q719I0 299 aa12.59□□□□□ -0.39
COMMD4-209ENST00000564068 ROPN1LQ96C74 230 aa12.59□□□□□ -0.39
COMMD4-209ENST00000564068 SENP8Q96LD8 212 aa12.59□□□□□ -0.39
COMMD4-209ENST00000564068 GBA3Q9H227 469 aa12.59□□□□□ -0.39
COMMD4-209ENST00000564068 AMBNQ9NP70 447 aa12.59□□□□□ -0.39
COMMD4-209ENST00000564068 FAIMQ9NVQ4 179 aa12.59□□□□□ -0.39
COMMD4-209ENST00000564068 ZDHHC7Q9NXF8 308 aa12.59□□□□□ -0.39
COMMD4-209ENST00000564068 MOXD2PA6NHM9 499 aa12.58□□□□□ -0.39
COMMD4-209ENST00000564068 SLC22A2O15244 555 aa12.58□□□□□ -0.39
COMMD4-209ENST00000564068 NPHS1O60500 1241 aa12.58□□□□□ -0.39
COMMD4-209ENST00000564068 CLPXO76031 633 aa12.58□□□□□ -0.39
COMMD4-209ENST00000564068 OR1E1P30953 314 aa12.58□□□□□ -0.39
COMMD4-209ENST00000564068 LHX1P48742 406 aa12.58□□□□□ -0.39
COMMD4-209ENST00000564068 OAZ1P54368 228 aa12.58□□□□□ -0.39
COMMD4-209ENST00000564068 SNAPC2Q13487 334 aa12.58□□□□□ -0.39
COMMD4-209ENST00000564068 SLC10A6Q3KNW5 377 aa12.58□□□□□ -0.39
COMMD4-209ENST00000564068 RABL3Q5HYI8 236 aa12.58□□□□□ -0.39
COMMD4-209ENST00000564068 TRPV3Q8NET8 790 aa12.58□□□□□ -0.39
COMMD4-209ENST00000564068 DNAJB3Q8WWF6 145 aa12.58□□□□□ -0.39
COMMD4-209ENST00000564068 ZNF512Q96ME7 567 aaPredicted RBP12.58□□□□□ -0.39
COMMD4-209ENST00000564068 KATNAL1Q9BW62 490 aa12.58□□□□□ -0.39
COMMD4-209ENST00000564068 AQP12BA6NM10 295 aa12.58□□□□□ -0.4
COMMD4-209ENST00000564068 TBKBP1A7MCY6 615 aa12.58□□□□□ -0.4
COMMD4-209ENST00000564068 UBXN8O00124 270 aa12.58□□□□□ -0.4
COMMD4-209ENST00000564068 BCKDKO14874 412 aa12.58□□□□□ -0.4
COMMD4-209ENST00000564068 CYP7B1O75881 506 aa12.58□□□□□ -0.4
COMMD4-209ENST00000564068 THP07101 528 aa12.58□□□□□ -0.4
COMMD4-209ENST00000564068 SPATA31D3P0C874 917 aa12.58□□□□□ -0.4
COMMD4-209ENST00000564068 SLC1A2P43004 574 aa12.58□□□□□ -0.4
COMMD4-209ENST00000564068 ZNF423Q2M1K9 1284 aa12.58□□□□□ -0.4
COMMD4-209ENST00000564068 THOC7Q6I9Y2 204 aaKnown RBP12.58□□□□□ -0.4
COMMD4-209ENST00000564068 TYW3Q6IPR3 259 aaKnown RBP12.58□□□□□ -0.4
COMMD4-209ENST00000564068 SPATA31D4Q6ZUB0 917 aa12.58□□□□□ -0.4
COMMD4-209ENST00000564068 ZC3HC1Q86WB0 502 aaKnown RBP12.58□□□□□ -0.4
COMMD4-209ENST00000564068 PROSER1Q86XN7 944 aa12.58□□□□□ -0.4
COMMD4-209ENST00000564068 AQP12AQ8IXF9 295 aa12.58□□□□□ -0.4
COMMD4-209ENST00000564068 SHKBP1Q8TBC3 707 aa12.58□□□□□ -0.4
COMMD4-209ENST00000564068 SLC47A1Q96FL8 570 aa12.58□□□□□ -0.4
COMMD4-209ENST00000564068 DMRTB1Q96MA1 342 aa12.58□□□□□ -0.4
COMMD4-209ENST00000564068 COLEC11Q9BWP8 271 aa12.58□□□□□ -0.4
COMMD4-209ENST00000564068 AKTIPQ9H8T0 292 aa12.58□□□□□ -0.4
COMMD4-209ENST00000564068 PRDM16Q9HAZ2 1276 aa12.58□□□□□ -0.4
COMMD4-209ENST00000564068 MOCS1Q9NZB8 636 aa12.58□□□□□ -0.4
COMMD4-209ENST00000564068 UXTQ9UBK9 157 aaPredicted RBP12.58□□□□□ -0.4
COMMD4-209ENST00000564068 SFMBT1Q9UHJ3 866 aa12.58□□□□□ -0.4
COMMD4-209ENST00000564068 SLC12A8A0AV02 714 aa12.58□□□□□ -0.4
COMMD4-209ENST00000564068 BHMG1C9JSJ3 638 aaPredicted RBP12.58□□□□□ -0.4
COMMD4-209ENST00000564068 LRIG2O94898 1065 aa12.58□□□□□ -0.4
COMMD4-209ENST00000564068 PGLSO95336 258 aa12.58□□□□□ -0.4
COMMD4-209ENST00000564068 LMO2P25791 158 aa12.58□□□□□ -0.4
COMMD4-209ENST00000564068 NDUFA5Q16718 116 aa12.58□□□□□ -0.4
COMMD4-209ENST00000564068 ZNF280DQ6N043 979 aa12.58□□□□□ -0.4
COMMD4-209ENST00000564068 ATP6V0D2Q8N8Y2 350 aa12.58□□□□□ -0.4
COMMD4-209ENST00000564068 TBATAQ96M53 351 aa12.58□□□□□ -0.4
COMMD4-209ENST00000564068 WDR70Q9NW82 654 aa12.58□□□□□ -0.4
COMMD4-209ENST00000564068 SH3BP4Q9P0V3 963 aa12.58□□□□□ -0.4
COMMD4-209ENST00000564068 MAFBQ9Y5Q3 323 aaPredicted RBP12.58□□□□□ -0.4
COMMD4-209ENST00000564068 CBX4O00257 560 aa12.58□□□□□ -0.4
COMMD4-209ENST00000564068 SNAP29O95721 258 aa12.58□□□□□ -0.4
COMMD4-209ENST00000564068 KRT6AP02538 564 aa12.58□□□□□ -0.4
COMMD4-209ENST00000564068 KRT6BP04259 564 aa12.58□□□□□ -0.4
COMMD4-209ENST00000564068 TKTP29401 623 aaKnown RBP12.58□□□□□ -0.4
COMMD4-209ENST00000564068 IFNA8P32881 189 aa12.58□□□□□ -0.4
COMMD4-209ENST00000564068 KRT6CP48668 564 aa12.58□□□□□ -0.4
COMMD4-209ENST00000564068 SYT16Q17RD7 645 aa12.58□□□□□ -0.4
COMMD4-209ENST00000564068 TMEM132CQ8N3T6 1108 aa12.58□□□□□ -0.4
COMMD4-209ENST00000564068 FIBCD1Q8N539 461 aa12.58□□□□□ -0.4
COMMD4-209ENST00000564068 C17orf50Q8WW18 174 aa12.58□□□□□ -0.4
COMMD4-209ENST00000564068 TMEM74Q96NL1 305 aa12.58□□□□□ -0.4
COMMD4-209ENST00000564068 OLFM1Q99784 485 aa12.58□□□□□ -0.4
COMMD4-209ENST00000564068 SEMA3CQ99985 751 aa12.58□□□□□ -0.4
COMMD4-209ENST00000564068 DHRS4Q9BTZ2 278 aa12.58□□□□□ -0.4
COMMD4-209ENST00000564068 POLR3HQ9Y535 204 aaPredicted RBP12.58□□□□□ -0.4
COMMD4-209ENST00000564068 RRN3P2A6NIE6 340 aa12.57□□□□□ -0.4
COMMD4-209ENST00000564068 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.57□□□□□ -0.4
COMMD4-209ENST00000564068 LOC110117498-PIK3R3F6TDL0 507 aa12.57□□□□□ -0.4
COMMD4-209ENST00000564068 CNPP09543 421 aaKnown RBP12.57□□□□□ -0.4
COMMD4-209ENST00000564068 IRF1P10914 325 aa12.57□□□□□ -0.4
COMMD4-209ENST00000564068 AZGP1P25311 298 aaKnown RBP12.57□□□□□ -0.4
COMMD4-209ENST00000564068 RELAQ04206 551 aa12.57□□□□□ -0.4
COMMD4-209ENST00000564068 HNRNPDQ14103 355 aaKnown RBP12.57□□□□□ -0.4
COMMD4-209ENST00000564068 ZFP69Q49AA0 526 aa12.57□□□□□ -0.4
COMMD4-209ENST00000564068 PIGGQ5H8A4 983 aa12.57□□□□□ -0.4
COMMD4-209ENST00000564068 DGKKQ5KSL6 1271 aa12.57□□□□□ -0.4
COMMD4-209ENST00000564068 CELF3Q5SZQ8 465 aaKnown RBP12.57□□□□□ -0.4
COMMD4-209ENST00000564068 KLHL17Q6TDP4 642 aa12.57□□□□□ -0.4
COMMD4-209ENST00000564068 GLT6D1Q7Z4J2 308 aa12.57□□□□□ -0.4
COMMD4-209ENST00000564068 IFNLR1Q8IU57 520 aaPredicted RBP12.57□□□□□ -0.4
COMMD4-209ENST00000564068 OR10A6Q8NH74 314 aa12.57□□□□□ -0.4
COMMD4-209ENST00000564068 PNPT1Q8TCS8 783 aaKnown RBP12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms