RNA–Protein interactions for RNA: ENST00000560983.1

HERC1-211, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-211ENST00000560983 LACTB2Q53H82 288 aaPredicted RBP3.9□□□□□ -1.79
HERC1-211ENST00000560983 DCAF6Q58WW2 860 aa3.9□□□□□ -1.79
HERC1-211ENST00000560983 ZNF362Q5T0B9 420 aaPredicted RBP3.9□□□□□ -1.79
HERC1-211ENST00000560983 ATXN7L2Q5T6C5 722 aaPredicted RBP3.9□□□□□ -1.79
HERC1-211ENST00000560983 FAM171BQ6P995 826 aa3.9□□□□□ -1.79
HERC1-211ENST00000560983 NCEH1Q6PIU2 408 aa3.9□□□□□ -1.79
HERC1-211ENST00000560983 SYNE3Q6ZMZ3 975 aa3.9□□□□□ -1.79
HERC1-211ENST00000560983 TPGS1Q6ZTW0 290 aa3.9□□□□□ -1.79
HERC1-211ENST00000560983 DENND5BQ6ZUT9 1274 aa3.9□□□□□ -1.79
HERC1-211ENST00000560983 Q6ZVL8 140 aa3.9□□□□□ -1.79
HERC1-211ENST00000560983 METTL23Q86XA0 190 aa3.9□□□□□ -1.79
HERC1-211ENST00000560983 DDX42Q86XP3 938 aaKnown RBP eCLIP3.9□□□□□ -1.79
HERC1-211ENST00000560983 SCN4BQ8IWT1 228 aa3.9□□□□□ -1.79
HERC1-211ENST00000560983 TMEM132CQ8N3T6 1108 aa3.9□□□□□ -1.79
HERC1-211ENST00000560983 FBXO39Q8N4B4 442 aa3.9□□□□□ -1.79
HERC1-211ENST00000560983 CLRN3Q8NCR9 226 aa3.9□□□□□ -1.79
HERC1-211ENST00000560983 OR7D4Q8NG98 312 aa3.9□□□□□ -1.79
HERC1-211ENST00000560983 OR56A1Q8NGH5 318 aa3.9□□□□□ -1.79
HERC1-211ENST00000560983 SPATA3Q8NHX4 192 aa3.9□□□□□ -1.79
HERC1-211ENST00000560983 TSPEARQ8WU66 669 aa3.9□□□□□ -1.79
HERC1-211ENST00000560983 RAX2Q96IS3 184 aa3.9□□□□□ -1.79
HERC1-211ENST00000560983 PIWIL1Q96J94 861 aaKnown RBP3.9□□□□□ -1.79
HERC1-211ENST00000560983 SERAC1Q96JX3 654 aa3.9□□□□□ -1.79
HERC1-211ENST00000560983 ACBD6Q9BR61 282 aa3.9□□□□□ -1.79
HERC1-211ENST00000560983 PYM1Q9BRP8 204 aaKnown RBP3.9□□□□□ -1.79
HERC1-211ENST00000560983 BBS2Q9BXC9 721 aa3.9□□□□□ -1.79
HERC1-211ENST00000560983 C22orf23Q9BZE7 217 aa3.9□□□□□ -1.79
HERC1-211ENST00000560983 CCSER1Q9C0I3 900 aa3.9□□□□□ -1.79
HERC1-211ENST00000560983 BCO1Q9HAY6 547 aa3.9□□□□□ -1.79
HERC1-211ENST00000560983 USP29Q9HBJ7 922 aa3.9□□□□□ -1.79
HERC1-211ENST00000560983 PREBQ9HCU5 417 aa3.9□□□□□ -1.79
HERC1-211ENST00000560983 PRSS16Q9NQE7 514 aa3.9□□□□□ -1.79
HERC1-211ENST00000560983 PRDM8Q9NQV8 689 aa3.9□□□□□ -1.79
HERC1-211ENST00000560983 GJB4Q9NTQ9 266 aa3.9□□□□□ -1.79
HERC1-211ENST00000560983 ELOVL2Q9NXB9 296 aa3.9□□□□□ -1.79
HERC1-211ENST00000560983 PLK2Q9NYY3 685 aa3.9□□□□□ -1.79
HERC1-211ENST00000560983 FOXJ2Q9P0K8 574 aa3.9□□□□□ -1.79
HERC1-211ENST00000560983 SEPT10Q9P0V9 454 aa3.9□□□□□ -1.79
HERC1-211ENST00000560983 SERGEFQ9UGK8 458 aa3.9□□□□□ -1.79
HERC1-211ENST00000560983 CLEC4EQ9ULY5 219 aa3.9□□□□□ -1.79
HERC1-211ENST00000560983 ARID2Q68CP9 1835 aa3.9□□□□□ -1.79
HERC1-211ENST00000560983 FBN1P35555 2871 aaKnown RBP3.9□□□□□ -1.79
HERC1-211ENST00000560983 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP3.89□□□□□ -1.79
HERC1-211ENST00000560983 PRAMEF33A0A0G2JMD5 474 aa3.89□□□□□ -1.79
HERC1-211ENST00000560983 EME2A4GXA9 379 aaPredicted RBP3.89□□□□□ -1.79
HERC1-211ENST00000560983 NTN3O00634 580 aaPredicted RBP3.89□□□□□ -1.79
HERC1-211ENST00000560983 SCAMP1O15126 338 aa3.89□□□□□ -1.79
HERC1-211ENST00000560983 NKX2-8O15522 239 aa3.89□□□□□ -1.79
HERC1-211ENST00000560983 PRAMEF10O60809 474 aa3.89□□□□□ -1.79
HERC1-211ENST00000560983 ATP2C2O75185 946 aa3.89□□□□□ -1.79
HERC1-211ENST00000560983 TOM1L1O75674 476 aa3.89□□□□□ -1.79
HERC1-211ENST00000560983 CLTAP09496 248 aa3.89□□□□□ -1.79
HERC1-211ENST00000560983 HARSP12081 509 aaKnown RBP3.89□□□□□ -1.79
HERC1-211ENST00000560983 MAGEA11P43364 429 aa3.89□□□□□ -1.79
HERC1-211ENST00000560983 NPTX2P47972 431 aa3.89□□□□□ -1.79
HERC1-211ENST00000560983 PGFP49763 221 aa3.89□□□□□ -1.79
HERC1-211ENST00000560983 CCR5P51681 352 aa3.89□□□□□ -1.79
HERC1-211ENST00000560983 SESN3P58005 492 aa3.89□□□□□ -1.79
HERC1-211ENST00000560983 NOP14P78316 857 aaKnown RBP3.89□□□□□ -1.79
HERC1-211ENST00000560983 TSPY1Q01534 308 aa3.89□□□□□ -1.79
HERC1-211ENST00000560983 MCL1Q07820 350 aa3.89□□□□□ -1.79
HERC1-211ENST00000560983 ZNF177Q13360 481 aaPredicted RBP3.89□□□□□ -1.79
HERC1-211ENST00000560983 DHX8Q14562 1220 aaKnown RBP3.89□□□□□ -1.79
HERC1-211ENST00000560983 PPP2R5AQ15172 486 aa3.89□□□□□ -1.79
HERC1-211ENST00000560983 CDKN3Q16667 212 aa3.89□□□□□ -1.79
HERC1-211ENST00000560983 UGT8Q16880 541 aa3.89□□□□□ -1.79
HERC1-211ENST00000560983 CPEB4Q17RY0 729 aaKnown RBP eCLIP3.89□□□□□ -1.79
HERC1-211ENST00000560983 ATP13A4Q4VNC1 1196 aa3.89□□□□□ -1.79
HERC1-211ENST00000560983 SNX30Q5VWJ9 437 aa3.89□□□□□ -1.79
HERC1-211ENST00000560983 GUSBP11Q6P575 273 aa3.89□□□□□ -1.79
HERC1-211ENST00000560983 CRTC1Q6UUV9 634 aa3.89□□□□□ -1.79
HERC1-211ENST00000560983 RAB11FIP2Q7L804 512 aa3.89□□□□□ -1.79
HERC1-211ENST00000560983 EFL1Q7Z2Z2 1120 aaKnown RBP3.89□□□□□ -1.79
HERC1-211ENST00000560983 TMPRSS9Q7Z410 1059 aa3.89□□□□□ -1.79
HERC1-211ENST00000560983 KCNK18Q7Z418 384 aa3.89□□□□□ -1.79
HERC1-211ENST00000560983 IQCHQ86VS3 1027 aa3.89□□□□□ -1.79
HERC1-211ENST00000560983 CATSPER3Q86XQ3 398 aa3.89□□□□□ -1.79
HERC1-211ENST00000560983 DRC7Q8IY82 874 aa3.89□□□□□ -1.79
HERC1-211ENST00000560983 PDCL2Q8N4E4 241 aa3.89□□□□□ -1.79
HERC1-211ENST00000560983 TEX19Q8NA77 164 aa3.89□□□□□ -1.79
HERC1-211ENST00000560983 GPR156Q8NFN8 814 aa3.89□□□□□ -1.79
HERC1-211ENST00000560983 CAVIN3Q969G5 261 aa3.89□□□□□ -1.79
HERC1-211ENST00000560983 FUBP3Q96I24 572 aaKnown RBP eCLIP3.89□□□□□ -1.79
HERC1-211ENST00000560983 BOD1Q96IK1 185 aa3.89□□□□□ -1.79
HERC1-211ENST00000560983 CEP295NLQ96MC4 621 aa3.89□□□□□ -1.79
HERC1-211ENST00000560983 TSPAN18Q96SJ8 248 aa3.89□□□□□ -1.79
HERC1-211ENST00000560983 NEUROG2Q9H2A3 272 aa3.89□□□□□ -1.79
HERC1-211ENST00000560983 DDX43Q9NXZ2 648 aaKnown RBP3.89□□□□□ -1.79
HERC1-211ENST00000560983 NLGN3Q9NZ94 848 aa3.89□□□□□ -1.79
HERC1-211ENST00000560983 CHORDC1Q9UHD1 332 aaPredicted RBP3.89□□□□□ -1.79
HERC1-211ENST00000560983 TP53TG5Q9Y2B4 290 aa3.89□□□□□ -1.79
HERC1-211ENST00000560983 DAAM1Q9Y4D1 1078 aa3.89□□□□□ -1.79
HERC1-211ENST00000560983 TACC2O95359 2948 aa3.89□□□□□ -1.79
HERC1-211ENST00000560983 MN1Q10571 1320 aaPredicted RBP3.89□□□□□ -1.79
HERC1-211ENST00000560983 PTPRJQ12913 1337 aa3.89□□□□□ -1.79
HERC1-211ENST00000560983 ZFC3H1O60293 1989 aaKnown RBP3.89□□□□□ -1.79
HERC1-211ENST00000560983 CCDC168Q8NDH2 2452 aa3.88□□□□□ -1.79
HERC1-211ENST00000560983 ANK1P16157 1881 aa3.88□□□□□ -1.79
HERC1-211ENST00000560983 CPED1A4D0V7 1026 aa3.88□□□□□ -1.79
HERC1-211ENST00000560983 CCDC169A6NNP5 214 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms