RNA–Protein interactions for RNA: ENST00000560243.5

RABGGTA-216, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 704 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-216ENST00000560243 C1orf232A0A0U1RR37 186 aa11.61□□□□□ -0.55
RABGGTA-216ENST00000560243 PRSS38A1L453 326 aa11.61□□□□□ -0.55
RABGGTA-216ENST00000560243 TMEM8BA6NDV4 472 aa11.61□□□□□ -0.55
RABGGTA-216ENST00000560243 TNFRSF10CO14798 259 aa11.61□□□□□ -0.55
RABGGTA-216ENST00000560243 PYGMP11217 842 aa11.61□□□□□ -0.55
RABGGTA-216ENST00000560243 CDK4P11802 303 aa11.61□□□□□ -0.55
RABGGTA-216ENST00000560243 ZNF30P17039 623 aa11.61□□□□□ -0.55
RABGGTA-216ENST00000560243 NFKB1P19838 968 aa11.61□□□□□ -0.55
RABGGTA-216ENST00000560243 KELP23276 732 aa11.61□□□□□ -0.55
RABGGTA-216ENST00000560243 CTNNA2P26232 953 aa11.61□□□□□ -0.55
RABGGTA-216ENST00000560243 GPR1P46091 355 aa11.61□□□□□ -0.55
RABGGTA-216ENST00000560243 DPTQ07507 201 aa11.61□□□□□ -0.55
RABGGTA-216ENST00000560243 CYP4F3Q08477 520 aa11.61□□□□□ -0.55
RABGGTA-216ENST00000560243 NOMO1Q15155 1222 aa11.61□□□□□ -0.55
RABGGTA-216ENST00000560243 ELOCQ15369 112 aa11.61□□□□□ -0.55
RABGGTA-216ENST00000560243 NR0B2Q15466 257 aa11.61□□□□□ -0.55
RABGGTA-216ENST00000560243 DOK6Q6PKX4 331 aa11.61□□□□□ -0.55
RABGGTA-216ENST00000560243 BZW1Q7L1Q6 419 aaKnown RBP11.61□□□□□ -0.55
RABGGTA-216ENST00000560243 LYSMD3Q7Z3D4 306 aa11.61□□□□□ -0.55
RABGGTA-216ENST00000560243 ZNF567Q8N184 647 aa11.61□□□□□ -0.55
RABGGTA-216ENST00000560243 DCBLD1Q8N8Z6 715 aa11.61□□□□□ -0.55
RABGGTA-216ENST00000560243 ATL2Q8NHH9 583 aa11.61□□□□□ -0.55
RABGGTA-216ENST00000560243 LYSMD1Q96S90 227 aa11.61□□□□□ -0.55
RABGGTA-216ENST00000560243 MLPHQ9BV36 600 aaPredicted RBP11.61□□□□□ -0.55
RABGGTA-216ENST00000560243 OSBPL8Q9BZF1 889 aa11.61□□□□□ -0.55
RABGGTA-216ENST00000560243 PACSIN2Q9UNF0 486 aaPredicted RBP11.61□□□□□ -0.55
RABGGTA-216ENST00000560243 GPR34Q9UPC5 381 aa11.61□□□□□ -0.55
RABGGTA-216ENST00000560243 DOLKQ9UPQ8 538 aa11.61□□□□□ -0.55
RABGGTA-216ENST00000560243 TMEM98Q9Y2Y6 226 aa11.61□□□□□ -0.55
RABGGTA-216ENST00000560243 ST14Q9Y5Y6 855 aa11.61□□□□□ -0.55
RABGGTA-216ENST00000560243 URB1O60287 2271 aaKnown RBP11.61□□□□□ -0.55
RABGGTA-216ENST00000560243 KIF26BQ2KJY2 2108 aa11.6□□□□□ -0.55
RABGGTA-216ENST00000560243 NBEAQ8NFP9 2946 aa11.6□□□□□ -0.55
RABGGTA-216ENST00000560243 CCDC66A2RUB6 948 aa11.6□□□□□ -0.55
RABGGTA-216ENST00000560243 EME2A4GXA9 379 aaPredicted RBP11.6□□□□□ -0.55
RABGGTA-216ENST00000560243 SRRM3A6NNA2 597 aaPredicted RBP11.6□□□□□ -0.55
RABGGTA-216ENST00000560243 APOC4-APOC2K7ER74 178 aa11.6□□□□□ -0.55
RABGGTA-216ENST00000560243 INPP4BO15327 924 aa11.6□□□□□ -0.55
RABGGTA-216ENST00000560243 FTCDO95954 541 aa11.6□□□□□ -0.55
RABGGTA-216ENST00000560243 MT-CO3P00414 261 aa11.6□□□□□ -0.55
RABGGTA-216ENST00000560243 APOC2P02655 101 aa11.6□□□□□ -0.55
RABGGTA-216ENST00000560243 SLC4A1P02730 911 aa11.6□□□□□ -0.55
RABGGTA-216ENST00000560243 TEAD1P28347 426 aa11.6□□□□□ -0.55
RABGGTA-216ENST00000560243 SPINT3P49223 89 aa11.6□□□□□ -0.55
RABGGTA-216ENST00000560243 DUSP3P51452 185 aaPredicted RBP11.6□□□□□ -0.55
RABGGTA-216ENST00000560243 COPS2P61201 443 aa11.6□□□□□ -0.55
RABGGTA-216ENST00000560243 E2F1Q01094 437 aa11.6□□□□□ -0.55
RABGGTA-216ENST00000560243 OTUD4Q01804 1114 aaKnown RBP11.6□□□□□ -0.55
RABGGTA-216ENST00000560243 CDK18Q07002 472 aa11.6□□□□□ -0.55
RABGGTA-216ENST00000560243 KIF5AQ12840 1032 aa11.6□□□□□ -0.55
RABGGTA-216ENST00000560243 CDCP2Q5VXM1 449 aa11.6□□□□□ -0.55
RABGGTA-216ENST00000560243 KDELC1Q6UW63 502 aa11.6□□□□□ -0.55
RABGGTA-216ENST00000560243 ADAMTSL4Q6UY14 1074 aa11.6□□□□□ -0.55
RABGGTA-216ENST00000560243 ZNF765Q7L2R6 523 aa11.6□□□□□ -0.55
RABGGTA-216ENST00000560243 TAF8Q7Z7C8 310 aa11.6□□□□□ -0.55
RABGGTA-216ENST00000560243 NRROSQ86YC3 692 aa11.6□□□□□ -0.55
RABGGTA-216ENST00000560243 PDCD7Q8N8D1 485 aaKnown RBP11.6□□□□□ -0.55
RABGGTA-216ENST00000560243 ACTL9Q8TC94 416 aa11.6□□□□□ -0.55
RABGGTA-216ENST00000560243 MAPK15Q8TD08 544 aa11.6□□□□□ -0.55
RABGGTA-216ENST00000560243 OXNAD1Q96HP4 312 aaPredicted RBP11.6□□□□□ -0.55
RABGGTA-216ENST00000560243 CALR3Q96L12 384 aaKnown RBP11.6□□□□□ -0.55
RABGGTA-216ENST00000560243 ADGRE3Q9BY15 652 aa11.6□□□□□ -0.55
RABGGTA-216ENST00000560243 CCDC86Q9H6F5 360 aaKnown RBP11.6□□□□□ -0.55
RABGGTA-216ENST00000560243 CARS2Q9HA77 564 aaKnown RBP11.6□□□□□ -0.55
RABGGTA-216ENST00000560243 USP29Q9HBJ7 922 aa11.6□□□□□ -0.55
RABGGTA-216ENST00000560243 KCTD5Q9NXV2 234 aa11.6□□□□□ -0.55
RABGGTA-216ENST00000560243 KLHL8Q9P2G9 620 aaPredicted RBP11.6□□□□□ -0.55
RABGGTA-216ENST00000560243 RABGEF1Q9UJ41 708 aa11.6□□□□□ -0.55
RABGGTA-216ENST00000560243 CNOT6Q9ULM6 557 aaKnown RBP11.6□□□□□ -0.55
RABGGTA-216ENST00000560243 PADI4Q9UM07 663 aa11.6□□□□□ -0.55
RABGGTA-216ENST00000560243 SUFUQ9UMX1 484 aa11.6□□□□□ -0.55
RABGGTA-216ENST00000560243 SHOC2Q9UQ13 582 aa11.6□□□□□ -0.55
RABGGTA-216ENST00000560243 CLCA2Q9UQC9 943 aa11.6□□□□□ -0.55
RABGGTA-216ENST00000560243 SLC17A4Q9Y2C5 497 aa11.6□□□□□ -0.55
RABGGTA-216ENST00000560243 PLEKHM1Q9Y4G2 1056 aa11.6□□□□□ -0.55
RABGGTA-216ENST00000560243 PCDHB1Q9Y5F3 818 aa11.6□□□□□ -0.55
RABGGTA-216ENST00000560243 SPO11Q9Y5K1 396 aa11.6□□□□□ -0.55
RABGGTA-216ENST00000560243 PCYT1BQ9Y5K3 369 aaPredicted RBP11.6□□□□□ -0.55
RABGGTA-216ENST00000560243 CAPN6Q9Y6Q1 641 aa11.6□□□□□ -0.55
RABGGTA-216ENST00000560243 SCN8AQ9UQD0 1980 aa11.59□□□□□ -0.55
RABGGTA-216ENST00000560243 UNC13CQ8NB66 2214 aa11.59□□□□□ -0.55
RABGGTA-216ENST00000560243 FADS2P1A8MWK0 482 aa11.59□□□□□ -0.55
RABGGTA-216ENST00000560243 H7C0C1 242 aa11.59□□□□□ -0.55
RABGGTA-216ENST00000560243 PDE2AO00408 941 aaPredicted RBP11.59□□□□□ -0.55
RABGGTA-216ENST00000560243 AURKAO14965 403 aa11.59□□□□□ -0.55
RABGGTA-216ENST00000560243 DDX3YO15523 660 aaKnown RBP11.59□□□□□ -0.55
RABGGTA-216ENST00000560243 NDST3O95803 873 aa11.59□□□□□ -0.55
RABGGTA-216ENST00000560243 GP1BAP07359 652 aa11.59□□□□□ -0.55
RABGGTA-216ENST00000560243 AK4P27144 223 aaPredicted RBP11.59□□□□□ -0.55
RABGGTA-216ENST00000560243 RBL1P28749 1068 aa11.59□□□□□ -0.55
RABGGTA-216ENST00000560243 PTPN7P35236 360 aa11.59□□□□□ -0.55
RABGGTA-216ENST00000560243 CHRNA4P43681 627 aa11.59□□□□□ -0.55
RABGGTA-216ENST00000560243 GNPDA1P46926 289 aa11.59□□□□□ -0.55
RABGGTA-216ENST00000560243 ATP5OP48047 213 aa11.59□□□□□ -0.55
RABGGTA-216ENST00000560243 WNT3AP56704 352 aa11.59□□□□□ -0.55
RABGGTA-216ENST00000560243 RWDD2BP57060 319 aa11.59□□□□□ -0.55
RABGGTA-216ENST00000560243 CCDC181Q5TID7 509 aa11.59□□□□□ -0.55
RABGGTA-216ENST00000560243 LVRNQ6Q4G3 990 aa11.59□□□□□ -0.55
RABGGTA-216ENST00000560243 MARK2Q7KZI7 788 aaKnown RBP11.59□□□□□ -0.55
RABGGTA-216ENST00000560243 PID1Q7Z2X4 250 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms