RNA–Protein interactions for RNA: ENST00000559397.5

TPM1-219, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-219ENST00000559397 TPMTP51580 245 aa16.53■□□□□ 0.24
TPM1-219ENST00000559397 SUOXP51687 545 aa16.53■□□□□ 0.24
TPM1-219ENST00000559397 TAS2R38P59533 333 aa16.53■□□□□ 0.24
TPM1-219ENST00000559397 PTPRRQ15256 657 aa16.53■□□□□ 0.24
TPM1-219ENST00000559397 TTC31Q49AM3 519 aaPredicted RBP16.53■□□□□ 0.24
TPM1-219ENST00000559397 LRRC73Q5JTD7 316 aa16.53■□□□□ 0.24
TPM1-219ENST00000559397 PDPK2PQ6A1A2 396 aa16.53■□□□□ 0.24
TPM1-219ENST00000559397 FBXL19Q6PCT2 694 aa16.53■□□□□ 0.24
TPM1-219ENST00000559397 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.53■□□□□ 0.24
TPM1-219ENST00000559397 KCNMB4Q86W47 210 aa16.53■□□□□ 0.24
TPM1-219ENST00000559397 BANPQ8N9N5 519 aa16.53■□□□□ 0.24
TPM1-219ENST00000559397 SCRN2Q96FV2 425 aa16.53■□□□□ 0.24
TPM1-219ENST00000559397 CPNE1Q99829 537 aa16.53■□□□□ 0.24
TPM1-219ENST00000559397 OMDQ99983 421 aa16.53■□□□□ 0.24
TPM1-219ENST00000559397 PCDH12Q9NPG4 1184 aa16.53■□□□□ 0.24
TPM1-219ENST00000559397 C20orf96Q9NUD7 363 aaPredicted RBP16.53■□□□□ 0.24
TPM1-219ENST00000559397 IL1RAPL1Q9NZN1 696 aa16.53■□□□□ 0.24
TPM1-219ENST00000559397 ZFATQ9P243 1243 aa16.53■□□□□ 0.24
TPM1-219ENST00000559397 PSAT1Q9Y617 370 aa16.53■□□□□ 0.24
TPM1-219ENST00000559397 KMT2EQ8IZD2 1858 aa16.53■□□□□ 0.24
TPM1-219ENST00000559397 MROH6A6NGR9 719 aa16.53■□□□□ 0.24
TPM1-219ENST00000559397 AREL1O15033 823 aa16.53■□□□□ 0.24
TPM1-219ENST00000559397 SLC7A4O43246 635 aa16.53■□□□□ 0.24
TPM1-219ENST00000559397 LAMTOR5O43504 91 aa16.53■□□□□ 0.24
TPM1-219ENST00000559397 GPR37L1O60883 481 aa16.53■□□□□ 0.24
TPM1-219ENST00000559397 SPAG7O75391 227 aa16.53■□□□□ 0.24
TPM1-219ENST00000559397 RFPL1O75677 317 aa16.53■□□□□ 0.24
TPM1-219ENST00000559397 RNASEH2AO75792 299 aaKnown RBP16.53■□□□□ 0.24
TPM1-219ENST00000559397 ALPIP09923 528 aa16.53■□□□□ 0.24
TPM1-219ENST00000559397 ARNTP27540 789 aa16.53■□□□□ 0.24
TPM1-219ENST00000559397 HNF1BP35680 557 aa16.53■□□□□ 0.24
TPM1-219ENST00000559397 GP5P40197 560 aa16.53■□□□□ 0.24
TPM1-219ENST00000559397 PXNP49023 591 aaPredicted RBP16.53■□□□□ 0.24
TPM1-219ENST00000559397 EPHB1P54762 984 aa16.53■□□□□ 0.24
TPM1-219ENST00000559397 DMWDQ09019 674 aa16.53■□□□□ 0.24
TPM1-219ENST00000559397 KIAA0930Q6ICG6 404 aaPredicted RBP16.53■□□□□ 0.24
TPM1-219ENST00000559397 ESRP1Q6NXG1 681 aaKnown RBP16.53■□□□□ 0.24
TPM1-219ENST00000559397 TSSK4Q6SA08 328 aa16.53■□□□□ 0.24
TPM1-219ENST00000559397 KBTBD6Q86V97 674 aa16.53■□□□□ 0.24
TPM1-219ENST00000559397 CNTN4Q8IWV2 1026 aa16.53■□□□□ 0.24
TPM1-219ENST00000559397 PAF1Q8N7H5 531 aa16.53■□□□□ 0.24
TPM1-219ENST00000559397 RAB7BQ96AH8 199 aa16.53■□□□□ 0.24
TPM1-219ENST00000559397 SGSM3Q96HU1 749 aa16.53■□□□□ 0.24
TPM1-219ENST00000559397 LYSMD1Q96S90 227 aa16.53■□□□□ 0.24
TPM1-219ENST00000559397 MCMBPQ9BTE3 642 aa16.53■□□□□ 0.24
TPM1-219ENST00000559397 EPN3Q9H201 632 aa16.53■□□□□ 0.24
TPM1-219ENST00000559397 NKIRAS1Q9NYS0 192 aa16.53■□□□□ 0.24
TPM1-219ENST00000559397 FZD4Q9ULV1 537 aa16.53■□□□□ 0.24
TPM1-219ENST00000559397 FADS3Q9Y5Q0 445 aa16.53■□□□□ 0.24
TPM1-219ENST00000559397 CAPN8A6NHC0 703 aa16.52■□□□□ 0.23
TPM1-219ENST00000559397 CCNFP41002 786 aa16.52■□□□□ 0.23
TPM1-219ENST00000559397 WDR4P57081 412 aaKnown RBP16.52■□□□□ 0.23
TPM1-219ENST00000559397 SFSWAPQ12872 951 aaKnown RBP16.52■□□□□ 0.23
TPM1-219ENST00000559397 HSP90AA5PQ58FG0 334 aa16.52■□□□□ 0.23
TPM1-219ENST00000559397 TSTD2Q5T7W7 516 aa16.52■□□□□ 0.23
TPM1-219ENST00000559397 GRTP1Q5TC63 336 aa16.52■□□□□ 0.23
TPM1-219ENST00000559397 NDUFAF2Q8N183 169 aa16.52■□□□□ 0.23
TPM1-219ENST00000559397 ANKRD42Q8N9B4 389 aa16.52■□□□□ 0.23
TPM1-219ENST00000559397 TPSD1Q9BZJ3 242 aa16.52■□□□□ 0.23
TPM1-219ENST00000559397 NCKAP1Q9Y2A7 1128 aa16.52■□□□□ 0.23
TPM1-219ENST00000559397 SPO11Q9Y5K1 396 aa16.52■□□□□ 0.23
TPM1-219ENST00000559397 NPIPB15A6NHN6 443 aaPredicted RBP16.51■□□□□ 0.23
TPM1-219ENST00000559397 PLRG1O43660 514 aaKnown RBP16.51■□□□□ 0.23
TPM1-219ENST00000559397 AP1G1O43747 822 aa16.51■□□□□ 0.23
TPM1-219ENST00000559397 PIRTP0C851 137 aa16.51■□□□□ 0.23
TPM1-219ENST00000559397 XPAP23025 273 aaPredicted RBP16.51■□□□□ 0.23
TPM1-219ENST00000559397 MMP12P39900 470 aa16.51■□□□□ 0.23
TPM1-219ENST00000559397 ADPRHP54922 357 aa16.51■□□□□ 0.23
TPM1-219ENST00000559397 SEMG2Q02383 582 aa16.51■□□□□ 0.23
TPM1-219ENST00000559397 CCDC15Q0P6D6 951 aa16.51■□□□□ 0.23
TPM1-219ENST00000559397 RALGDSQ12967 914 aa16.51■□□□□ 0.23
TPM1-219ENST00000559397 BMPR2Q13873 1038 aa16.51■□□□□ 0.23
TPM1-219ENST00000559397 CNGA3Q16281 694 aa16.51■□□□□ 0.23
TPM1-219ENST00000559397 CDKN3Q16667 212 aa16.51■□□□□ 0.23
TPM1-219ENST00000559397 TMEM31Q5JXX7 168 aa16.51■□□□□ 0.23
TPM1-219ENST00000559397 USP45Q70EL2 814 aa16.51■□□□□ 0.23
TPM1-219ENST00000559397 NLRP9Q7RTR0 991 aa16.51■□□□□ 0.23
TPM1-219ENST00000559397 GANCQ8TET4 914 aa16.51■□□□□ 0.23
TPM1-219ENST00000559397 AGAP2Q99490 1192 aa16.51■□□□□ 0.23
TPM1-219ENST00000559397 MAGEE1Q9HCI5 957 aa16.51■□□□□ 0.23
TPM1-219ENST00000559397 MKS1Q9NXB0 559 aa16.51■□□□□ 0.23
TPM1-219ENST00000559397 NSMCE4AQ9NXX6 385 aa16.51■□□□□ 0.23
TPM1-219ENST00000559397 B4GALT6Q9UBX8 382 aa16.51■□□□□ 0.23
TPM1-219ENST00000559397 SLC2A6Q9UGQ3 507 aa16.51■□□□□ 0.23
TPM1-219ENST00000559397 GGT7Q9UJ14 662 aa16.51■□□□□ 0.23
TPM1-219ENST00000559397 RIMKLBQ9ULI2 386 aa16.51■□□□□ 0.23
TPM1-219ENST00000559397 ITM2BQ9Y287 266 aa16.51■□□□□ 0.23
TPM1-219ENST00000559397 EML5Q05BV3 1969 aa16.51■□□□□ 0.23
TPM1-219ENST00000559397 NUMA1Q14980 2115 aa16.51■□□□□ 0.23
TPM1-219ENST00000559397 CCDC163A0A0D9SF12 145 aa16.5■□□□□ 0.23
TPM1-219ENST00000559397 GMNCA6NCL1 334 aa16.5■□□□□ 0.23
TPM1-219ENST00000559397 PRR33A8MZF0 331 aa16.5■□□□□ 0.23
TPM1-219ENST00000559397 AXIN1O15169 862 aa16.5■□□□□ 0.23
TPM1-219ENST00000559397 LDB2O43679 373 aa16.5■□□□□ 0.23
TPM1-219ENST00000559397 ZNF217O75362 1048 aa16.5■□□□□ 0.23
TPM1-219ENST00000559397 ZWINTO95229 277 aa16.5■□□□□ 0.23
TPM1-219ENST00000559397 ASMTLO95671 621 aa16.5■□□□□ 0.23
TPM1-219ENST00000559397 PYGBP11216 843 aa16.5■□□□□ 0.23
TPM1-219ENST00000559397 PAMP19021 973 aa16.5■□□□□ 0.23
TPM1-219ENST00000559397 LHCGRP22888 699 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms