RNA–Protein interactions for RNA: ENST00000558319.5

SPG11-210, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SPG11, Length 6,426 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-210ENST00000558319 ZC3H10Q96K80 434 aaKnown RBP13.94□□□□□ -0.18
SPG11-210ENST00000558319 CHCHD6Q9BRQ6 235 aa13.94□□□□□ -0.18
SPG11-210ENST00000558319 PNPLA8Q9NP80 782 aa13.94□□□□□ -0.18
SPG11-210ENST00000558319 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.94□□□□□ -0.181e-7■□□□□ 10
SPG11-210ENST00000558319 TRHDEQ9UKU6 1024 aa13.94□□□□□ -0.18
SPG11-210ENST00000558319 DDR1Q08345 913 aa13.94□□□□□ -0.18
SPG11-210ENST00000558319 KCT2Q8NC54 265 aa13.94□□□□□ -0.18
SPG11-210ENST00000558319 PIK3C3Q8NEB9 887 aa13.94□□□□□ -0.18
SPG11-210ENST00000558319 OR52E6Q96RD3 313 aa13.94□□□□□ -0.18
SPG11-210ENST00000558319 MRPL45Q9BRJ2 306 aaKnown RBP13.94□□□□□ -0.18
SPG11-210ENST00000558319 CDH19Q9H159 772 aa13.94□□□□□ -0.18
SPG11-210ENST00000558319 VPS51Q9UID3 782 aa13.94□□□□□ -0.18
SPG11-210ENST00000558319 H3BSH0 61 aa13.94□□□□□ -0.18
SPG11-210ENST00000558319 SLC28A2O43868 658 aa13.94□□□□□ -0.18
SPG11-210ENST00000558319 LRIG2O94898 1065 aa13.94□□□□□ -0.18
SPG11-210ENST00000558319 SLC5A3P53794 718 aa13.94□□□□□ -0.18
SPG11-210ENST00000558319 SLC12A3P55017 1021 aa13.94□□□□□ -0.18
SPG11-210ENST00000558319 TAS2R41P59536 307 aa13.94□□□□□ -0.18
SPG11-210ENST00000558319 TRIM28Q13263 835 aaKnown RBP13.94□□□□□ -0.18
SPG11-210ENST00000558319 EFR3AQ14156 821 aa13.94□□□□□ -0.18
SPG11-210ENST00000558319 XRRA1Q6P2D8 792 aa13.94□□□□□ -0.18
SPG11-210ENST00000558319 SMPDL3BQ92485 455 aa13.94□□□□□ -0.18
SPG11-210ENST00000558319 CERS2Q96G23 380 aa13.94□□□□□ -0.18
SPG11-210ENST00000558319 CNPPD1Q9BV87 410 aa13.94□□□□□ -0.18
SPG11-210ENST00000558319 ALG2Q9H553 416 aa13.94□□□□□ -0.18
SPG11-210ENST00000558319 WDR55Q9H6Y2 383 aaPredicted RBP13.94□□□□□ -0.18
SPG11-210ENST00000558319 SORCS3Q9UPU3 1222 aa13.94□□□□□ -0.18
SPG11-210ENST00000558319 C1orf167Q5SNV9 1468 aa13.94□□□□□ -0.18
SPG11-210ENST00000558319 ZSCAN5BA6NJL1 495 aa13.94□□□□□ -0.18
SPG11-210ENST00000558319 C9JVG2 144 aa13.94□□□□□ -0.18
SPG11-210ENST00000558319 GNB5O14775 395 aa13.94□□□□□ -0.18
SPG11-210ENST00000558319 DBIP07108 87 aaKnown RBP13.94□□□□□ -0.18
SPG11-210ENST00000558319 CHRM5P08912 532 aaPredicted RBP13.94□□□□□ -0.18
SPG11-210ENST00000558319 GLRA2P23416 452 aa13.94□□□□□ -0.18
SPG11-210ENST00000558319 BNIP2Q12982 314 aa13.94□□□□□ -0.18
SPG11-210ENST00000558319 NEPROQ6NW34 567 aa13.94□□□□□ -0.18
SPG11-210ENST00000558319 STARD8Q92502 1023 aa13.94□□□□□ -0.18
SPG11-210ENST00000558319 INTS7Q9NVH2 962 aaKnown RBP13.94□□□□□ -0.18
SPG11-210ENST00000558319 CCDC189A1A4V9 331 aa13.94□□□□□ -0.18
SPG11-210ENST00000558319 MARCKSL1P49006 195 aa13.94□□□□□ -0.18
SPG11-210ENST00000558319 ALDH3A2P51648 485 aa13.94□□□□□ -0.18
SPG11-210ENST00000558319 PHC1P78364 1004 aa13.94□□□□□ -0.18
SPG11-210ENST00000558319 PRKG2Q13237 762 aa13.94□□□□□ -0.18
SPG11-210ENST00000558319 TREML2Q5T2D2 321 aa13.94□□□□□ -0.18
SPG11-210ENST00000558319 SWT1Q5T5J6 900 aaKnown RBP13.94□□□□□ -0.18
SPG11-210ENST00000558319 TMEM110Q86TL2 294 aa13.94□□□□□ -0.18
SPG11-210ENST00000558319 PSTKQ8IV42 348 aaKnown RBP13.94□□□□□ -0.18
SPG11-210ENST00000558319 STAG3L4Q8TBR4 150 aa13.94□□□□□ -0.18
SPG11-210ENST00000558319 ZNF558Q96NG5 402 aa13.94□□□□□ -0.18
SPG11-210ENST00000558319 BRINP2Q9C0B6 783 aa13.94□□□□□ -0.18
SPG11-210ENST00000558319 ZCCHC2Q9C0B9 1178 aaKnown RBP13.94□□□□□ -0.18
SPG11-210ENST00000558319 ELOVL4Q9GZR5 314 aa13.94□□□□□ -0.18
SPG11-210ENST00000558319 GGA2Q9UJY4 613 aa13.94□□□□□ -0.18
SPG11-210ENST00000558319 TMCO1Q9UM00 188 aa13.94□□□□□ -0.18
SPG11-210ENST00000558319 PCDHB9Q9Y5E1 797 aa13.94□□□□□ -0.18
SPG11-210ENST00000558319 PCDHGA10Q9Y5H3 936 aa13.94□□□□□ -0.18
SPG11-210ENST00000558319 CASZ1Q86V15 1759 aa13.94□□□□□ -0.18
SPG11-210ENST00000558319 RCCD1A6NED2 376 aa13.93□□□□□ -0.18
SPG11-210ENST00000558319 CHADO15335 359 aa13.93□□□□□ -0.18
SPG11-210ENST00000558319 STATHP02808 62 aa13.93□□□□□ -0.18
SPG11-210ENST00000558319 LYNP07948 512 aa13.93□□□□□ -0.18
SPG11-210ENST00000558319 NAB1Q13506 487 aa13.93□□□□□ -0.18
SPG11-210ENST00000558319 LIN52Q52LA3 116 aa13.93□□□□□ -0.18
SPG11-210ENST00000558319 LCN1P1Q5VSP4 162 aa13.93□□□□□ -0.18
SPG11-210ENST00000558319 SKA1Q96BD8 255 aa13.93□□□□□ -0.18
SPG11-210ENST00000558319 LMLNQ96KR4 655 aa13.93□□□□□ -0.18
SPG11-210ENST00000558319 SNX10Q9Y5X0 201 aa13.93□□□□□ -0.18
SPG11-210ENST00000558319 TULP4Q9NRJ4 1543 aa13.93□□□□□ -0.18
SPG11-210ENST00000558319 LIASO43766 372 aa13.93□□□□□ -0.18
SPG11-210ENST00000558319 ITGA2P17301 1181 aa13.93□□□□□ -0.18
SPG11-210ENST00000558319 GABRR2P28476 465 aa13.93□□□□□ -0.18
SPG11-210ENST00000558319 RGS1Q08116 209 aa13.93□□□□□ -0.18
SPG11-210ENST00000558319 AAGABQ6PD74 315 aa13.93□□□□□ -0.18
SPG11-210ENST00000558319 NAXEQ8NCW5 288 aa13.93□□□□□ -0.18
SPG11-210ENST00000558319 SEMA3CQ99985 751 aa13.93□□□□□ -0.18
SPG11-210ENST00000558319 ABCC13Q9NSE7 274 aa13.93□□□□□ -0.18
SPG11-210ENST00000558319 ASF1AQ9Y294 204 aa13.93□□□□□ -0.18
SPG11-210ENST00000558319 APOC4-APOC2K7ER74 178 aa13.93□□□□□ -0.18
SPG11-210ENST00000558319 CCL22O00626 93 aa13.93□□□□□ -0.18
SPG11-210ENST00000558319 EPHB6O15197 1021 aa13.93□□□□□ -0.18
SPG11-210ENST00000558319 SLC25A14O95258 325 aaPredicted RBP13.93□□□□□ -0.18
SPG11-210ENST00000558319 APOC2P02655 101 aa13.93□□□□□ -0.18
SPG11-210ENST00000558319 PARP6Q2NL67 630 aa13.93□□□□□ -0.18
SPG11-210ENST00000558319 AHSA2Q719I0 299 aa13.93□□□□□ -0.18
SPG11-210ENST00000558319 HAVCR1Q96D42 359 aa13.93□□□□□ -0.18
SPG11-210ENST00000558319 CDK5RAP1Q96SZ6 601 aaKnown RBP13.93□□□□□ -0.18
SPG11-210ENST00000558319 CDADC1Q9BWV3 514 aa13.93□□□□□ -0.18
SPG11-210ENST00000558319 C12orf65Q9H3J6 166 aaKnown RBP13.93□□□□□ -0.18
SPG11-210ENST00000558319 PDP1Q9P0J1 537 aaPredicted RBP13.93□□□□□ -0.18
SPG11-210ENST00000558319 RFXANKO14593 260 aa13.93□□□□□ -0.18
SPG11-210ENST00000558319 IFNA6P05013 189 aa13.93□□□□□ -0.18
SPG11-210ENST00000558319 ADRB2P07550 413 aa13.93□□□□□ -0.18
SPG11-210ENST00000558319 MNDAP41218 407 aa13.93□□□□□ -0.18
SPG11-210ENST00000558319 RTP1P59025 263 aa13.93□□□□□ -0.18
SPG11-210ENST00000558319 DUSP4Q13115 394 aa13.93□□□□□ -0.18
SPG11-210ENST00000558319 ZNHIT3Q15649 155 aaPredicted RBP13.93□□□□□ -0.18
SPG11-210ENST00000558319 STXBP5Q5T5C0 1151 aa13.93□□□□□ -0.18
SPG11-210ENST00000558319 ADGRG6Q86SQ4 1221 aa13.93□□□□□ -0.18
SPG11-210ENST00000558319 ZNF280BQ86YH2 543 aa13.93□□□□□ -0.18
SPG11-210ENST00000558319 PTCD2Q8WV60 388 aaKnown RBP13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms