RNA–Protein interactions for RNA: ENST00000557566.1

SPTLC2-206, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 2

Gene SPTLC2, Length 510 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-206ENST00000557566 STK19P49842 368 aaPredicted RBP6.89□□□□□ -1.31
SPTLC2-206ENST00000557566 AMPD3Q01432 767 aa6.89□□□□□ -1.31
SPTLC2-206ENST00000557566 ZFP36L1Q07352 338 aaKnown RBP6.89□□□□□ -1.31
SPTLC2-206ENST00000557566 CYP24A1Q07973 514 aa6.89□□□□□ -1.31
SPTLC2-206ENST00000557566 PCDH1Q08174 1060 aa6.89□□□□□ -1.31
SPTLC2-206ENST00000557566 PDCLQ13371 301 aa6.89□□□□□ -1.31
SPTLC2-206ENST00000557566 XRCC4Q13426 336 aa6.89□□□□□ -1.31
SPTLC2-206ENST00000557566 RIPK1Q13546 671 aa6.89□□□□□ -1.31
SPTLC2-206ENST00000557566 PWP1Q13610 501 aa6.89□□□□□ -1.31
SPTLC2-206ENST00000557566 PDE1CQ14123 709 aaPredicted RBP6.89□□□□□ -1.31
SPTLC2-206ENST00000557566 PSMD6Q15008 389 aa6.89□□□□□ -1.31
SPTLC2-206ENST00000557566 ASTE1Q2TB18 679 aaPredicted RBP6.89□□□□□ -1.31
SPTLC2-206ENST00000557566 EIF2S3LQ2VIR3 472 aaKnown RBP6.89□□□□□ -1.31
SPTLC2-206ENST00000557566 DEFB109BQ30KR1 87 aa6.89□□□□□ -1.31
SPTLC2-206ENST00000557566 CEP85LQ5SZL2 805 aa6.89□□□□□ -1.31
SPTLC2-206ENST00000557566 PIP5KL1Q5T9C9 394 aa6.89□□□□□ -1.31
SPTLC2-206ENST00000557566 CNNM4Q6P4Q7 775 aa6.89□□□□□ -1.31
SPTLC2-206ENST00000557566 CCDC121Q6ZUS5 278 aa6.89□□□□□ -1.31
SPTLC2-206ENST00000557566 ASB18Q6ZVZ8 466 aa6.89□□□□□ -1.31
SPTLC2-206ENST00000557566 STXBP4Q6ZWJ1 553 aa6.89□□□□□ -1.31
SPTLC2-206ENST00000557566 CROCCP2Q86T23 111 aa6.89□□□□□ -1.31
SPTLC2-206ENST00000557566 UNC45BQ8IWX7 931 aa6.89□□□□□ -1.31
SPTLC2-206ENST00000557566 CCDC13Q8IYE1 715 aa6.89□□□□□ -1.31
SPTLC2-206ENST00000557566 SMYD4Q8IYR2 804 aaPredicted RBP6.89□□□□□ -1.31
SPTLC2-206ENST00000557566 CACNA2D3Q8IZS8 1091 aa6.89□□□□□ -1.31
SPTLC2-206ENST00000557566 RBFAQ8N0V3 343 aa6.89□□□□□ -1.31
SPTLC2-206ENST00000557566 CCHCR1Q8TD31 782 aa6.89□□□□□ -1.31
SPTLC2-206ENST00000557566 RNF139Q8WU17 664 aa6.89□□□□□ -1.31
SPTLC2-206ENST00000557566 KIAA1143Q96AT1 154 aaPredicted RBP6.89□□□□□ -1.31
SPTLC2-206ENST00000557566 SGSM3Q96HU1 749 aa6.89□□□□□ -1.31
SPTLC2-206ENST00000557566 CAPZA3Q96KX2 299 aa6.89□□□□□ -1.31
SPTLC2-206ENST00000557566 TBATAQ96M53 351 aa6.89□□□□□ -1.31
SPTLC2-206ENST00000557566 DDX50Q9BQ39 737 aaKnown RBP6.89□□□□□ -1.31
SPTLC2-206ENST00000557566 EFHD1Q9BUP0 239 aa6.89□□□□□ -1.31
SPTLC2-206ENST00000557566 DUSP16Q9BY84 665 aa6.89□□□□□ -1.31
SPTLC2-206ENST00000557566 DNAI2Q9GZS0 605 aa6.89□□□□□ -1.31
SPTLC2-206ENST00000557566 CNOT10Q9H9A5 744 aaKnown RBP6.89□□□□□ -1.31
SPTLC2-206ENST00000557566 TMBIM4Q9HC24 238 aa6.89□□□□□ -1.31
SPTLC2-206ENST00000557566 TMEM59LQ9UK28 342 aa6.89□□□□□ -1.31
SPTLC2-206ENST00000557566 SUFUQ9UMX1 484 aa6.89□□□□□ -1.31
SPTLC2-206ENST00000557566 PVALEFA0A1B0GWK0 134 aa6.88□□□□□ -1.31
SPTLC2-206ENST00000557566 GMNCA6NCL1 334 aa6.88□□□□□ -1.31
SPTLC2-206ENST00000557566 ANKRD65E5RJM6 399 aa6.88□□□□□ -1.31
SPTLC2-206ENST00000557566 FPGTO14772 594 aa6.88□□□□□ -1.31
SPTLC2-206ENST00000557566 MCF2LO15068 1137 aa6.88□□□□□ -1.31
SPTLC2-206ENST00000557566 YY2O15391 372 aa6.88□□□□□ -1.31
SPTLC2-206ENST00000557566 DUX1O43812 170 aa6.88□□□□□ -1.31
SPTLC2-206ENST00000557566 ACSL4O60488 711 aa6.88□□□□□ -1.31
SPTLC2-206ENST00000557566 SRGAP2O75044 1071 aa6.88□□□□□ -1.31
SPTLC2-206ENST00000557566 LUC7L3O95232 432 aaKnown RBP6.88□□□□□ -1.31
SPTLC2-206ENST00000557566 EPHA1P21709 976 aa6.88□□□□□ -1.31
SPTLC2-206ENST00000557566 UGT1A3P35503 534 aa6.88□□□□□ -1.31
SPTLC2-206ENST00000557566 MAGEA1P43355 309 aa6.88□□□□□ -1.31
SPTLC2-206ENST00000557566 RPS24P62847 133 aaKnown RBP6.88□□□□□ -1.31
SPTLC2-206ENST00000557566 MC1RQ01726 317 aa6.88□□□□□ -1.31
SPTLC2-206ENST00000557566 SULT2A1Q06520 285 aa6.88□□□□□ -1.31
SPTLC2-206ENST00000557566 EIF2B5Q13144 721 aaKnown RBP6.88□□□□□ -1.31
SPTLC2-206ENST00000557566 C1orf61Q13536 156 aa6.88□□□□□ -1.31
SPTLC2-206ENST00000557566 PTK2BQ14289 1009 aa6.88□□□□□ -1.31
SPTLC2-206ENST00000557566 SNCBQ16143 134 aa6.88□□□□□ -1.31
SPTLC2-206ENST00000557566 MAN2A1Q16706 1144 aa6.88□□□□□ -1.31
SPTLC2-206ENST00000557566 ZXDCQ2QGD7 858 aaPredicted RBP6.88□□□□□ -1.31
SPTLC2-206ENST00000557566 ACCSLQ4AC99 568 aa6.88□□□□□ -1.31
SPTLC2-206ENST00000557566 FAM133BQ5BKY9 247 aaKnown RBP6.88□□□□□ -1.31
SPTLC2-206ENST00000557566 FSCBQ5H9T9 825 aa6.88□□□□□ -1.31
SPTLC2-206ENST00000557566 MIIPQ5JXC2 388 aa6.88□□□□□ -1.31
SPTLC2-206ENST00000557566 PHF19Q5T6S3 580 aa6.88□□□□□ -1.31
SPTLC2-206ENST00000557566 KLHDC7AQ5VTJ3 777 aa6.88□□□□□ -1.31
SPTLC2-206ENST00000557566 SEL1L3Q68CR1 1132 aa6.88□□□□□ -1.31
SPTLC2-206ENST00000557566 PHACTR4Q8IZ21 702 aa6.88□□□□□ -1.31
SPTLC2-206ENST00000557566 GPATCH11Q8N954 259 aa6.88□□□□□ -1.31
SPTLC2-206ENST00000557566 KYQ8NBH2 561 aa6.88□□□□□ -1.31
SPTLC2-206ENST00000557566 PDCD6IPQ8WUM4 868 aaKnown RBP6.88□□□□□ -1.31
SPTLC2-206ENST00000557566 PBKQ96KB5 322 aa6.88□□□□□ -1.31
SPTLC2-206ENST00000557566 PRICKLE1Q96MT3 831 aaPredicted RBP6.88□□□□□ -1.31
SPTLC2-206ENST00000557566 ANKRD27Q96NW4 1050 aa6.88□□□□□ -1.31
SPTLC2-206ENST00000557566 TAAR9Q96RI9 348 aa6.88□□□□□ -1.31
SPTLC2-206ENST00000557566 LRRC61Q9BV99 259 aa6.88□□□□□ -1.31
SPTLC2-206ENST00000557566 NT5C1AQ9BXI3 368 aa6.88□□□□□ -1.31
SPTLC2-206ENST00000557566 TLR10Q9BXR5 811 aa6.88□□□□□ -1.31
SPTLC2-206ENST00000557566 SLC17A9Q9BYT1 436 aa6.88□□□□□ -1.31
SPTLC2-206ENST00000557566 SLC29A3Q9BZD2 475 aa6.88□□□□□ -1.31
SPTLC2-206ENST00000557566 SLC13A1Q9BZW2 595 aa6.88□□□□□ -1.31
SPTLC2-206ENST00000557566 INTS2Q9H0H0 1204 aaKnown RBP6.88□□□□□ -1.31
SPTLC2-206ENST00000557566 ISCUQ9H1K1 167 aa6.88□□□□□ -1.31
SPTLC2-206ENST00000557566 GPN2Q9H9Y4 310 aaPredicted RBP6.88□□□□□ -1.31
SPTLC2-206ENST00000557566 SRA1Q9HD15 236 aaKnown RBP6.88□□□□□ -1.31
SPTLC2-206ENST00000557566 SLC40A1Q9NP59 571 aa6.88□□□□□ -1.31
SPTLC2-206ENST00000557566 DYRK4Q9NR20 520 aa6.88□□□□□ -1.31
SPTLC2-206ENST00000557566 SIRPGQ9P1W8 387 aa6.88□□□□□ -1.31
SPTLC2-206ENST00000557566 SFMBT1Q9UHJ3 866 aa6.88□□□□□ -1.31
SPTLC2-206ENST00000557566 SLC12A6Q9UHW9 1150 aa6.88□□□□□ -1.31
SPTLC2-206ENST00000557566 ERRFI1Q9UJM3 462 aaPredicted RBP6.88□□□□□ -1.31
SPTLC2-206ENST00000557566 ZFR2Q9UPR6 939 aaKnown RBP6.88□□□□□ -1.31
SPTLC2-206ENST00000557566 SIK3Q9Y2K2 1263 aa6.88□□□□□ -1.31
SPTLC2-206ENST00000557566 KCTD3Q9Y597 815 aa6.88□□□□□ -1.31
SPTLC2-206ENST00000557566 PCDHGA3Q9Y5H0 932 aa6.88□□□□□ -1.31
SPTLC2-206ENST00000557566 RNF215Q9Y6U7 377 aa6.88□□□□□ -1.31
SPTLC2-206ENST00000557566 DCHS2Q6V1P9 2916 aa6.88□□□□□ -1.31
SPTLC2-206ENST00000557566 DIDO1Q9BTC0 2240 aaKnown RBP6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms