RNA–Protein interactions for RNA: ENST00000557358.1

VPS33B-206, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-206ENST00000557358 PRLP01236 227 aa13.77□□□□□ -0.21
VPS33B-206ENST00000557358 EPOP01588 193 aa13.77□□□□□ -0.21
VPS33B-206ENST00000557358 MMP2P08253 660 aa13.77□□□□□ -0.21
VPS33B-206ENST00000557358 NFKB1P19838 968 aa13.77□□□□□ -0.21
VPS33B-206ENST00000557358 BIRC2Q13490 618 aa13.77□□□□□ -0.21
VPS33B-206ENST00000557358 SMAD1Q15797 465 aaKnown RBP13.77□□□□□ -0.21
VPS33B-206ENST00000557358 TPRG1LQ5T0D9 272 aa13.77□□□□□ -0.21
VPS33B-206ENST00000557358 C6orf132Q5T0Z8 1188 aa13.77□□□□□ -0.21
VPS33B-206ENST00000557358 ZDHHC20Q5W0Z9 365 aa13.77□□□□□ -0.21
VPS33B-206ENST00000557358 ADAMTSL4Q6UY14 1074 aa13.77□□□□□ -0.21
VPS33B-206ENST00000557358 KDM7AQ6ZMT4 941 aa13.77□□□□□ -0.21
VPS33B-206ENST00000557358 TECPR1Q7Z6L1 1165 aa13.77□□□□□ -0.21
VPS33B-206ENST00000557358 ZNF567Q8N184 647 aa13.77□□□□□ -0.21
VPS33B-206ENST00000557358 CBARPQ8N350 705 aaPredicted RBP13.77□□□□□ -0.21
VPS33B-206ENST00000557358 OR6C4Q8NGE1 309 aa13.77□□□□□ -0.21
VPS33B-206ENST00000557358 HIC2Q96JB3 615 aa13.77□□□□□ -0.21
VPS33B-206ENST00000557358 CNTNAP3BQ96NU0 1288 aa13.77□□□□□ -0.21
VPS33B-206ENST00000557358 GSDMCQ9BYG8 508 aa13.77□□□□□ -0.21
VPS33B-206ENST00000557358 CNTNAP3Q9BZ76 1288 aa13.77□□□□□ -0.21
VPS33B-206ENST00000557358 ABCG8Q9H221 673 aa13.77□□□□□ -0.21
VPS33B-206ENST00000557358 TRABDQ9H4I3 376 aa13.77□□□□□ -0.21
VPS33B-206ENST00000557358 CARS2Q9HA77 564 aaKnown RBP13.77□□□□□ -0.21
VPS33B-206ENST00000557358 HACD3Q9P035 362 aa13.77□□□□□ -0.21
VPS33B-206ENST00000557358 GULP1Q9UBP9 304 aa13.77□□□□□ -0.21
VPS33B-206ENST00000557358 TRIM10Q9UDY6 481 aa13.77□□□□□ -0.21
VPS33B-206ENST00000557358 GPR34Q9UPC5 381 aa13.77□□□□□ -0.21
VPS33B-206ENST00000557358 AAR2Q9Y312 384 aaKnown RBP13.77□□□□□ -0.21
VPS33B-206ENST00000557358 TMEM202A6NGA9 273 aa13.76□□□□□ -0.21
VPS33B-206ENST00000557358 YY2O15391 372 aa13.76□□□□□ -0.21
VPS33B-206ENST00000557358 KCNN4O15554 427 aa13.76□□□□□ -0.21
VPS33B-206ENST00000557358 ASMTLO95671 621 aa13.76□□□□□ -0.21
VPS33B-206ENST00000557358 TOP3BO95985 862 aaKnown RBP13.76□□□□□ -0.21
VPS33B-206ENST00000557358 SLC4A1P02730 911 aa13.76□□□□□ -0.21
VPS33B-206ENST00000557358 PYGMP11217 842 aa13.76□□□□□ -0.21
VPS33B-206ENST00000557358 GM2AP17900 193 aa13.76□□□□□ -0.21
VPS33B-206ENST00000557358 HLA-DPA1P20036 260 aa13.76□□□□□ -0.21
VPS33B-206ENST00000557358 RBL1P28749 1068 aa13.76□□□□□ -0.21
VPS33B-206ENST00000557358 ACTN2P35609 894 aa13.76□□□□□ -0.21
VPS33B-206ENST00000557358 SPINT3P49223 89 aa13.76□□□□□ -0.21
VPS33B-206ENST00000557358 WNT3AP56704 352 aa13.76□□□□□ -0.21
VPS33B-206ENST00000557358 ADCY2Q08462 1091 aa13.76□□□□□ -0.21
VPS33B-206ENST00000557358 WASHC5Q12768 1159 aa13.76□□□□□ -0.21
VPS33B-206ENST00000557358 RPS6KA1Q15418 735 aa13.76□□□□□ -0.21
VPS33B-206ENST00000557358 CDKN3Q16667 212 aa13.76□□□□□ -0.21
VPS33B-206ENST00000557358 CCNI2Q6ZMN8 369 aaPredicted RBP13.76□□□□□ -0.21
VPS33B-206ENST00000557358 ARL10Q8N8L6 244 aa13.76□□□□□ -0.21
VPS33B-206ENST00000557358 SPATA22Q8NHS9 363 aa13.76□□□□□ -0.21
VPS33B-206ENST00000557358 WDR48Q8TAF3 677 aa13.76□□□□□ -0.21
VPS33B-206ENST00000557358 IFI44Q8TCB0 444 aa13.76□□□□□ -0.21
VPS33B-206ENST00000557358 MAPK15Q8TD08 544 aa13.76□□□□□ -0.21
VPS33B-206ENST00000557358 OR1E3Q8WZA6 343 aa13.76□□□□□ -0.21
VPS33B-206ENST00000557358 ALG3Q92685 438 aa13.76□□□□□ -0.21
VPS33B-206ENST00000557358 PDXPQ96GD0 296 aa13.76□□□□□ -0.21
VPS33B-206ENST00000557358 RIOK2Q9BVS4 552 aaKnown RBP13.76□□□□□ -0.21
VPS33B-206ENST00000557358 SPATA16Q9BXB7 569 aa13.76□□□□□ -0.21
VPS33B-206ENST00000557358 FRMD8P1Q9BZ68 369 aaPredicted RBP13.76□□□□□ -0.21
VPS33B-206ENST00000557358 TCEAL2Q9H3H9 227 aaPredicted RBP13.76□□□□□ -0.21
VPS33B-206ENST00000557358 SUDS3Q9H7L9 328 aaPredicted RBP13.76□□□□□ -0.21
VPS33B-206ENST00000557358 FGF22Q9HCT0 170 aa13.76□□□□□ -0.21
VPS33B-206ENST00000557358 UBP1Q9NZI7 540 aa13.76□□□□□ -0.21
VPS33B-206ENST00000557358 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.76□□□□□ -0.21
VPS33B-206ENST00000557358 WASF3Q9UPY6 502 aa13.76□□□□□ -0.21
VPS33B-206ENST00000557358 ZKSCAN5Q9Y2L8 839 aa13.76□□□□□ -0.21
VPS33B-206ENST00000557358 PTPRBP23467 1997 aa13.75□□□□□ -0.21
VPS33B-206ENST00000557358 GCATO75600 419 aa13.75□□□□□ -0.21
VPS33B-206ENST00000557358 FGF1P05230 155 aa13.75□□□□□ -0.21
VPS33B-206ENST00000557358 PROS1P07225 676 aa13.75□□□□□ -0.21
VPS33B-206ENST00000557358 IVLP07476 585 aa13.75□□□□□ -0.21
VPS33B-206ENST00000557358 GNPDA1P46926 289 aa13.75□□□□□ -0.21
VPS33B-206ENST00000557358 HES3Q5TGS1 186 aa13.75□□□□□ -0.21
VPS33B-206ENST00000557358 PDPK2PQ6A1A2 396 aa13.75□□□□□ -0.21
VPS33B-206ENST00000557358 DOK6Q6PKX4 331 aa13.75□□□□□ -0.21
VPS33B-206ENST00000557358 ARHGEF18Q6ZSZ5 1173 aa13.75□□□□□ -0.21
VPS33B-206ENST00000557358 EFL1Q7Z2Z2 1120 aaKnown RBP13.75□□□□□ -0.21
VPS33B-206ENST00000557358 LYSMD3Q7Z3D4 306 aa13.75□□□□□ -0.21
VPS33B-206ENST00000557358 GALNT13Q8IUC8 556 aa13.75□□□□□ -0.21
VPS33B-206ENST00000557358 PDCD7Q8N8D1 485 aaKnown RBP13.75□□□□□ -0.21
VPS33B-206ENST00000557358 FAM46DQ8NEK8 389 aa13.75□□□□□ -0.21
VPS33B-206ENST00000557358 IPMKQ8NFU5 416 aa13.75□□□□□ -0.21
VPS33B-206ENST00000557358 SCAMP4Q969E2 229 aa13.75□□□□□ -0.21
VPS33B-206ENST00000557358 HES6Q96HZ4 224 aa13.75□□□□□ -0.21
VPS33B-206ENST00000557358 ZSCAN5AQ9BUG6 496 aa13.75□□□□□ -0.21
VPS33B-206ENST00000557358 BOCQ9BWV1 1114 aa13.75□□□□□ -0.21
VPS33B-206ENST00000557358 GBA3Q9H227 469 aa13.75□□□□□ -0.21
VPS33B-206ENST00000557358 DPEP2Q9H4A9 486 aa13.75□□□□□ -0.21
VPS33B-206ENST00000557358 LZTFL1Q9NQ48 299 aa13.75□□□□□ -0.21
VPS33B-206ENST00000557358 TRNAU1APQ9NX07 287 aaKnown RBP13.75□□□□□ -0.21
VPS33B-206ENST00000557358 SIRPGQ9P1W8 387 aa13.75□□□□□ -0.21
VPS33B-206ENST00000557358 PADI4Q9UM07 663 aa13.75□□□□□ -0.21
VPS33B-206ENST00000557358 PACSIN2Q9UNF0 486 aaPredicted RBP13.75□□□□□ -0.21
VPS33B-206ENST00000557358 SHOC2Q9UQ13 582 aa13.75□□□□□ -0.21
VPS33B-206ENST00000557358 CLCA2Q9UQC9 943 aa13.75□□□□□ -0.21
VPS33B-206ENST00000557358 PPP2R2CQ9Y2T4 447 aa13.75□□□□□ -0.21
VPS33B-206ENST00000557358 PKP3Q9Y446 797 aa13.75□□□□□ -0.21
VPS33B-206ENST00000557358 ZNF711Q9Y462 761 aa13.75□□□□□ -0.21
VPS33B-206ENST00000557358 CAPN6Q9Y6Q1 641 aa13.75□□□□□ -0.21
VPS33B-206ENST00000557358 EME2A4GXA9 379 aaPredicted RBP13.74□□□□□ -0.21
VPS33B-206ENST00000557358 INPP4BO15327 924 aa13.74□□□□□ -0.21
VPS33B-206ENST00000557358 ZSCAN12O43309 604 aa13.74□□□□□ -0.21
VPS33B-206ENST00000557358 DCDC1P59894 354 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms