RNA–Protein interactions for RNA: ENST00000557352.1

VRK1-207, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-207ENST00000557352 GPATCH4Q5T3I0 446 aaKnown RBP4.06□□□□□ -1.76
VRK1-207ENST00000557352 STXBP5Q5T5C0 1151 aa4.06□□□□□ -1.76
VRK1-207ENST00000557352 TXNDC8Q6A555 127 aa4.06□□□□□ -1.76
VRK1-207ENST00000557352 KCTD18Q6PI47 426 aaPredicted RBP4.06□□□□□ -1.76
VRK1-207ENST00000557352 ZNF852Q6ZMS4 543 aa4.06□□□□□ -1.76
VRK1-207ENST00000557352 NOL8Q76FK4 1167 aaKnown RBP4.06□□□□□ -1.76
VRK1-207ENST00000557352 TDRPQ86YL5 185 aa4.06□□□□□ -1.76
VRK1-207ENST00000557352 SPATA6LQ8N4H0 392 aa4.06□□□□□ -1.76
VRK1-207ENST00000557352 ZNF583Q96ND8 569 aa4.06□□□□□ -1.76
VRK1-207ENST00000557352 CMKLR1Q99788 373 aa4.06□□□□□ -1.76
VRK1-207ENST00000557352 SH3GL2Q99962 352 aa4.06□□□□□ -1.76
VRK1-207ENST00000557352 RBM4Q9BWF3 364 aaKnown RBP4.06□□□□□ -1.76
VRK1-207ENST00000557352 GPR108Q9NPR9 543 aa4.06□□□□□ -1.76
VRK1-207ENST00000557352 HSF4Q9ULV5 492 aa4.06□□□□□ -1.76
VRK1-207ENST00000557352 PCDHGB3Q9Y5G1 929 aa4.06□□□□□ -1.76
VRK1-207ENST00000557352 FYCO1Q9BQS8 1478 aa4.05□□□□□ -1.76
VRK1-207ENST00000557352 ANTXRLA6NF34 631 aa4.05□□□□□ -1.76
VRK1-207ENST00000557352 IFNL4K9M1U5 179 aa4.05□□□□□ -1.76
VRK1-207ENST00000557352 GUCY1B2O75343 617 aa4.05□□□□□ -1.76
VRK1-207ENST00000557352 TCEA3O75764 348 aa4.05□□□□□ -1.76
VRK1-207ENST00000557352 BDKRB2P30411 391 aa4.05□□□□□ -1.76
VRK1-207ENST00000557352 PGM1P36871 562 aa4.05□□□□□ -1.76
VRK1-207ENST00000557352 CCR5P51681 352 aa4.05□□□□□ -1.76
VRK1-207ENST00000557352 NR0B1P51843 470 aaKnown RBP4.05□□□□□ -1.76
VRK1-207ENST00000557352 CDH15P55291 814 aa4.05□□□□□ -1.76
VRK1-207ENST00000557352 PDE1BQ01064 536 aa4.05□□□□□ -1.76
VRK1-207ENST00000557352 OS9Q13438 667 aaPredicted RBP4.05□□□□□ -1.76
VRK1-207ENST00000557352 PPP2R5BQ15173 497 aa4.05□□□□□ -1.76
VRK1-207ENST00000557352 RNPS1Q15287 305 aaKnown RBP4.05□□□□□ -1.76
VRK1-207ENST00000557352 TMEM30BQ3MIR4 351 aa4.05□□□□□ -1.76
VRK1-207ENST00000557352 HIST2H2BDQ6DRA6 164 aa4.05□□□□□ -1.76
VRK1-207ENST00000557352 METTL2BQ6P1Q9 378 aaKnown RBP4.05□□□□□ -1.76
VRK1-207ENST00000557352 LCTLQ6UWM7 567 aa4.05□□□□□ -1.76
VRK1-207ENST00000557352 KCTD8Q6ZWB6 473 aa4.05□□□□□ -1.76
VRK1-207ENST00000557352 HUS1BQ8NHY5 278 aa4.05□□□□□ -1.76
VRK1-207ENST00000557352 FAM76AQ8TAV0 307 aa4.05□□□□□ -1.76
VRK1-207ENST00000557352 NOC3LQ8WTT2 800 aaKnown RBP4.05□□□□□ -1.76
VRK1-207ENST00000557352 METTL2AQ96IZ6 378 aaKnown RBP4.05□□□□□ -1.76
VRK1-207ENST00000557352 LBHD1Q9BQE6 289 aaPredicted RBP4.05□□□□□ -1.76
VRK1-207ENST00000557352 SYT17Q9BSW7 474 aa4.05□□□□□ -1.76
VRK1-207ENST00000557352 EGLN1Q9GZT9 426 aa4.05□□□□□ -1.76
VRK1-207ENST00000557352 INTS2Q9H0H0 1204 aaKnown RBP4.05□□□□□ -1.76
VRK1-207ENST00000557352 TKTL2Q9H0I9 626 aa4.05□□□□□ -1.76
VRK1-207ENST00000557352 NDST4Q9H3R1 872 aa4.05□□□□□ -1.76
VRK1-207ENST00000557352 PPP1R3EQ9H7J1 279 aa4.05□□□□□ -1.76
VRK1-207ENST00000557352 BEX4Q9NWD9 120 aaPredicted RBP4.05□□□□□ -1.76
VRK1-207ENST00000557352 HCN3Q9P1Z3 774 aa4.05□□□□□ -1.76
VRK1-207ENST00000557352 CNOT7Q9UIV1 285 aaKnown RBP4.05□□□□□ -1.76
VRK1-207ENST00000557352 TTC7AQ9ULT0 858 aaPredicted RBP4.05□□□□□ -1.76
VRK1-207ENST00000557352 OR2W1Q9Y3N9 320 aa4.05□□□□□ -1.76
VRK1-207ENST00000557352 MMP24Q9Y5R2 645 aa4.05□□□□□ -1.76
VRK1-207ENST00000557352 HECW1Q76N89 1606 aa4.05□□□□□ -1.76
VRK1-207ENST00000557352 PCF11O94913 1555 aaKnown RBP4.05□□□□□ -1.76
VRK1-207ENST00000557352 TIAM1Q13009 1591 aa4.05□□□□□ -1.76
VRK1-207ENST00000557352 CLASP1Q7Z460 1538 aa4.05□□□□□ -1.76
VRK1-207ENST00000557352 FMN1Q68DA7 1419 aa4.04□□□□□ -1.76
VRK1-207ENST00000557352 DVL1O14640 695 aa4.04□□□□□ -1.76
VRK1-207ENST00000557352 TAF6P49848 677 aa4.04□□□□□ -1.76
VRK1-207ENST00000557352 DVL1P1P54792 670 aaPredicted RBP4.04□□□□□ -1.76
VRK1-207ENST00000557352 ISL1P61371 349 aa4.04□□□□□ -1.76
VRK1-207ENST00000557352 UBE3AQ05086 875 aa4.04□□□□□ -1.76
VRK1-207ENST00000557352 KRT71Q3SY84 523 aa4.04□□□□□ -1.76
VRK1-207ENST00000557352 PDSS1Q5T2R2 415 aa4.04□□□□□ -1.76
VRK1-207ENST00000557352 KRTAP5-4Q6L8H1 288 aa4.04□□□□□ -1.76
VRK1-207ENST00000557352 SLC22A25Q6T423 547 aa4.04□□□□□ -1.76
VRK1-207ENST00000557352 ASB18Q6ZVZ8 466 aa4.04□□□□□ -1.76
VRK1-207ENST00000557352 TAS1R2Q8TE23 839 aa4.04□□□□□ -1.76
VRK1-207ENST00000557352 F2RL3Q96RI0 385 aa4.04□□□□□ -1.76
VRK1-207ENST00000557352 PCYT2Q99447 389 aa4.04□□□□□ -1.76
VRK1-207ENST00000557352 MTERF1Q99551 399 aaKnown RBP4.04□□□□□ -1.76
VRK1-207ENST00000557352 ISCA1Q9BUE6 129 aa4.04□□□□□ -1.76
VRK1-207ENST00000557352 KRTAP4-4Q9BYR3 166 aa4.04□□□□□ -1.76
VRK1-207ENST00000557352 PLEKHA4Q9H4M7 779 aa4.04□□□□□ -1.76
VRK1-207ENST00000557352 FKRPQ9H9S5 495 aa4.04□□□□□ -1.76
VRK1-207ENST00000557352 RIC8AQ9NPQ8 531 aa4.04□□□□□ -1.76
VRK1-207ENST00000557352 HINT3Q9NQE9 182 aaKnown RBP4.04□□□□□ -1.76
VRK1-207ENST00000557352 HCFC1R1Q9NWW0 138 aa4.04□□□□□ -1.76
VRK1-207ENST00000557352 FAF1Q9UNN5 650 aaPredicted RBP4.04□□□□□ -1.76
VRK1-207ENST00000557352 LOXL2Q9Y4K0 774 aa4.04□□□□□ -1.76
VRK1-207ENST00000557352 GAGE10A6NGK3 116 aa4.03□□□□□ -1.76
VRK1-207ENST00000557352 PMS2P5A8MQ11 134 aa4.03□□□□□ -1.76
VRK1-207ENST00000557352 TAF4O00268 1085 aa4.03□□□□□ -1.76
VRK1-207ENST00000557352 PAX1P15863 534 aa4.03□□□□□ -1.76
VRK1-207ENST00000557352 PSMC2P35998 433 aaKnown RBP4.03□□□□□ -1.76
VRK1-207ENST00000557352 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.03□□□□□ -1.76
VRK1-207ENST00000557352 GTF2H2Q13888 395 aa4.03□□□□□ -1.76
VRK1-207ENST00000557352 CCDC96Q2M329 555 aa4.03□□□□□ -1.76
VRK1-207ENST00000557352 GGNBP1Q5YKI7 109 aa4.03□□□□□ -1.76
VRK1-207ENST00000557352 GTF2H2CQ6P1K8 395 aa4.03□□□□□ -1.76
VRK1-207ENST00000557352 LRRC8DQ7L1W4 858 aa4.03□□□□□ -1.76
VRK1-207ENST00000557352 DGLUCYQ7Z3D6 616 aa4.03□□□□□ -1.76
VRK1-207ENST00000557352 KRTAP7-1Q8IUC3 87 aa4.03□□□□□ -1.76
VRK1-207ENST00000557352 CPOQ8IVL8 374 aa4.03□□□□□ -1.76
VRK1-207ENST00000557352 KLHDC9Q8NEP7 349 aa4.03□□□□□ -1.76
VRK1-207ENST00000557352 HERVK_113Q902F9 699 aa4.03□□□□□ -1.76
VRK1-207ENST00000557352 LITAFQ99732 161 aa4.03□□□□□ -1.76
VRK1-207ENST00000557352 GLIS2Q9BZE0 524 aaPredicted RBP4.03□□□□□ -1.76
VRK1-207ENST00000557352 BARHL1Q9BZE3 327 aa4.03□□□□□ -1.76
VRK1-207ENST00000557352 SLC25A10Q9UBX3 287 aaPredicted RBP4.03□□□□□ -1.76
VRK1-207ENST00000557352 DISP1Q96F81 1524 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms