RNA–Protein interactions for RNA: ENST00000556399.5

ARHGEF40-207, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 4,902 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-207ENST00000556399 PAGE2BQ5JRK9 111 aa15□□□□□ -0.01
ARHGEF40-207ENST00000556399 KIAA0930Q6ICG6 404 aaPredicted RBP15□□□□□ -0.01
ARHGEF40-207ENST00000556399 C11orf74Q86VG3 221 aa15□□□□□ -0.01
ARHGEF40-207ENST00000556399 DCBLD1Q8N8Z6 715 aa15□□□□□ -0.01
ARHGEF40-207ENST00000556399 PDPRQ8NCN5 879 aa15□□□□□ -0.01
ARHGEF40-207ENST00000556399 TRPM4Q8TD43 1214 aa15□□□□□ -0.01
ARHGEF40-207ENST00000556399 SELENOMQ8WWX9 145 aa15□□□□□ -0.01
ARHGEF40-207ENST00000556399 SPATA17Q96L03 361 aa15□□□□□ -0.01
ARHGEF40-207ENST00000556399 RAB6CQ9H0N0 254 aa15□□□□□ -0.01
ARHGEF40-207ENST00000556399 USP54Q70EL1 1684 aa15□□□□□ -0.01
ARHGEF40-207ENST00000556399 HNRNPCL2B2RXH8 293 aa15□□□□□ -0.01
ARHGEF40-207ENST00000556399 UBXN8O00124 270 aa15□□□□□ -0.01
ARHGEF40-207ENST00000556399 DDNO94850 711 aaPredicted RBP15□□□□□ -0.01
ARHGEF40-207ENST00000556399 EPN2O95208 641 aa15□□□□□ -0.01
ARHGEF40-207ENST00000556399 OTCP00480 354 aa15□□□□□ -0.01
ARHGEF40-207ENST00000556399 ALOX5P09917 674 aa15□□□□□ -0.01
ARHGEF40-207ENST00000556399 MTHFD1P11586 935 aaKnown RBP15□□□□□ -0.01
ARHGEF40-207ENST00000556399 SCNN1AP37088 669 aa15□□□□□ -0.01
ARHGEF40-207ENST00000556399 CHRNA4P43681 627 aa15□□□□□ -0.01
ARHGEF40-207ENST00000556399 FTHL17Q9BXU8 183 aa15□□□□□ -0.01
ARHGEF40-207ENST00000556399 TRPV2Q9Y5S1 764 aa15□□□□□ -0.01
ARHGEF40-207ENST00000556399 NRG1Q02297 640 aaPredicted RBP14.99□□□□□ -0.01
ARHGEF40-207ENST00000556399 INCA1Q0VD86 236 aa14.99□□□□□ -0.01
ARHGEF40-207ENST00000556399 ELMOD1Q8N336 334 aa14.99□□□□□ -0.01
ARHGEF40-207ENST00000556399 EXOC2Q96KP1 924 aa14.99□□□□□ -0.01
ARHGEF40-207ENST00000556399 ZFP42Q96MM3 310 aa14.99□□□□□ -0.01
ARHGEF40-207ENST00000556399 TINF2Q9BSI4 451 aa14.99□□□□□ -0.01
ARHGEF40-207ENST00000556399 OXCT2Q9BYC2 517 aaPredicted RBP14.99□□□□□ -0.01
ARHGEF40-207ENST00000556399 A8MT66 165 aa14.99□□□□□ -0.01
ARHGEF40-207ENST00000556399 SERPIND1P05546 499 aa14.99□□□□□ -0.01
ARHGEF40-207ENST00000556399 GMPRP36959 345 aa14.99□□□□□ -0.01
ARHGEF40-207ENST00000556399 DSC2Q02487 901 aa14.99□□□□□ -0.01
ARHGEF40-207ENST00000556399 MYLK3Q32MK0 819 aa14.99□□□□□ -0.01
ARHGEF40-207ENST00000556399 MTERF3Q96E29 417 aa14.99□□□□□ -0.01
ARHGEF40-207ENST00000556399 CHID1Q9BWS9 393 aa14.99□□□□□ -0.01
ARHGEF40-207ENST00000556399 NUAK2Q9H093 628 aa14.99□□□□□ -0.01
ARHGEF40-207ENST00000556399 CAPN14A8MX76 684 aa14.99□□□□□ -0.01
ARHGEF40-207ENST00000556399 H3BMM5 538 aa14.99□□□□□ -0.01
ARHGEF40-207ENST00000556399 RPP40O75818 363 aaKnown RBP14.99□□□□□ -0.01
ARHGEF40-207ENST00000556399 MYCP01106 439 aaPredicted RBP14.99□□□□□ -0.01
ARHGEF40-207ENST00000556399 IFNA14P01570 189 aa14.99□□□□□ -0.01
ARHGEF40-207ENST00000556399 DGKAP23743 735 aa14.99□□□□□ -0.01
ARHGEF40-207ENST00000556399 HIST2H2ACQ16777 129 aaPredicted RBP14.99□□□□□ -0.01
ARHGEF40-207ENST00000556399 CCDC142Q17RM4 750 aa14.99□□□□□ -0.01
ARHGEF40-207ENST00000556399 OGFRL1Q5TC84 451 aaPredicted RBP14.99□□□□□ -0.01
ARHGEF40-207ENST00000556399 SDHAF4Q5VUM1 108 aa14.99□□□□□ -0.01
ARHGEF40-207ENST00000556399 HIST2H2AA3Q6FI13 130 aa14.99□□□□□ -0.01
ARHGEF40-207ENST00000556399 SYT12Q8IV01 421 aa14.99□□□□□ -0.01
ARHGEF40-207ENST00000556399 PNPT1Q8TCS8 783 aaKnown RBP14.99□□□□□ -0.01
ARHGEF40-207ENST00000556399 EMID1Q96A84 441 aaPredicted RBP14.99□□□□□ -0.01
ARHGEF40-207ENST00000556399 C12orf42Q96LP6 360 aa14.99□□□□□ -0.01
ARHGEF40-207ENST00000556399 OR52E6Q96RD3 313 aa14.99□□□□□ -0.01
ARHGEF40-207ENST00000556399 TSPAN18Q96SJ8 248 aa14.99□□□□□ -0.01
ARHGEF40-207ENST00000556399 SLC25A51Q9H1U9 297 aa14.99□□□□□ -0.01
ARHGEF40-207ENST00000556399 ARL15Q9NXU5 204 aa14.99□□□□□ -0.01
ARHGEF40-207ENST00000556399 LMCD1Q9NZU5 365 aa14.99□□□□□ -0.01
ARHGEF40-207ENST00000556399 SH3BP1Q9Y3L3 701 aa14.99□□□□□ -0.01
ARHGEF40-207ENST00000556399 BHMG1C9JSJ3 638 aaPredicted RBP14.99□□□□□ -0.01
ARHGEF40-207ENST00000556399 PIK3CGP48736 1102 aa14.99□□□□□ -0.01
ARHGEF40-207ENST00000556399 PWP1Q13610 501 aa14.99□□□□□ -0.01
ARHGEF40-207ENST00000556399 OR9I1Q8NGQ6 314 aa14.99□□□□□ -0.01
ARHGEF40-207ENST00000556399 PCED1BQ96HM7 432 aa14.99□□□□□ -0.01
ARHGEF40-207ENST00000556399 REXO5Q96IC2 774 aaKnown RBP14.99□□□□□ -0.01
ARHGEF40-207ENST00000556399 CD320Q9NPF0 282 aa14.99□□□□□ -0.01
ARHGEF40-207ENST00000556399 A0A1B0GUL6 1792 aa14.99□□□□□ -0.01
ARHGEF40-207ENST00000556399 ZBTB14O43829 449 aa14.98□□□□□ -0.01
ARHGEF40-207ENST00000556399 SORBS2O94875 1100 aaKnown RBP14.98□□□□□ -0.01
ARHGEF40-207ENST00000556399 PRKCQQ04759 706 aa14.98□□□□□ -0.01
ARHGEF40-207ENST00000556399 SLC10A2Q12908 348 aaPredicted RBP14.98□□□□□ -0.01
ARHGEF40-207ENST00000556399 IKBKEQ14164 716 aa14.98□□□□□ -0.01
ARHGEF40-207ENST00000556399 CRY1Q16526 586 aa14.98□□□□□ -0.01
ARHGEF40-207ENST00000556399 FAM91A1Q658Y4 838 aa14.98□□□□□ -0.01
ARHGEF40-207ENST00000556399 PACRGLQ8N7B6 248 aa14.98□□□□□ -0.01
ARHGEF40-207ENST00000556399 E9PAM4 449 aa14.98□□□□□ -0.01
ARHGEF40-207ENST00000556399 HCRTO43612 131 aa14.98□□□□□ -0.01
ARHGEF40-207ENST00000556399 YAP1P46937 504 aaKnown RBP14.98□□□□□ -0.01
ARHGEF40-207ENST00000556399 PAGE2Q7Z2X7 111 aa14.98□□□□□ -0.01
ARHGEF40-207ENST00000556399 DEFB132Q7Z7B7 95 aa14.98□□□□□ -0.01
ARHGEF40-207ENST00000556399 ADAMTSL2Q86TH1 951 aa14.98□□□□□ -0.01
ARHGEF40-207ENST00000556399 MOCOSQ96EN8 888 aa14.98□□□□□ -0.01
ARHGEF40-207ENST00000556399 CPA4Q9UI42 421 aa14.98□□□□□ -0.01
ARHGEF40-207ENST00000556399 LZTS3O60299 673 aaPredicted RBP14.98□□□□□ -0.01
ARHGEF40-207ENST00000556399 ZBTB48P10074 688 aaPredicted RBP14.98□□□□□ -0.01
ARHGEF40-207ENST00000556399 MBL2P11226 248 aaPredicted RBP14.98□□□□□ -0.01
ARHGEF40-207ENST00000556399 EPB42P16452 691 aa14.98□□□□□ -0.01
ARHGEF40-207ENST00000556399 BRCC3P46736 316 aa14.98□□□□□ -0.01
ARHGEF40-207ENST00000556399 CRYBB1P53674 252 aaPredicted RBP14.98□□□□□ -0.01
ARHGEF40-207ENST00000556399 BNIP3Q12983 259 aa14.98□□□□□ -0.01
ARHGEF40-207ENST00000556399 TJAP1Q5JTD0 557 aa14.98□□□□□ -0.01
ARHGEF40-207ENST00000556399 FCRL3Q96P31 734 aaPredicted RBP14.98□□□□□ -0.01
ARHGEF40-207ENST00000556399 RBM4BQ9BQ04 359 aaKnown RBP14.98□□□□□ -0.01
ARHGEF40-207ENST00000556399 GPATCH1Q9BRR8 931 aaKnown RBP14.98□□□□□ -0.01
ARHGEF40-207ENST00000556399 RBM4Q9BWF3 364 aaKnown RBP14.98□□□□□ -0.01
ARHGEF40-207ENST00000556399 PDGFDQ9GZP0 370 aaPredicted RBP14.98□□□□□ -0.01
ARHGEF40-207ENST00000556399 TRPM5Q9NZQ8 1165 aa14.98□□□□□ -0.01
ARHGEF40-207ENST00000556399 IMPDH1P20839 514 aa14.98□□□□□ -0.01
ARHGEF40-207ENST00000556399 HOXD10P28358 340 aa14.98□□□□□ -0.01
ARHGEF40-207ENST00000556399 CEACAM7Q14002 265 aa14.98□□□□□ -0.01
ARHGEF40-207ENST00000556399 AP5B1Q2VPB7 878 aa14.98□□□□□ -0.01
ARHGEF40-207ENST00000556399 PRAMEF19Q5SWL8 479 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms