RNA–Protein interactions for RNA: ENST00000556285.1

TGFB3-204, Transcript of transforming growth factor beta 3, humanhuman

TSL 1 (best) BASIC

Gene TGFB3, Length 1,280 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB3-204ENST00000556285 EXTL1Q92935 676 aa13.25□□□□□ -0.29
TGFB3-204ENST00000556285 SCAMP4Q969E2 229 aa13.25□□□□□ -0.29
TGFB3-204ENST00000556285 PMEPA1Q969W9 287 aa13.25□□□□□ -0.29
TGFB3-204ENST00000556285 MCCC1Q96RQ3 725 aaPredicted RBP13.25□□□□□ -0.29
TGFB3-204ENST00000556285 AGAP2Q99490 1192 aa13.25□□□□□ -0.29
TGFB3-204ENST00000556285 SEMA3CQ99985 751 aa13.25□□□□□ -0.29
TGFB3-204ENST00000556285 FUCA2Q9BTY2 467 aa13.25□□□□□ -0.29
TGFB3-204ENST00000556285 NUP85Q9BW27 656 aa13.25□□□□□ -0.29
TGFB3-204ENST00000556285 GSDMCQ9BYG8 508 aa13.25□□□□□ -0.29
TGFB3-204ENST00000556285 ABCG8Q9H221 673 aa13.25□□□□□ -0.29
TGFB3-204ENST00000556285 ANAPC7Q9UJX3 599 aa13.25□□□□□ -0.29
TGFB3-204ENST00000556285 SLC17A4Q9Y2C5 497 aa13.25□□□□□ -0.29
TGFB3-204ENST00000556285 PPIL1Q9Y3C6 166 aa13.25□□□□□ -0.29
TGFB3-204ENST00000556285 COL12A1Q99715 3063 aa13.24□□□□□ -0.29
TGFB3-204ENST00000556285 A0A087X0T9 212 aa13.24□□□□□ -0.29
TGFB3-204ENST00000556285 RHPN2P1A8MT19 583 aa13.24□□□□□ -0.29
TGFB3-204ENST00000556285 PPM1DO15297 605 aa13.24□□□□□ -0.29
TGFB3-204ENST00000556285 MFSD11O43934 449 aa13.24□□□□□ -0.29
TGFB3-204ENST00000556285 FZD6O60353 706 aa13.24□□□□□ -0.29
TGFB3-204ENST00000556285 SERPINC1P01008 464 aa13.24□□□□□ -0.29
TGFB3-204ENST00000556285 CYP1A2P05177 515 aa13.24□□□□□ -0.29
TGFB3-204ENST00000556285 FAM228BP0C875 321 aa13.24□□□□□ -0.29
TGFB3-204ENST00000556285 CYP2A6P11509 494 aaPredicted RBP13.24□□□□□ -0.29
TGFB3-204ENST00000556285 ITGB6P18564 788 aa13.24□□□□□ -0.29
TGFB3-204ENST00000556285 CD1CP29017 333 aa13.24□□□□□ -0.29
TGFB3-204ENST00000556285 PBX1P40424 430 aa13.24□□□□□ -0.29
TGFB3-204ENST00000556285 ARSEP51690 589 aa13.24□□□□□ -0.29
TGFB3-204ENST00000556285 CDH6P55285 790 aa13.24□□□□□ -0.29
TGFB3-204ENST00000556285 CYP4F2P78329 520 aa13.24□□□□□ -0.29
TGFB3-204ENST00000556285 DSC2Q02487 901 aa13.24□□□□□ -0.29
TGFB3-204ENST00000556285 PTSQ03393 145 aa13.24□□□□□ -0.29
TGFB3-204ENST00000556285 ITKQ08881 620 aa13.24□□□□□ -0.29
TGFB3-204ENST00000556285 ILF3Q12906 894 aaKnown RBP eCLIP13.24□□□□□ -0.29
TGFB3-204ENST00000556285 TSR1Q2NL82 804 aaKnown RBP13.24□□□□□ -0.29
TGFB3-204ENST00000556285 LRRC66Q68CR7 880 aa13.24□□□□□ -0.29
TGFB3-204ENST00000556285 PIM3Q86V86 326 aa13.24□□□□□ -0.29
TGFB3-204ENST00000556285 NIPA2Q8N8Q9 360 aa13.24□□□□□ -0.29
TGFB3-204ENST00000556285 CPLX3Q8WVH0 158 aa13.24□□□□□ -0.29
TGFB3-204ENST00000556285 JPH3Q8WXH2 748 aaPredicted RBP13.24□□□□□ -0.29
TGFB3-204ENST00000556285 TRNAU1APQ9NX07 287 aaKnown RBP13.24□□□□□ -0.29
TGFB3-204ENST00000556285 PCYT1BQ9Y5K3 369 aaPredicted RBP13.24□□□□□ -0.29
TGFB3-204ENST00000556285 TRBV23OR9-2A0A075B6M9 112 aa13.23□□□□□ -0.29
TGFB3-204ENST00000556285 IGHV5-10-1A0A0J9YXX1 117 aa13.23□□□□□ -0.29
TGFB3-204ENST00000556285 A0A1W2PQ67 120 aa13.23□□□□□ -0.29
TGFB3-204ENST00000556285 PSMD11O00231 422 aa13.23□□□□□ -0.29
TGFB3-204ENST00000556285 CPNE6O95741 557 aa13.23□□□□□ -0.29
TGFB3-204ENST00000556285 EML2O95834 649 aa13.23□□□□□ -0.29
TGFB3-204ENST00000556285 IVLP07476 585 aa13.23□□□□□ -0.29
TGFB3-204ENST00000556285 LIPCP11150 499 aa13.23□□□□□ -0.29
TGFB3-204ENST00000556285 MPSTP25325 297 aa13.23□□□□□ -0.29
TGFB3-204ENST00000556285 CSF2RBP32927 897 aa13.23□□□□□ -0.29
TGFB3-204ENST00000556285 GJC1P36383 396 aa13.23□□□□□ -0.29
TGFB3-204ENST00000556285 SSR1P43307 286 aaKnown RBP13.23□□□□□ -0.29
TGFB3-204ENST00000556285 GPR1P46091 355 aa13.23□□□□□ -0.29
TGFB3-204ENST00000556285 DPTQ07507 201 aa13.23□□□□□ -0.29
TGFB3-204ENST00000556285 NFATC3Q12968 1075 aa13.23□□□□□ -0.29
TGFB3-204ENST00000556285 KRT81Q14533 505 aa13.23□□□□□ -0.29
TGFB3-204ENST00000556285 NR1D2Q14995 579 aa13.23□□□□□ -0.29
TGFB3-204ENST00000556285 FIGNQ5HY92 759 aa13.23□□□□□ -0.29
TGFB3-204ENST00000556285 NCBP2-AS2Q69YL0 99 aa13.23□□□□□ -0.29
TGFB3-204ENST00000556285 USP45Q70EL2 814 aa13.23□□□□□ -0.29
TGFB3-204ENST00000556285 MARK2Q7KZI7 788 aaKnown RBP13.23□□□□□ -0.29
TGFB3-204ENST00000556285 BBS5Q8N3I7 341 aa13.23□□□□□ -0.29
TGFB3-204ENST00000556285 FAM71BQ8TC56 605 aa13.23□□□□□ -0.29
TGFB3-204ENST00000556285 NSMCE1Q8WV22 266 aa13.23□□□□□ -0.29
TGFB3-204ENST00000556285 SCARF2Q96GP6 870 aaPredicted RBP13.23□□□□□ -0.29
TGFB3-204ENST00000556285 CCDC74BQ96LY2 380 aa13.23□□□□□ -0.29
TGFB3-204ENST00000556285 CMKLR1Q99788 373 aa13.23□□□□□ -0.29
TGFB3-204ENST00000556285 TMEM9Q9P0T7 183 aa13.23□□□□□ -0.29
TGFB3-204ENST00000556285 IP6K2Q9UHH9 426 aa13.23□□□□□ -0.29
TGFB3-204ENST00000556285 CHKBQ9Y259 395 aa13.23□□□□□ -0.29
TGFB3-204ENST00000556285 A0A0J9YYE9 177 aa13.22□□□□□ -0.29
TGFB3-204ENST00000556285 CAPN8A6NHC0 703 aa13.22□□□□□ -0.29
TGFB3-204ENST00000556285 INPP4BO15327 924 aa13.22□□□□□ -0.29
TGFB3-204ENST00000556285 PRLP01236 227 aa13.22□□□□□ -0.29
TGFB3-204ENST00000556285 TRBC1P01850 177 aa13.22□□□□□ -0.29
TGFB3-204ENST00000556285 FGF3P11487 239 aaPredicted RBP13.22□□□□□ -0.29
TGFB3-204ENST00000556285 TEAD1P28347 426 aa13.22□□□□□ -0.29
TGFB3-204ENST00000556285 SERPINB6P35237 376 aa13.22□□□□□ -0.29
TGFB3-204ENST00000556285 GARSP41250 739 aaKnown RBP13.22□□□□□ -0.29
TGFB3-204ENST00000556285 ACTR1BP42025 376 aa13.22□□□□□ -0.29
TGFB3-204ENST00000556285 TAS2R40P59535 323 aa13.22□□□□□ -0.29
TGFB3-204ENST00000556285 ACTR1AP61163 376 aa13.22□□□□□ -0.29
TGFB3-204ENST00000556285 FANCCQ00597 558 aa13.22□□□□□ -0.29
TGFB3-204ENST00000556285 NIPAL4Q0D2K0 466 aa13.22□□□□□ -0.29
TGFB3-204ENST00000556285 GALNT2Q10471 571 aa13.22□□□□□ -0.29
TGFB3-204ENST00000556285 DPYSL3Q14195 570 aa13.22□□□□□ -0.29
TGFB3-204ENST00000556285 NFKBIBQ15653 356 aa13.22□□□□□ -0.29
TGFB3-204ENST00000556285 PYCR3Q53H96 274 aa13.22□□□□□ -0.29
TGFB3-204ENST00000556285 RALGPS1Q5JS13 557 aa13.22□□□□□ -0.29
TGFB3-204ENST00000556285 ADAMTSL4Q6UY14 1074 aa13.22□□□□□ -0.29
TGFB3-204ENST00000556285 PRICKLE2Q7Z3G6 844 aa13.22□□□□□ -0.29
TGFB3-204ENST00000556285 LUZP1Q86V48 1076 aa13.22□□□□□ -0.29
TGFB3-204ENST00000556285 ZNF761Q86XN6 746 aaPredicted RBP13.22□□□□□ -0.29
TGFB3-204ENST00000556285 DTX1Q86Y01 620 aa13.22□□□□□ -0.29
TGFB3-204ENST00000556285 ARRDC2Q8TBH0 407 aa13.22□□□□□ -0.29
TGFB3-204ENST00000556285 MAML1Q92585 1016 aa13.22□□□□□ -0.29
TGFB3-204ENST00000556285 TMEM159Q96B96 161 aa13.22□□□□□ -0.29
TGFB3-204ENST00000556285 AP2M1Q96CW1 435 aa13.22□□□□□ -0.29
TGFB3-204ENST00000556285 SGF29Q96ES7 293 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms