RNA–Protein interactions for RNA: ENST00000555569.1

PCNX4-209, Transcript of pecanex 4, humanhuman

TSL 3

Gene PCNX4, Length 515 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-209ENST00000555569 A0A1W2PQM1 296 aa13.76□□□□□ -0.21
PCNX4-209ENST00000555569 D6RAR5 112 aa13.76□□□□□ -0.21
PCNX4-209ENST00000555569 APOL1O14791 398 aa13.76□□□□□ -0.21
PCNX4-209ENST00000555569 SOD1P00441 154 aa13.76□□□□□ -0.21
PCNX4-209ENST00000555569 PYGLP06737 847 aa13.76□□□□□ -0.21
PCNX4-209ENST00000555569 IVLP07476 585 aa13.76□□□□□ -0.21
PCNX4-209ENST00000555569 PNLIPP16233 465 aa13.76□□□□□ -0.21
PCNX4-209ENST00000555569 ZFXP17010 805 aaPredicted RBP13.76□□□□□ -0.21
PCNX4-209ENST00000555569 CD86P42081 329 aa13.76□□□□□ -0.21
PCNX4-209ENST00000555569 SLC1A1P43005 524 aa13.76□□□□□ -0.21
PCNX4-209ENST00000555569 GNPDA1P46926 289 aa13.76□□□□□ -0.21
PCNX4-209ENST00000555569 ILF3Q12906 894 aaKnown RBP eCLIP13.76□□□□□ -0.21
PCNX4-209ENST00000555569 HLTFQ14527 1009 aaKnown RBP eCLIP13.76□□□□□ -0.21
PCNX4-209ENST00000555569 TCEAL1Q15170 157 aa13.76□□□□□ -0.21
PCNX4-209ENST00000555569 ODF2Q5BJF6 829 aa13.76□□□□□ -0.21
PCNX4-209ENST00000555569 FOXR1Q6PIV2 292 aa13.76□□□□□ -0.21
PCNX4-209ENST00000555569 DOK6Q6PKX4 331 aa13.76□□□□□ -0.21
PCNX4-209ENST00000555569 B3GNT8Q7Z7M8 397 aa13.76□□□□□ -0.21
PCNX4-209ENST00000555569 NLRP8Q86W28 1048 aa13.76□□□□□ -0.21
PCNX4-209ENST00000555569 NRROSQ86YC3 692 aa13.76□□□□□ -0.21
PCNX4-209ENST00000555569 RFX6Q8HWS3 928 aa13.76□□□□□ -0.21
PCNX4-209ENST00000555569 SFTPA2Q8IWL1 248 aa13.76□□□□□ -0.21
PCNX4-209ENST00000555569 SPACA3Q8IXA5 215 aa13.76□□□□□ -0.21
PCNX4-209ENST00000555569 NRSN1Q8IZ57 195 aa13.76□□□□□ -0.21
PCNX4-209ENST00000555569 Q8N9G6 341 aaPredicted RBP13.76□□□□□ -0.21
PCNX4-209ENST00000555569 PTCD2Q8WV60 388 aaKnown RBP13.76□□□□□ -0.21
PCNX4-209ENST00000555569 SCAMP4Q969E2 229 aa13.76□□□□□ -0.21
PCNX4-209ENST00000555569 LIN37Q96GY3 246 aaPredicted RBP13.76□□□□□ -0.21
PCNX4-209ENST00000555569 NAF1Q96HR8 494 aaKnown RBP13.76□□□□□ -0.21
PCNX4-209ENST00000555569 SLC46A1Q96NT5 459 aa13.76□□□□□ -0.21
PCNX4-209ENST00000555569 PRORYQ9H606 182 aa13.76□□□□□ -0.21
PCNX4-209ENST00000555569 DDX56Q9NY93 547 aaKnown RBP13.76□□□□□ -0.21
PCNX4-209ENST00000555569 APPL1Q9UKG1 709 aa13.76□□□□□ -0.21
PCNX4-209ENST00000555569 SLC17A4Q9Y2C5 497 aa13.76□□□□□ -0.21
PCNX4-209ENST00000555569 HYOU1Q9Y4L1 999 aa13.76□□□□□ -0.21
PCNX4-209ENST00000555569 RNF215Q9Y6U7 377 aa13.76□□□□□ -0.21
PCNX4-209ENST00000555569 SCN8AQ9UQD0 1980 aa13.76□□□□□ -0.21
PCNX4-209ENST00000555569 TMX2-CTNND1H3BSU7 103 aa13.75□□□□□ -0.21
PCNX4-209ENST00000555569 PPP1R12AO14974 1030 aaPredicted RBP13.75□□□□□ -0.21
PCNX4-209ENST00000555569 NUDT21O43809 227 aaKnown RBP13.75□□□□□ -0.21
PCNX4-209ENST00000555569 CLDN7O95471 211 aa13.75□□□□□ -0.21
PCNX4-209ENST00000555569 MMP2P08253 660 aa13.75□□□□□ -0.21
PCNX4-209ENST00000555569 TNNT1P13805 278 aa13.75□□□□□ -0.21
PCNX4-209ENST00000555569 AK4P27144 223 aaPredicted RBP13.75□□□□□ -0.21
PCNX4-209ENST00000555569 ADCY8P40145 1251 aa13.75□□□□□ -0.21
PCNX4-209ENST00000555569 MLLT3P42568 568 aaPredicted RBP13.75□□□□□ -0.21
PCNX4-209ENST00000555569 POLD2P49005 469 aa13.75□□□□□ -0.21
PCNX4-209ENST00000555569 INHBCP55103 352 aa13.75□□□□□ -0.21
PCNX4-209ENST00000555569 SKOR1P84550 965 aa13.75□□□□□ -0.21
PCNX4-209ENST00000555569 TLE3Q04726 772 aa13.75□□□□□ -0.21
PCNX4-209ENST00000555569 AP1B1Q10567 949 aa13.75□□□□□ -0.21
PCNX4-209ENST00000555569 ZBTB17Q13105 803 aa13.75□□□□□ -0.21
PCNX4-209ENST00000555569 PDK1Q15118 436 aa13.75□□□□□ -0.21
PCNX4-209ENST00000555569 QPCTQ16769 361 aa13.75□□□□□ -0.21
PCNX4-209ENST00000555569 SOWAHCQ53LP3 525 aaPredicted RBP13.75□□□□□ -0.21
PCNX4-209ENST00000555569 SARM1Q6SZW1 724 aa13.75□□□□□ -0.21
PCNX4-209ENST00000555569 NPNTQ6UXI9 565 aa13.75□□□□□ -0.21
PCNX4-209ENST00000555569 SPRED1Q7Z699 444 aa13.75□□□□□ -0.21
PCNX4-209ENST00000555569 RHOT1Q8IXI2 618 aa13.75□□□□□ -0.21
PCNX4-209ENST00000555569 RAVER1Q8IY67 606 aaKnown RBP13.75□□□□□ -0.21
PCNX4-209ENST00000555569 CNTD1Q8N815 330 aa13.75□□□□□ -0.21
PCNX4-209ENST00000555569 ZDHHC1Q8WTX9 485 aa13.75□□□□□ -0.21
PCNX4-209ENST00000555569 RNF25Q96BH1 459 aaPredicted RBP13.75□□□□□ -0.21
PCNX4-209ENST00000555569 SCARF2Q96GP6 870 aaPredicted RBP13.75□□□□□ -0.21
PCNX4-209ENST00000555569 TMEM74Q96NL1 305 aa13.75□□□□□ -0.21
PCNX4-209ENST00000555569 LYSMD1Q96S90 227 aa13.75□□□□□ -0.21
PCNX4-209ENST00000555569 RIOK2Q9BVS4 552 aaKnown RBP13.75□□□□□ -0.21
PCNX4-209ENST00000555569 TRIM5Q9C035 493 aa13.75□□□□□ -0.21
PCNX4-209ENST00000555569 STRADBQ9C0K7 418 aa13.75□□□□□ -0.21
PCNX4-209ENST00000555569 EPB41L5Q9HCM4 733 aa13.75□□□□□ -0.21
PCNX4-209ENST00000555569 SPATS2LQ9NUQ6 558 aaKnown RBP13.75□□□□□ -0.21
PCNX4-209ENST00000555569 TAAR2Q9P1P5 351 aa13.75□□□□□ -0.21
PCNX4-209ENST00000555569 LRIT1Q9P2V4 623 aa13.75□□□□□ -0.21
PCNX4-209ENST00000555569 AHCTF1Q8WYP5 2266 aa13.74□□□□□ -0.21
PCNX4-209ENST00000555569 C1orf232A0A0U1RR37 186 aa13.74□□□□□ -0.21
PCNX4-209ENST00000555569 PMS2P1A4D2B8 440 aa13.74□□□□□ -0.21
PCNX4-209ENST00000555569 CDRT15L2A8MXV6 281 aa13.74□□□□□ -0.21
PCNX4-209ENST00000555569 ANKRD66B4E2M5 251 aa13.74□□□□□ -0.21
PCNX4-209ENST00000555569 SPOPO43791 374 aa13.74□□□□□ -0.21
PCNX4-209ENST00000555569 FGF1P05230 155 aa13.74□□□□□ -0.21
PCNX4-209ENST00000555569 COMTP21964 271 aa13.74□□□□□ -0.21
PCNX4-209ENST00000555569 CCKBRP32239 447 aa13.74□□□□□ -0.21
PCNX4-209ENST00000555569 MAGEA1P43355 309 aa13.74□□□□□ -0.21
PCNX4-209ENST00000555569 MAZP56270 477 aaKnown RBP13.74□□□□□ -0.21
PCNX4-209ENST00000555569 CTBSQ01459 385 aa13.74□□□□□ -0.21
PCNX4-209ENST00000555569 EIF3IQ13347 325 aaKnown RBP13.74□□□□□ -0.21
PCNX4-209ENST00000555569 PEX6Q13608 980 aa13.74□□□□□ -0.21
PCNX4-209ENST00000555569 BROXQ5VW32 411 aa13.74□□□□□ -0.21
PCNX4-209ENST00000555569 SLC30A9Q6PML9 568 aa13.74□□□□□ -0.21
PCNX4-209ENST00000555569 MFSD7Q6UXD7 560 aa13.74□□□□□ -0.21
PCNX4-209ENST00000555569 TRIM74Q86UV6 250 aa13.74□□□□□ -0.21
PCNX4-209ENST00000555569 C17orf82Q86X59 251 aaPredicted RBP13.74□□□□□ -0.21
PCNX4-209ENST00000555569 ARL14Q8N4G2 192 aa13.74□□□□□ -0.21
PCNX4-209ENST00000555569 TC2NQ8N9U0 490 aa13.74□□□□□ -0.21
PCNX4-209ENST00000555569 KCNE4Q8WWG9 221 aa13.74□□□□□ -0.21
PCNX4-209ENST00000555569 OLFM3Q96PB7 478 aa13.74□□□□□ -0.21
PCNX4-209ENST00000555569 OR2M4Q96R27 311 aa13.74□□□□□ -0.21
PCNX4-209ENST00000555569 AGAP2Q99490 1192 aa13.74□□□□□ -0.21
PCNX4-209ENST00000555569 MLPHQ9BV36 600 aaPredicted RBP13.74□□□□□ -0.21
PCNX4-209ENST00000555569 ADGRE3Q9BY15 652 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms