RNA–Protein interactions for RNA: ENST00000554592.5

ATXN3-228, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-228ENST00000554592 ANP32EQ9BTT0 268 aa5.06□□□□□ -1.6
ATXN3-228ENST00000554592 SEMA4CQ9C0C4 833 aa5.06□□□□□ -1.6
ATXN3-228ENST00000554592 ZNF518BQ9C0D4 1074 aa5.06□□□□□ -1.6
ATXN3-228ENST00000554592 BTBD1Q9H0C5 482 aa5.06□□□□□ -1.6
ATXN3-228ENST00000554592 C6orf106Q9H6K1 298 aaPredicted RBP5.06□□□□□ -1.6
ATXN3-228ENST00000554592 INTS13Q9NVM9 706 aa5.06□□□□□ -1.6
ATXN3-228ENST00000554592 ELOVL2Q9NXB9 296 aa5.06□□□□□ -1.6
ATXN3-228ENST00000554592 RBAKQ9NYW8 714 aaPredicted RBP5.06□□□□□ -1.6
ATXN3-228ENST00000554592 IL17BQ9UHF5 180 aa5.06□□□□□ -1.6
ATXN3-228ENST00000554592 SIX4Q9UIU6 781 aa5.06□□□□□ -1.6
ATXN3-228ENST00000554592 CLCA2Q9UQC9 943 aa5.06□□□□□ -1.6
ATXN3-228ENST00000554592 ZNF510Q9Y2H8 683 aa5.06□□□□□ -1.6
ATXN3-228ENST00000554592 PCDHA3Q9Y5H8 950 aa5.06□□□□□ -1.6
ATXN3-228ENST00000554592 SLCO1B1Q9Y6L6 691 aa5.06□□□□□ -1.6
ATXN3-228ENST00000554592 ARID2Q68CP9 1835 aa5.06□□□□□ -1.6
ATXN3-228ENST00000554592 PLXNB3Q9ULL4 1909 aa5.05□□□□□ -1.6
ATXN3-228ENST00000554592 PTPRJQ12913 1337 aa5.05□□□□□ -1.6
ATXN3-228ENST00000554592 A0A088AWK7 358 aa5.05□□□□□ -1.6
ATXN3-228ENST00000554592 FAM92AA1XBS5 289 aa5.05□□□□□ -1.6
ATXN3-228ENST00000554592 VWA3AA6NCI4 1184 aa5.05□□□□□ -1.6
ATXN3-228ENST00000554592 A8MXQ7 604 aa5.05□□□□□ -1.6
ATXN3-228ENST00000554592 PYCARD-AS1I3L0S3 204 aa5.05□□□□□ -1.6
ATXN3-228ENST00000554592 CLDN5O00501 218 aa5.05□□□□□ -1.6
ATXN3-228ENST00000554592 TLR5O60602 858 aa5.05□□□□□ -1.6
ATXN3-228ENST00000554592 SEMA4FO95754 770 aa5.05□□□□□ -1.6
ATXN3-228ENST00000554592 TBX18O95935 607 aa5.05□□□□□ -1.6
ATXN3-228ENST00000554592 TNNC2P02585 160 aa5.05□□□□□ -1.6
ATXN3-228ENST00000554592 DDCP20711 480 aa5.05□□□□□ -1.6
ATXN3-228ENST00000554592 ABCB4P21439 1286 aa5.05□□□□□ -1.6
ATXN3-228ENST00000554592 ACRV1P26436 265 aa5.05□□□□□ -1.6
ATXN3-228ENST00000554592 ACSL1P33121 698 aa5.05□□□□□ -1.6
ATXN3-228ENST00000554592 DDIT3P35638 169 aa5.05□□□□□ -1.6
ATXN3-228ENST00000554592 CHKAP35790 457 aa5.05□□□□□ -1.6
ATXN3-228ENST00000554592 ACADVLP49748 655 aa5.05□□□□□ -1.6
ATXN3-228ENST00000554592 MFAP3P55082 362 aa5.05□□□□□ -1.6
ATXN3-228ENST00000554592 CLDN6P56747 220 aa5.05□□□□□ -1.6
ATXN3-228ENST00000554592 NKX6-1P78426 367 aaPredicted RBP5.05□□□□□ -1.6
ATXN3-228ENST00000554592 HMGN5P82970 282 aaKnown RBP5.05□□□□□ -1.6
ATXN3-228ENST00000554592 IL9RQ01113 521 aa5.05□□□□□ -1.6
ATXN3-228ENST00000554592 FOXE3Q13461 319 aa5.05□□□□□ -1.6
ATXN3-228ENST00000554592 LY6DQ14210 128 aa5.05□□□□□ -1.6
ATXN3-228ENST00000554592 ZNF234Q14588 700 aa5.05□□□□□ -1.6
ATXN3-228ENST00000554592 RILPL1Q5EBL4 403 aa5.05□□□□□ -1.6
ATXN3-228ENST00000554592 KCNT1Q5JUK3 1230 aa5.05□□□□□ -1.6
ATXN3-228ENST00000554592 COLEC12Q5KU26 742 aa5.05□□□□□ -1.6
ATXN3-228ENST00000554592 ZNF572Q7Z3I7 529 aaPredicted RBP5.05□□□□□ -1.6
ATXN3-228ENST00000554592 DAAM2Q86T65 1068 aa5.05□□□□□ -1.6
ATXN3-228ENST00000554592 ERICH1Q86X53 443 aa5.05□□□□□ -1.6
ATXN3-228ENST00000554592 GATAD2AQ86YP4 633 aa5.05□□□□□ -1.6
ATXN3-228ENST00000554592 DHX40Q8IX18 779 aaKnown RBP5.05□□□□□ -1.6
ATXN3-228ENST00000554592 EID2Q8N6I1 236 aa5.05□□□□□ -1.6
ATXN3-228ENST00000554592 DCBLD1Q8N8Z6 715 aa5.05□□□□□ -1.6
ATXN3-228ENST00000554592 OR5M3Q8NGP4 307 aa5.05□□□□□ -1.6
ATXN3-228ENST00000554592 SVIPQ8NHG7 77 aa5.05□□□□□ -1.6
ATXN3-228ENST00000554592 RAD54LQ92698 747 aa5.05□□□□□ -1.6
ATXN3-228ENST00000554592 SAAL1Q96ER3 474 aa5.05□□□□□ -1.6
ATXN3-228ENST00000554592 HIC2Q96JB3 615 aa5.05□□□□□ -1.6
ATXN3-228ENST00000554592 NT5C1BQ96P26 610 aa5.05□□□□□ -1.6
ATXN3-228ENST00000554592 KCNK16Q96T55 309 aa5.05□□□□□ -1.6
ATXN3-228ENST00000554592 STRA6Q9BX79 667 aa5.05□□□□□ -1.6
ATXN3-228ENST00000554592 DPH1Q9BZG8 443 aa5.05□□□□□ -1.6
ATXN3-228ENST00000554592 TRIM9Q9C026 710 aa5.05□□□□□ -1.6
ATXN3-228ENST00000554592 MTMR12Q9C0I1 747 aa5.05□□□□□ -1.6
ATXN3-228ENST00000554592 VPS11Q9H270 941 aa5.05□□□□□ -1.6
ATXN3-228ENST00000554592 LHX5Q9H2C1 402 aa5.05□□□□□ -1.6
ATXN3-228ENST00000554592 FBXO44Q9H4M3 255 aa5.05□□□□□ -1.6
ATXN3-228ENST00000554592 MRPL44Q9H9J2 332 aaKnown RBP5.05□□□□□ -1.6
ATXN3-228ENST00000554592 SGK2Q9HBY8 427 aa5.05□□□□□ -1.6
ATXN3-228ENST00000554592 PDE11AQ9HCR9 933 aa5.05□□□□□ -1.6
ATXN3-228ENST00000554592 TLR8Q9NR97 1041 aaKnown RBP5.05□□□□□ -1.6
ATXN3-228ENST00000554592 BLOC1S4Q9NUP1 217 aa5.05□□□□□ -1.6
ATXN3-228ENST00000554592 TMEM30AQ9NV96 361 aa5.05□□□□□ -1.6
ATXN3-228ENST00000554592 PLK2Q9NYY3 685 aa5.05□□□□□ -1.6
ATXN3-228ENST00000554592 USP25Q9UHP3 1055 aa5.05□□□□□ -1.6
ATXN3-228ENST00000554592 POLHQ9Y253 713 aa5.05□□□□□ -1.6
ATXN3-228ENST00000554592 ACTL7AQ9Y615 435 aa5.05□□□□□ -1.6
ATXN3-228ENST00000554592 ZNF462Q96JM2 2506 aa5.05□□□□□ -1.6
ATXN3-228ENST00000554592 KIF26AQ9ULI4 1882 aaPredicted RBP5.05□□□□□ -1.6
ATXN3-228ENST00000554592 NAV2Q8IVL1 2488 aa5.04□□□□□ -1.6
ATXN3-228ENST00000554592 KNTC1P50748 2209 aa5.04□□□□□ -1.6
ATXN3-228ENST00000554592 ATP8B3O60423 1300 aa5.04□□□□□ -1.6
ATXN3-228ENST00000554592 BPTFQ12830 3046 aa5.04□□□□□ -1.6
ATXN3-228ENST00000554592 A0A1W2PPC4 97 aa5.04□□□□□ -1.6
ATXN3-228ENST00000554592 UBE2QL1A1L167 161 aa5.04□□□□□ -1.6
ATXN3-228ENST00000554592 GOLGA8IPA6NC78 632 aa5.04□□□□□ -1.6
ATXN3-228ENST00000554592 ZNF233A6NK53 670 aa5.04□□□□□ -1.6
ATXN3-228ENST00000554592 GOLGA8JA6NMD2 632 aa5.04□□□□□ -1.6
ATXN3-228ENST00000554592 KIAA0391O15091 583 aaKnown RBP5.04□□□□□ -1.6
ATXN3-228ENST00000554592 KLK10O43240 276 aa5.04□□□□□ -1.6
ATXN3-228ENST00000554592 MT-CO3P00414 261 aa5.04□□□□□ -1.6
ATXN3-228ENST00000554592 PENKP01210 267 aaPredicted RBP5.04□□□□□ -1.6
ATXN3-228ENST00000554592 ALOX15P16050 662 aaPredicted RBP5.04□□□□□ -1.6
ATXN3-228ENST00000554592 CKMT2P17540 419 aa5.04□□□□□ -1.6
ATXN3-228ENST00000554592 GAP43P17677 238 aa5.04□□□□□ -1.6
ATXN3-228ENST00000554592 MALP21145 153 aa5.04□□□□□ -1.6
ATXN3-228ENST00000554592 PRKCHP24723 683 aa5.04□□□□□ -1.6
ATXN3-228ENST00000554592 PI4KAP42356 2102 aa5.04□□□□□ -1.6
ATXN3-228ENST00000554592 RXRGP48443 463 aa5.04□□□□□ -1.6
ATXN3-228ENST00000554592 ARRB1P49407 418 aaPredicted RBP5.04□□□□□ -1.6
ATXN3-228ENST00000554592 NEK3P51956 506 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms