RNA–Protein interactions for RNA: ENST00000554064.5

FCF1-205, Transcript of FCF1, rRNA-processing protein, humanhuman

TSL 4

Gene FCF1, Length 605 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FCF1-205ENST00000554064 CCDC6Q16204 474 aa3.57□□□□□ -1.84
FCF1-205ENST00000554064 PDSS1Q5T2R2 415 aa3.57□□□□□ -1.84
FCF1-205ENST00000554064 QSOX2Q6ZRP7 698 aa3.57□□□□□ -1.84
FCF1-205ENST00000554064 PABPC5Q96DU9 382 aaKnown RBP3.57□□□□□ -1.84
FCF1-205ENST00000554064 MMP25Q9NPA2 562 aa3.57□□□□□ -1.84
FCF1-205ENST00000554064 TMEM160Q9NX00 188 aa3.57□□□□□ -1.84
FCF1-205ENST00000554064 DDX43Q9NXZ2 648 aaKnown RBP3.57□□□□□ -1.84
FCF1-205ENST00000554064 SLC25A10Q9UBX3 287 aaPredicted RBP3.57□□□□□ -1.84
FCF1-205ENST00000554064 OR2W1Q9Y3N9 320 aa3.57□□□□□ -1.84
FCF1-205ENST00000554064 SCINQ9Y6U3 715 aa3.57□□□□□ -1.84
FCF1-205ENST00000554064 EEA1Q15075 1411 aa3.56□□□□□ -1.84
FCF1-205ENST00000554064 LILRA5A6NI73 299 aa3.56□□□□□ -1.84
FCF1-205ENST00000554064 TSPAN4O14817 238 aa3.56□□□□□ -1.84
FCF1-205ENST00000554064 WDR1O75083 606 aa3.56□□□□□ -1.84
FCF1-205ENST00000554064 HNRNPA1P09651 372 aaKnown RBP eCLIP3.56□□□□□ -1.84
FCF1-205ENST00000554064 CNTFP26441 200 aa3.56□□□□□ -1.84
FCF1-205ENST00000554064 GABRB2P47870 512 aa3.56□□□□□ -1.84
FCF1-205ENST00000554064 GNAQP50148 359 aa3.56□□□□□ -1.84
FCF1-205ENST00000554064 RPP30P78346 268 aaKnown RBP3.56□□□□□ -1.84
FCF1-205ENST00000554064 SREBF2Q12772 1141 aa3.56□□□□□ -1.84
FCF1-205ENST00000554064 GPR68Q15743 365 aa3.56□□□□□ -1.84
FCF1-205ENST00000554064 DUS1LQ6P1R4 473 aaKnown RBP3.56□□□□□ -1.84
FCF1-205ENST00000554064 ZNF852Q6ZMS4 543 aa3.56□□□□□ -1.84
FCF1-205ENST00000554064 WDSUB1Q8N9V3 476 aa3.56□□□□□ -1.84
FCF1-205ENST00000554064 ZCCHC10Q8TBK6 192 aa3.56□□□□□ -1.84
FCF1-205ENST00000554064 GCC1Q96CN9 775 aa3.56□□□□□ -1.84
FCF1-205ENST00000554064 KLHL29Q96CT2 875 aa3.56□□□□□ -1.84
FCF1-205ENST00000554064 ZNF501Q96CX3 271 aaPredicted RBP3.56□□□□□ -1.84
FCF1-205ENST00000554064 ORAI1Q96D31 301 aa3.56□□□□□ -1.84
FCF1-205ENST00000554064 ZBTB10Q96DT7 871 aa3.56□□□□□ -1.84
FCF1-205ENST00000554064 PCYT2Q99447 389 aa3.56□□□□□ -1.84
FCF1-205ENST00000554064 SYT17Q9BSW7 474 aa3.56□□□□□ -1.84
FCF1-205ENST00000554064 FUZQ9BT04 418 aa3.56□□□□□ -1.84
FCF1-205ENST00000554064 LRRC1Q9BTT6 524 aa3.56□□□□□ -1.84
FCF1-205ENST00000554064 IFIH1Q9BYX4 1025 aaKnown RBP3.56□□□□□ -1.84
FCF1-205ENST00000554064 PLEKHA4Q9H4M7 779 aa3.56□□□□□ -1.84
FCF1-205ENST00000554064 ZNF696Q9H7X3 374 aa3.56□□□□□ -1.84
FCF1-205ENST00000554064 FKRPQ9H9S5 495 aa3.56□□□□□ -1.84
FCF1-205ENST00000554064 GREB1LQ9C091 1923 aaPredicted RBP3.56□□□□□ -1.84
FCF1-205ENST00000554064 TTC36A6NLP5 189 aa3.55□□□□□ -1.84
FCF1-205ENST00000554064 SNAP23O00161 211 aa3.55□□□□□ -1.84
FCF1-205ENST00000554064 FTCDO95954 541 aa3.55□□□□□ -1.84
FCF1-205ENST00000554064 EGFP01133 1207 aa3.55□□□□□ -1.84
FCF1-205ENST00000554064 TERF1P54274 439 aa3.55□□□□□ -1.84
FCF1-205ENST00000554064 ERVK11-1P61568 191 aa3.55□□□□□ -1.84
FCF1-205ENST00000554064 GALNT2Q10471 571 aa3.55□□□□□ -1.84
FCF1-205ENST00000554064 CAMK1Q14012 370 aa3.55□□□□□ -1.84
FCF1-205ENST00000554064 SLC9B1Q4ZJI4 515 aa3.55□□□□□ -1.84
FCF1-205ENST00000554064 SIRPB2Q5JXA9 342 aa3.55□□□□□ -1.84
FCF1-205ENST00000554064 NAA35Q5VZE5 725 aa3.55□□□□□ -1.84
FCF1-205ENST00000554064 ASB18Q6ZVZ8 466 aa3.55□□□□□ -1.84
FCF1-205ENST00000554064 HAPLN4Q86UW8 402 aa3.55□□□□□ -1.84
FCF1-205ENST00000554064 PCDH20Q8N6Y1 951 aaKnown RBP3.55□□□□□ -1.84
FCF1-205ENST00000554064 CNBD1Q8NA66 436 aa3.55□□□□□ -1.84
FCF1-205ENST00000554064 SLC41A2Q96JW4 573 aa3.55□□□□□ -1.84
FCF1-205ENST00000554064 MAELQ96JY0 434 aaKnown RBP3.55□□□□□ -1.84
FCF1-205ENST00000554064 FAM110AQ9BQ89 295 aa3.55□□□□□ -1.84
FCF1-205ENST00000554064 POLR3CQ9BUI4 534 aaPredicted RBP3.55□□□□□ -1.84
FCF1-205ENST00000554064 GLIS2Q9BZE0 524 aaPredicted RBP3.55□□□□□ -1.84
FCF1-205ENST00000554064 VEZTQ9HBM0 779 aa3.55□□□□□ -1.84
FCF1-205ENST00000554064 MPP6Q9NZW5 540 aa3.55□□□□□ -1.84
FCF1-205ENST00000554064 AAR2Q9Y312 384 aaKnown RBP3.55□□□□□ -1.84
FCF1-205ENST00000554064 TAF1P21675 1872 aa3.55□□□□□ -1.84
FCF1-205ENST00000554064 TAF4O00268 1085 aa3.54□□□□□ -1.84
FCF1-205ENST00000554064 LDLRAD4O15165 306 aa3.54□□□□□ -1.84
FCF1-205ENST00000554064 LDLRP01130 860 aa3.54□□□□□ -1.84
FCF1-205ENST00000554064 POLR2CP19387 275 aaPredicted RBP3.54□□□□□ -1.84
FCF1-205ENST00000554064 CSNK2A1P68400 391 aaPredicted RBP3.54□□□□□ -1.84
FCF1-205ENST00000554064 FOXM1Q08050 763 aa3.54□□□□□ -1.84
FCF1-205ENST00000554064 TRPC3Q13507 836 aa3.54□□□□□ -1.84
FCF1-205ENST00000554064 GTF2H2Q13888 395 aa3.54□□□□□ -1.84
FCF1-205ENST00000554064 PLEKHA7Q6IQ23 1121 aa3.54□□□□□ -1.84
FCF1-205ENST00000554064 ZNF280DQ6N043 979 aa3.54□□□□□ -1.84
FCF1-205ENST00000554064 TTI2Q6NXR4 508 aa3.54□□□□□ -1.84
FCF1-205ENST00000554064 GTF2H2CQ6P1K8 395 aa3.54□□□□□ -1.84
FCF1-205ENST00000554064 PQLC2Q6ZP29 291 aa3.54□□□□□ -1.84
FCF1-205ENST00000554064 SLC46A3Q7Z3Q1 461 aa3.54□□□□□ -1.84
FCF1-205ENST00000554064 CSNK2A3Q8NEV1 391 aa3.54□□□□□ -1.84
FCF1-205ENST00000554064 CTCFLQ8NI51 663 aaPredicted RBP3.54□□□□□ -1.84
FCF1-205ENST00000554064 HMGCLL1Q8TB92 370 aa3.54□□□□□ -1.84
FCF1-205ENST00000554064 PIGTQ969N2 578 aa3.54□□□□□ -1.84
FCF1-205ENST00000554064 APOPT1Q96IL0 206 aa3.54□□□□□ -1.84
FCF1-205ENST00000554064 UBXN10Q96LJ8 280 aa3.54□□□□□ -1.84
FCF1-205ENST00000554064 ZNF354BQ96LW1 612 aa3.54□□□□□ -1.84
FCF1-205ENST00000554064 SCLT1Q96NL6 688 aa3.54□□□□□ -1.84
FCF1-205ENST00000554064 QRFPRQ96P65 431 aa3.54□□□□□ -1.84
FCF1-205ENST00000554064 EIF2AK1Q9BQI3 630 aaKnown RBP3.54□□□□□ -1.84
FCF1-205ENST00000554064 FAM118AQ9NWS6 357 aa3.54□□□□□ -1.84
FCF1-205ENST00000554064 HCFC1R1Q9NWW0 138 aa3.54□□□□□ -1.84
FCF1-205ENST00000554064 PPP1R14DQ9NXH3 145 aa3.54□□□□□ -1.84
FCF1-205ENST00000554064 TBX20Q9UMR3 447 aa3.54□□□□□ -1.84
FCF1-205ENST00000554064 DLGAP4Q9Y2H0 992 aa3.54□□□□□ -1.84
FCF1-205ENST00000554064 CC2D2AQ9P2K1 1620 aa3.54□□□□□ -1.84
FCF1-205ENST00000554064 SOGA1O94964 1423 aa3.53□□□□□ -1.84
FCF1-205ENST00000554064 PTPRCP08575 1304 aa3.53□□□□□ -1.84
FCF1-205ENST00000554064 ANTXRLA6NF34 631 aa3.53□□□□□ -1.84
FCF1-205ENST00000554064 PMS2P5A8MQ11 134 aa3.53□□□□□ -1.84
FCF1-205ENST00000554064 USP17L23D6RBM5 183 aa3.53□□□□□ -1.84
FCF1-205ENST00000554064 IFRD1O00458 451 aaPredicted RBP3.53□□□□□ -1.84
FCF1-205ENST00000554064 VCYO14598 125 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms