RNA–Protein interactions for RNA: ENST00000553693.5

SCFD1-210, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-210ENST00000553693 FAM118AQ9NWS6 357 aa3.88□□□□□ -1.79
SCFD1-210ENST00000553693 MPP6Q9NZW5 540 aa3.88□□□□□ -1.79
SCFD1-210ENST00000553693 A4GNTQ9UNA3 340 aa3.88□□□□□ -1.79
SCFD1-210ENST00000553693 LOXL2Q9Y4K0 774 aa3.88□□□□□ -1.79
SCFD1-210ENST00000553693 UTYO14607 1347 aa3.88□□□□□ -1.79
SCFD1-210ENST00000553693 URB2Q14146 1524 aaKnown RBP3.87□□□□□ -1.79
SCFD1-210ENST00000553693 ZNF608Q9ULD9 1512 aaPredicted RBP3.87□□□□□ -1.79
SCFD1-210ENST00000553693 TNPO2O14787 897 aaKnown RBP3.87□□□□□ -1.79
SCFD1-210ENST00000553693 TSPAN4O14817 238 aa3.87□□□□□ -1.79
SCFD1-210ENST00000553693 SEC14L5O43304 696 aa3.87□□□□□ -1.79
SCFD1-210ENST00000553693 PIP5K1CO60331 668 aa3.87□□□□□ -1.79
SCFD1-210ENST00000553693 ZG16O60844 167 aa3.87□□□□□ -1.79
SCFD1-210ENST00000553693 ATP12AP54707 1039 aa3.87□□□□□ -1.79
SCFD1-210ENST00000553693 UFM1P61960 85 aa3.87□□□□□ -1.79
SCFD1-210ENST00000553693 VAMP2P63027 116 aa3.87□□□□□ -1.79
SCFD1-210ENST00000553693 SORDQ00796 357 aa3.87□□□□□ -1.79
SCFD1-210ENST00000553693 TLE2Q04725 743 aa3.87□□□□□ -1.79
SCFD1-210ENST00000553693 CCNYL2Q5T2Q4 361 aa3.87□□□□□ -1.79
SCFD1-210ENST00000553693 PDSS1Q5T2R2 415 aa3.87□□□□□ -1.79
SCFD1-210ENST00000553693 GPATCH4Q5T3I0 446 aaKnown RBP3.87□□□□□ -1.79
SCFD1-210ENST00000553693 KCTD8Q6ZWB6 473 aa3.87□□□□□ -1.79
SCFD1-210ENST00000553693 SLC24A4Q8NFF2 622 aa3.87□□□□□ -1.79
SCFD1-210ENST00000553693 OR2AK2Q8NG84 335 aa3.87□□□□□ -1.79
SCFD1-210ENST00000553693 GCC1Q96CN9 775 aa3.87□□□□□ -1.79
SCFD1-210ENST00000553693 KLHL29Q96CT2 875 aa3.87□□□□□ -1.79
SCFD1-210ENST00000553693 FAM110AQ9BQ89 295 aa3.87□□□□□ -1.79
SCFD1-210ENST00000553693 SYT17Q9BSW7 474 aa3.87□□□□□ -1.79
SCFD1-210ENST00000553693 FUZQ9BT04 418 aa3.87□□□□□ -1.79
SCFD1-210ENST00000553693 PLEKHA4Q9H4M7 779 aa3.87□□□□□ -1.79
SCFD1-210ENST00000553693 MMP25Q9NPA2 562 aa3.87□□□□□ -1.79
SCFD1-210ENST00000553693 TMEM160Q9NX00 188 aa3.87□□□□□ -1.79
SCFD1-210ENST00000553693 TAF1P21675 1872 aa3.87□□□□□ -1.79
SCFD1-210ENST00000553693 ARAP1Q96P48 1450 aa3.86□□□□□ -1.79
SCFD1-210ENST00000553693 WDR1O75083 606 aa3.86□□□□□ -1.79
SCFD1-210ENST00000553693 APOHP02749 345 aaPredicted RBP3.86□□□□□ -1.79
SCFD1-210ENST00000553693 DDIT3P35638 169 aa3.86□□□□□ -1.79
SCFD1-210ENST00000553693 FASLGP48023 281 aa3.86□□□□□ -1.79
SCFD1-210ENST00000553693 ERVK11-1P61568 191 aa3.86□□□□□ -1.79
SCFD1-210ENST00000553693 CSNK2A1P68400 391 aaPredicted RBP3.86□□□□□ -1.79
SCFD1-210ENST00000553693 NAE1Q13564 534 aa3.86□□□□□ -1.79
SCFD1-210ENST00000553693 ZNF234Q14588 700 aa3.86□□□□□ -1.79
SCFD1-210ENST00000553693 GPR68Q15743 365 aa3.86□□□□□ -1.79
SCFD1-210ENST00000553693 C2orf68Q2NKX9 166 aa3.86□□□□□ -1.79
SCFD1-210ENST00000553693 FRG2Q64ET8 278 aa3.86□□□□□ -1.79
SCFD1-210ENST00000553693 TTI2Q6NXR4 508 aa3.86□□□□□ -1.79
SCFD1-210ENST00000553693 EPHX4Q8IUS5 362 aa3.86□□□□□ -1.79
SCFD1-210ENST00000553693 ZNF34Q8IZ26 560 aa3.86□□□□□ -1.79
SCFD1-210ENST00000553693 ANKRD42Q8N9B4 389 aa3.86□□□□□ -1.79
SCFD1-210ENST00000553693 CSNK2A3Q8NEV1 391 aa3.86□□□□□ -1.79
SCFD1-210ENST00000553693 KIF1BPQ96EK5 621 aa3.86□□□□□ -1.79
SCFD1-210ENST00000553693 SLC41A2Q96JW4 573 aa3.86□□□□□ -1.79
SCFD1-210ENST00000553693 KLHL15Q96M94 604 aa3.86□□□□□ -1.79
SCFD1-210ENST00000553693 PSMD1Q99460 953 aa3.86□□□□□ -1.79
SCFD1-210ENST00000553693 MTERF1Q99551 399 aaKnown RBP3.86□□□□□ -1.79
SCFD1-210ENST00000553693 CMKLR1Q99788 373 aa3.86□□□□□ -1.79
SCFD1-210ENST00000553693 KCNN2Q9H2S1 579 aa3.86□□□□□ -1.79
SCFD1-210ENST00000553693 SCRT2Q9NQ03 307 aa3.86□□□□□ -1.79
SCFD1-210ENST00000553693 NOL12Q9UGY1 213 aaKnown RBP eCLIP3.86□□□□□ -1.79
SCFD1-210ENST00000553693 TBX20Q9UMR3 447 aa3.86□□□□□ -1.79
SCFD1-210ENST00000553693 DLGAP4Q9Y2H0 992 aa3.86□□□□□ -1.79
SCFD1-210ENST00000553693 SCINQ9Y6U3 715 aa3.86□□□□□ -1.79
SCFD1-210ENST00000553693 CCDC196A0A1B0GTZ2 297 aa3.85□□□□□ -1.79
SCFD1-210ENST00000553693 USP17L23D6RBM5 183 aa3.85□□□□□ -1.79
SCFD1-210ENST00000553693 IFRD1O00458 451 aaPredicted RBP3.85□□□□□ -1.79
SCFD1-210ENST00000553693 MYOD1P15172 320 aa3.85□□□□□ -1.79
SCFD1-210ENST00000553693 CORO1AP31146 461 aaKnown RBP3.85□□□□□ -1.79
SCFD1-210ENST00000553693 RPP30P78346 268 aaKnown RBP3.85□□□□□ -1.79
SCFD1-210ENST00000553693 PMP22Q01453 160 aa3.85□□□□□ -1.79
SCFD1-210ENST00000553693 FOXM1Q08050 763 aa3.85□□□□□ -1.79
SCFD1-210ENST00000553693 SREBF2Q12772 1141 aa3.85□□□□□ -1.79
SCFD1-210ENST00000553693 GAGE5Q13069 117 aa3.85□□□□□ -1.79
SCFD1-210ENST00000553693 GAGE6Q13070 117 aa3.85□□□□□ -1.79
SCFD1-210ENST00000553693 GTF2H2Q13888 395 aa3.85□□□□□ -1.79
SCFD1-210ENST00000553693 GTF2H2CQ6P1K8 395 aa3.85□□□□□ -1.79
SCFD1-210ENST00000553693 ZNF852Q6ZMS4 543 aa3.85□□□□□ -1.79
SCFD1-210ENST00000553693 ASB18Q6ZVZ8 466 aa3.85□□□□□ -1.79
SCFD1-210ENST00000553693 SLC46A3Q7Z3Q1 461 aa3.85□□□□□ -1.79
SCFD1-210ENST00000553693 PCDH20Q8N6Y1 951 aaKnown RBP3.85□□□□□ -1.79
SCFD1-210ENST00000553693 ZNF501Q96CX3 271 aaPredicted RBP3.85□□□□□ -1.79
SCFD1-210ENST00000553693 QRFPRQ96P65 431 aa3.85□□□□□ -1.79
SCFD1-210ENST00000553693 NEURL2Q9BR09 285 aa3.85□□□□□ -1.79
SCFD1-210ENST00000553693 RBM4Q9BWF3 364 aaKnown RBP3.85□□□□□ -1.79
SCFD1-210ENST00000553693 ZNF696Q9H7X3 374 aa3.85□□□□□ -1.79
SCFD1-210ENST00000553693 HCFC1R1Q9NWW0 138 aa3.85□□□□□ -1.79
SCFD1-210ENST00000553693 FAF1Q9UNN5 650 aaPredicted RBP3.85□□□□□ -1.79
SCFD1-210ENST00000553693 AAR2Q9Y312 384 aaKnown RBP3.85□□□□□ -1.79
SCFD1-210ENST00000553693 AMBPP02760 352 aa3.84□□□□□ -1.79
SCFD1-210ENST00000553693 PAX1P15863 534 aa3.84□□□□□ -1.79
SCFD1-210ENST00000553693 CDAP32320 146 aa3.84□□□□□ -1.79
SCFD1-210ENST00000553693 GGT5P36269 586 aa3.84□□□□□ -1.79
SCFD1-210ENST00000553693 CCT5P48643 541 aa3.84□□□□□ -1.79
SCFD1-210ENST00000553693 GNAQP50148 359 aa3.84□□□□□ -1.79
SCFD1-210ENST00000553693 MMP14P50281 582 aa3.84□□□□□ -1.79
SCFD1-210ENST00000553693 TRPC3Q13507 836 aa3.84□□□□□ -1.79
SCFD1-210ENST00000553693 SIRPB2Q5JXA9 342 aa3.84□□□□□ -1.79
SCFD1-210ENST00000553693 C6orf141Q5SZD1 244 aa3.84□□□□□ -1.79
SCFD1-210ENST00000553693 DUS1LQ6P1R4 473 aaKnown RBP3.84□□□□□ -1.79
SCFD1-210ENST00000553693 PQLC2Q6ZP29 291 aa3.84□□□□□ -1.79
SCFD1-210ENST00000553693 QSOX2Q6ZRP7 698 aa3.84□□□□□ -1.79
SCFD1-210ENST00000553693 FAM76AQ8TAV0 307 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms