RNA–Protein interactions for RNA: ENST00000553039.1

CKAP4-203, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 4

Gene CKAP4, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-203ENST00000553039 ZNHIT2Q9UHR6 403 aa5.18□□□□□ -1.58
CKAP4-203ENST00000553039 ADAM30Q9UKF2 790 aa5.18□□□□□ -1.58
CKAP4-203ENST00000553039 PNMA8BQ9ULN7 279 aaPredicted RBP5.18□□□□□ -1.58
CKAP4-203ENST00000553039 EDARQ9UNE0 448 aa5.18□□□□□ -1.58
CKAP4-203ENST00000553039 SPEF1Q9Y4P9 236 aa5.18□□□□□ -1.58
CKAP4-203ENST00000553039 SHANK1Q9Y566 2161 aa5.17□□□□□ -1.58
CKAP4-203ENST00000553039 IGHV1OR21-1A0A087WYE8 117 aa5.17□□□□□ -1.58
CKAP4-203ENST00000553039 ARGFXA6NJG6 315 aa5.17□□□□□ -1.58
CKAP4-203ENST00000553039 KCNU1A8MYU2 1149 aa5.17□□□□□ -1.58
CKAP4-203ENST00000553039 FANCGO15287 622 aa5.17□□□□□ -1.58
CKAP4-203ENST00000553039 KCNN4O15554 427 aa5.17□□□□□ -1.58
CKAP4-203ENST00000553039 GPR39O43194 453 aa5.17□□□□□ -1.58
CKAP4-203ENST00000553039 SART1O43290 800 aaKnown RBP5.17□□□□□ -1.58
CKAP4-203ENST00000553039 DNAJA2O60884 412 aa5.17□□□□□ -1.58
CKAP4-203ENST00000553039 IPO13O94829 963 aaKnown RBP5.17□□□□□ -1.58
CKAP4-203ENST00000553039 FBXO21O94952 628 aa5.17□□□□□ -1.58
CKAP4-203ENST00000553039 POP4O95707 220 aaKnown RBP5.17□□□□□ -1.58
CKAP4-203ENST00000553039 MT-CO1P00395 513 aa5.17□□□□□ -1.58
CKAP4-203ENST00000553039 LTFP02788 710 aa5.17□□□□□ -1.58
CKAP4-203ENST00000553039 FGF1P05230 155 aa5.17□□□□□ -1.58
CKAP4-203ENST00000553039 STSP08842 583 aa5.17□□□□□ -1.58
CKAP4-203ENST00000553039 HOXC4P09017 264 aaPredicted RBP5.17□□□□□ -1.58
CKAP4-203ENST00000553039 LCP1P13796 627 aa5.17□□□□□ -1.58
CKAP4-203ENST00000553039 CD58P19256 250 aa5.17□□□□□ -1.58
CKAP4-203ENST00000553039 KLK2P20151 261 aa5.17□□□□□ -1.58
CKAP4-203ENST00000553039 LPOP22079 712 aaPredicted RBP5.17□□□□□ -1.58
CKAP4-203ENST00000553039 XPAP23025 273 aaPredicted RBP5.17□□□□□ -1.58
CKAP4-203ENST00000553039 PTPN4P29074 926 aa5.17□□□□□ -1.58
CKAP4-203ENST00000553039 IGFALSP35858 605 aa5.17□□□□□ -1.58
CKAP4-203ENST00000553039 ASPAP45381 313 aa5.17□□□□□ -1.58
CKAP4-203ENST00000553039 SUOXP51687 545 aa5.17□□□□□ -1.58
CKAP4-203ENST00000553039 DAOAP59103 153 aa5.17□□□□□ -1.58
CKAP4-203ENST00000553039 TLE4Q04727 773 aa5.17□□□□□ -1.58
CKAP4-203ENST00000553039 RAD51Q06609 339 aa5.17□□□□□ -1.58
CKAP4-203ENST00000553039 LTBQ06643 244 aa5.17□□□□□ -1.58
CKAP4-203ENST00000553039 ADIGQ0VDE8 80 aa5.17□□□□□ -1.58
CKAP4-203ENST00000553039 BST2Q10589 180 aaKnown RBP5.17□□□□□ -1.58
CKAP4-203ENST00000553039 ILF3Q12906 894 aaKnown RBP eCLIP5.17□□□□□ -1.58
CKAP4-203ENST00000553039 DNASE1L3Q13609 305 aa5.17□□□□□ -1.58
CKAP4-203ENST00000553039 ZNF800Q2TB10 664 aaPredicted RBP eCLIP5.17□□□□□ -1.58
CKAP4-203ENST00000553039 KLHL40Q2TBA0 621 aa5.17□□□□□ -1.58
CKAP4-203ENST00000553039 SKOR2Q2VWA4 1001 aaPredicted RBP5.17□□□□□ -1.58
CKAP4-203ENST00000553039 ZACNQ401N2 412 aa5.17□□□□□ -1.58
CKAP4-203ENST00000553039 ZC3H12AQ5D1E8 599 aaKnown RBP5.17□□□□□ -1.58
CKAP4-203ENST00000553039 FAM209AQ5JX71 171 aa5.17□□□□□ -1.58
CKAP4-203ENST00000553039 WIPI1Q5MNZ9 446 aaPredicted RBP5.17□□□□□ -1.58
CKAP4-203ENST00000553039 MCTP1Q6DN14 999 aa5.17□□□□□ -1.58
CKAP4-203ENST00000553039 FCRL6Q6DN72 434 aa5.17□□□□□ -1.58
CKAP4-203ENST00000553039 LINGO4Q6UY18 593 aa5.17□□□□□ -1.58
CKAP4-203ENST00000553039 RPTNQ6XPR3 784 aa5.17□□□□□ -1.58
CKAP4-203ENST00000553039 CCDC73Q6ZRK6 1079 aa5.17□□□□□ -1.58
CKAP4-203ENST00000553039 MED25Q71SY5 747 aa5.17□□□□□ -1.58
CKAP4-203ENST00000553039 PARS2Q7L3T8 475 aaKnown RBP5.17□□□□□ -1.58
CKAP4-203ENST00000553039 CXXC5Q7LFL8 322 aaKnown RBP5.17□□□□□ -1.58
CKAP4-203ENST00000553039 HDXQ7Z353 690 aa5.17□□□□□ -1.58
CKAP4-203ENST00000553039 STRA8Q7Z7C7 330 aa5.17□□□□□ -1.58
CKAP4-203ENST00000553039 SYVN1Q86TM6 617 aa5.17□□□□□ -1.58
CKAP4-203ENST00000553039 TMEM135Q86UB9 458 aa5.17□□□□□ -1.58
CKAP4-203ENST00000553039 KCNMB4Q86W47 210 aa5.17□□□□□ -1.58
CKAP4-203ENST00000553039 SKAP1Q86WV1 359 aa5.17□□□□□ -1.58
CKAP4-203ENST00000553039 RASGRP3Q8IV61 690 aa5.17□□□□□ -1.58
CKAP4-203ENST00000553039 RYBPQ8N488 228 aaPredicted RBP5.17□□□□□ -1.58
CKAP4-203ENST00000553039 ARFGAP1Q8N6T3 406 aa5.17□□□□□ -1.58
CKAP4-203ENST00000553039 PCDH20Q8N6Y1 951 aaKnown RBP5.17□□□□□ -1.58
CKAP4-203ENST00000553039 CHST14Q8NCH0 376 aa5.17□□□□□ -1.58
CKAP4-203ENST00000553039 GALNT6Q8NCL4 622 aa5.17□□□□□ -1.58
CKAP4-203ENST00000553039 LRRN4CLQ8ND94 238 aa5.17□□□□□ -1.58
CKAP4-203ENST00000553039 OR56A4Q8NGH8 313 aa5.17□□□□□ -1.58
CKAP4-203ENST00000553039 GOLGA5Q8TBA6 731 aa5.17□□□□□ -1.58
CKAP4-203ENST00000553039 COG1Q8WTW3 980 aa5.17□□□□□ -1.58
CKAP4-203ENST00000553039 SH3KBP1Q96B97 665 aa5.17□□□□□ -1.58
CKAP4-203ENST00000553039 FCRL2Q96LA5 508 aaPredicted RBP5.17□□□□□ -1.58
CKAP4-203ENST00000553039 RPRD1AQ96P16 312 aaPredicted RBP5.17□□□□□ -1.58
CKAP4-203ENST00000553039 TWNKQ96RR1 684 aa5.17□□□□□ -1.58
CKAP4-203ENST00000553039 SLC38A3Q99624 504 aa5.17□□□□□ -1.58
CKAP4-203ENST00000553039 SMAD5Q99717 465 aaKnown RBP5.17□□□□□ -1.58
CKAP4-203ENST00000553039 AARSD1Q9BTE6 412 aaKnown RBP5.17□□□□□ -1.58
CKAP4-203ENST00000553039 TRIM8Q9BZR9 551 aa5.17□□□□□ -1.58
CKAP4-203ENST00000553039 TRIM39Q9HCM9 518 aa5.17□□□□□ -1.58
CKAP4-203ENST00000553039 MBNL1Q9NR56 388 aaKnown RBP5.17□□□□□ -1.58
CKAP4-203ENST00000553039 ZIM2Q9NZV7 527 aa5.17□□□□□ -1.58
CKAP4-203ENST00000553039 RCOR3Q9P2K3 495 aaPredicted RBP5.17□□□□□ -1.58
CKAP4-203ENST00000553039 HECAQ9UBI9 543 aaPredicted RBP5.17□□□□□ -1.58
CKAP4-203ENST00000553039 MOSPD1Q9UJG1 213 aa5.17□□□□□ -1.58
CKAP4-203ENST00000553039 PCDHB10Q9UN67 800 aa5.17□□□□□ -1.58
CKAP4-203ENST00000553039 TBC1D30Q9Y2I9 924 aa5.17□□□□□ -1.58
CKAP4-203ENST00000553039 CORINQ9Y5Q5 1042 aa5.17□□□□□ -1.58
CKAP4-203ENST00000553039 TRPM6Q9BX84 2022 aa5.17□□□□□ -1.58
CKAP4-203ENST00000553039 JMJD1CQ15652 2540 aa5.17□□□□□ -1.58
CKAP4-203ENST00000553039 MYH11P35749 1972 aa5.16□□□□□ -1.58
CKAP4-203ENST00000553039 BSNQ9UPA5 3926 aa5.16□□□□□ -1.58
CKAP4-203ENST00000553039 ANKRD34BA5PLL1 514 aa5.16□□□□□ -1.58
CKAP4-203ENST00000553039 A6NL46 340 aa5.16□□□□□ -1.58
CKAP4-203ENST00000553039 FIGNL2A6NMB9 653 aa5.16□□□□□ -1.58
CKAP4-203ENST00000553039 RASA4BC9J798 803 aa5.16□□□□□ -1.58
CKAP4-203ENST00000553039 ZNF185O15231 689 aa5.16□□□□□ -1.58
CKAP4-203ENST00000553039 PPM1DO15297 605 aa5.16□□□□□ -1.58
CKAP4-203ENST00000553039 TGFB1I1O43294 461 aa5.16□□□□□ -1.58
CKAP4-203ENST00000553039 RASA4O43374 803 aa5.16□□□□□ -1.58
CKAP4-203ENST00000553039 SMAD6O43541 496 aaKnown RBP5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms