RNA–Protein interactions for RNA: ENST00000550331.1

NEK3-201, Transcript of NIMA related kinase 3, humanhuman

TSL 2

Gene NEK3, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-201ENST00000550331 JAMLQ86YT9 394 aa7.63□□□□□ -1.19
NEK3-201ENST00000550331 ARFGAP1Q8N6T3 406 aa7.63□□□□□ -1.19
NEK3-201ENST00000550331 NPWQ8N729 165 aa7.63□□□□□ -1.19
NEK3-201ENST00000550331 PAF1Q8N7H5 531 aa7.63□□□□□ -1.19
NEK3-201ENST00000550331 ARMC2Q8NEN0 867 aa7.63□□□□□ -1.19
NEK3-201ENST00000550331 COQ10AQ96MF6 247 aa7.63□□□□□ -1.19
NEK3-201ENST00000550331 PEBP4Q96S96 227 aa7.63□□□□□ -1.19
NEK3-201ENST00000550331 KCTD15Q96SI1 283 aaPredicted RBP7.63□□□□□ -1.19
NEK3-201ENST00000550331 CMKLR1Q99788 373 aa7.63□□□□□ -1.19
NEK3-201ENST00000550331 ARHGAP9Q9BRR9 750 aa7.63□□□□□ -1.19
NEK3-201ENST00000550331 B3GNT4Q9C0J1 378 aa7.63□□□□□ -1.19
NEK3-201ENST00000550331 TMEM168Q9H0V1 697 aa7.63□□□□□ -1.19
NEK3-201ENST00000550331 HSD3B7Q9H2F3 369 aa7.63□□□□□ -1.19
NEK3-201ENST00000550331 DPEP2Q9H4A9 486 aa7.63□□□□□ -1.19
NEK3-201ENST00000550331 ZWILCHQ9H900 591 aa7.63□□□□□ -1.19
NEK3-201ENST00000550331 MRPL40Q9NQ50 206 aaKnown RBP7.63□□□□□ -1.19
NEK3-201ENST00000550331 TAS2R14Q9NYV8 317 aa7.63□□□□□ -1.19
NEK3-201ENST00000550331 ANKMY1Q9P2S6 941 aa7.63□□□□□ -1.19
NEK3-201ENST00000550331 LRIT1Q9P2V4 623 aa7.63□□□□□ -1.19
NEK3-201ENST00000550331 PCSK1NQ9UHG2 260 aa7.63□□□□□ -1.19
NEK3-201ENST00000550331 LOXL2Q9Y4K0 774 aa7.63□□□□□ -1.19
NEK3-201ENST00000550331 RNF215Q9Y6U7 377 aa7.63□□□□□ -1.19
NEK3-201ENST00000550331 NBASA2RRP1 2371 aa7.62□□□□□ -1.19
NEK3-201ENST00000550331 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.62□□□□□ -1.19
NEK3-201ENST00000550331 H3BRJ5 948 aa7.62□□□□□ -1.19
NEK3-201ENST00000550331 PSMD11O00231 422 aa7.62□□□□□ -1.19
NEK3-201ENST00000550331 ZW10O43264 779 aa7.62□□□□□ -1.19
NEK3-201ENST00000550331 EFSO43281 561 aa7.62□□□□□ -1.19
NEK3-201ENST00000550331 HTRA2O43464 458 aaPredicted RBP7.62□□□□□ -1.19
NEK3-201ENST00000550331 LRCH4O75427 683 aa7.62□□□□□ -1.19
NEK3-201ENST00000550331 HEXIM1O94992 359 aaKnown RBP7.62□□□□□ -1.19
NEK3-201ENST00000550331 CPNE6O95741 557 aa7.62□□□□□ -1.19
NEK3-201ENST00000550331 MYBL1P10243 752 aa7.62□□□□□ -1.19
NEK3-201ENST00000550331 HGFP14210 728 aa7.62□□□□□ -1.19
NEK3-201ENST00000550331 CCNB1P14635 433 aa7.62□□□□□ -1.19
NEK3-201ENST00000550331 CR2P20023 1033 aa7.62□□□□□ -1.19
NEK3-201ENST00000550331 CD82P27701 267 aa7.62□□□□□ -1.19
NEK3-201ENST00000550331 TEAD1P28347 426 aa7.62□□□□□ -1.19
NEK3-201ENST00000550331 MIPP30301 263 aa7.62□□□□□ -1.19
NEK3-201ENST00000550331 VIPR1P32241 457 aa7.62□□□□□ -1.19
NEK3-201ENST00000550331 PCK1P35558 622 aa7.62□□□□□ -1.19
NEK3-201ENST00000550331 SLC10A7Q0GE19 358 aa7.62□□□□□ -1.19
NEK3-201ENST00000550331 PEX6Q13608 980 aa7.62□□□□□ -1.19
NEK3-201ENST00000550331 ZNF235Q14590 738 aa7.62□□□□□ -1.19
NEK3-201ENST00000550331 LBRQ14739 615 aaKnown RBP7.62□□□□□ -1.19
NEK3-201ENST00000550331 NR1D2Q14995 579 aa7.62□□□□□ -1.19
NEK3-201ENST00000550331 ACOX1Q15067 660 aa7.62□□□□□ -1.19
NEK3-201ENST00000550331 DPYSL2Q16555 572 aa7.62□□□□□ -1.19
NEK3-201ENST00000550331 DBN1Q16643 649 aa7.62□□□□□ -1.19
NEK3-201ENST00000550331 PPP6R3Q5H9R7 873 aaPredicted RBP7.62□□□□□ -1.19
NEK3-201ENST00000550331 RALGPS1Q5JS13 557 aa7.62□□□□□ -1.19
NEK3-201ENST00000550331 ARHGAP36Q6ZRI8 547 aa7.62□□□□□ -1.19
NEK3-201ENST00000550331 ZNF438Q7Z4V0 828 aa7.62□□□□□ -1.19
NEK3-201ENST00000550331 C17orf82Q86X59 251 aaPredicted RBP7.62□□□□□ -1.19
NEK3-201ENST00000550331 SLITRK4Q8IW52 837 aa7.62□□□□□ -1.19
NEK3-201ENST00000550331 BBS5Q8N3I7 341 aa7.62□□□□□ -1.19
NEK3-201ENST00000550331 Q8N9G6 341 aaPredicted RBP7.62□□□□□ -1.19
NEK3-201ENST00000550331 GPBAR1Q8TDU6 330 aa7.62□□□□□ -1.19
NEK3-201ENST00000550331 NUS1Q96E22 293 aa7.62□□□□□ -1.19
NEK3-201ENST00000550331 SGF29Q96ES7 293 aa7.62□□□□□ -1.19
NEK3-201ENST00000550331 TRIM11Q96F44 468 aa7.62□□□□□ -1.19
NEK3-201ENST00000550331 DTD2Q96FN9 168 aa7.62□□□□□ -1.19
NEK3-201ENST00000550331 GBP4Q96PP9 640 aa7.62□□□□□ -1.19
NEK3-201ENST00000550331 NUDCD1Q96RS6 583 aa7.62□□□□□ -1.19
NEK3-201ENST00000550331 LGR4Q9BXB1 951 aa7.62□□□□□ -1.19
NEK3-201ENST00000550331 TEX101Q9BY14 249 aa7.62□□□□□ -1.19
NEK3-201ENST00000550331 GSDMCQ9BYG8 508 aa7.62□□□□□ -1.19
NEK3-201ENST00000550331 CYP4F12Q9HCS2 524 aa7.62□□□□□ -1.19
NEK3-201ENST00000550331 MRPL47Q9HD33 250 aaKnown RBP7.62□□□□□ -1.19
NEK3-201ENST00000550331 PHPT1Q9NRX4 125 aaPredicted RBP7.62□□□□□ -1.19
NEK3-201ENST00000550331 TRNAU1APQ9NX07 287 aaKnown RBP7.62□□□□□ -1.19
NEK3-201ENST00000550331 CWC15Q9P013 229 aaKnown RBP7.62□□□□□ -1.19
NEK3-201ENST00000550331 AKAP7Q9P0M2 348 aaPredicted RBP7.62□□□□□ -1.19
NEK3-201ENST00000550331 SEPT10Q9P0V9 454 aa7.62□□□□□ -1.19
NEK3-201ENST00000550331 B4GALT6Q9UBX8 382 aa7.62□□□□□ -1.19
NEK3-201ENST00000550331 CNOT8Q9UFF9 292 aaKnown RBP7.62□□□□□ -1.19
NEK3-201ENST00000550331 PISDQ9UG56 409 aa7.62□□□□□ -1.19
NEK3-201ENST00000550331 PHTF1Q9UMS5 762 aa7.62□□□□□ -1.19
NEK3-201ENST00000550331 SCINQ9Y6U3 715 aa7.62□□□□□ -1.19
NEK3-201ENST00000550331 NOTCH2Q04721 2471 aa7.62□□□□□ -1.19
NEK3-201ENST00000550331 CHD5Q8TDI0 1954 aa7.62□□□□□ -1.19
NEK3-201ENST00000550331 TRPM6Q9BX84 2022 aa7.61□□□□□ -1.19
NEK3-201ENST00000550331 USP9YO00507 2555 aaPredicted RBP7.61□□□□□ -1.19
NEK3-201ENST00000550331 PRAMEF33A0A0G2JMD5 474 aa7.61□□□□□ -1.19
NEK3-201ENST00000550331 A0A1W2PQC6 194 aa7.61□□□□□ -1.19
NEK3-201ENST00000550331 LRRC53A6NM62 1247 aa7.61□□□□□ -1.19
NEK3-201ENST00000550331 A8MX80 341 aa7.61□□□□□ -1.19
NEK3-201ENST00000550331 TMCO5BA8MYB1 307 aa7.61□□□□□ -1.19
NEK3-201ENST00000550331 C9orf172C9J069 976 aa7.61□□□□□ -1.19
NEK3-201ENST00000550331 HGSO14964 777 aaPredicted RBP7.61□□□□□ -1.19
NEK3-201ENST00000550331 TEX33O43247 280 aa7.61□□□□□ -1.19
NEK3-201ENST00000550331 SUV39H1O43463 412 aa7.61□□□□□ -1.19
NEK3-201ENST00000550331 PRAMEF10O60809 474 aa7.61□□□□□ -1.19
NEK3-201ENST00000550331 PEX11BO96011 259 aa7.61□□□□□ -1.19
NEK3-201ENST00000550331 CPP00450 1065 aa7.61□□□□□ -1.19
NEK3-201ENST00000550331 FTLP02792 175 aaPredicted RBP7.61□□□□□ -1.19
NEK3-201ENST00000550331 CEACAM5P06731 702 aa7.61□□□□□ -1.19
NEK3-201ENST00000550331 GP1BBP13224 206 aa7.61□□□□□ -1.19
NEK3-201ENST00000550331 ITIH1P19827 911 aa7.61□□□□□ -1.19
NEK3-201ENST00000550331 LHCGRP22888 699 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms