RNA–Protein interactions for RNA: ENST00000549094.1

SMPDL3B-206, Transcript of sphingomyelin phosphodiesterase acid like 3B, humanhuman

TSL 5 BASIC

Gene SMPDL3B, Length 1,611 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3B-206ENST00000549094 NRBF2Q96F24 287 aa13.42□□□□□ -0.26
SMPDL3B-206ENST00000549094 CELF6Q96J87 481 aaKnown RBP13.42□□□□□ -0.26
SMPDL3B-206ENST00000549094 TOX2Q96NM4 488 aa13.42□□□□□ -0.26
SMPDL3B-206ENST00000549094 PHF12Q96QT6 1004 aa13.42□□□□□ -0.26
SMPDL3B-206ENST00000549094 RPF2Q9H7B2 306 aaKnown RBP13.42□□□□□ -0.26
SMPDL3B-206ENST00000549094 SMPD3Q9NY59 655 aaPredicted RBP13.42□□□□□ -0.26
SMPDL3B-206ENST00000549094 GNPTGQ9UJJ9 305 aa13.42□□□□□ -0.26
SMPDL3B-206ENST00000549094 TTC24A2A3L6 582 aaPredicted RBP13.42□□□□□ -0.26
SMPDL3B-206ENST00000549094 TRIM64BA6NI03 449 aa13.42□□□□□ -0.26
SMPDL3B-206ENST00000549094 H3BMQ9 156 aa13.42□□□□□ -0.26
SMPDL3B-206ENST00000549094 GFAPP14136 432 aa13.42□□□□□ -0.26
SMPDL3B-206ENST00000549094 HOXC13P31276 330 aa13.42□□□□□ -0.26
SMPDL3B-206ENST00000549094 THPOP40225 353 aa13.42□□□□□ -0.26
SMPDL3B-206ENST00000549094 STT3AP46977 705 aa13.42□□□□□ -0.26
SMPDL3B-206ENST00000549094 LHX1P48742 406 aa13.42□□□□□ -0.26
SMPDL3B-206ENST00000549094 MRPL19P49406 292 aaKnown RBP13.42□□□□□ -0.26
SMPDL3B-206ENST00000549094 HERVK_113P63132 956 aa13.42□□□□□ -0.26
SMPDL3B-206ENST00000549094 MRPS6P82932 125 aaKnown RBP13.42□□□□□ -0.26
SMPDL3B-206ENST00000549094 TMEM62Q0P6H9 643 aa13.42□□□□□ -0.26
SMPDL3B-206ENST00000549094 GRSF1Q12849 480 aaKnown RBP eCLIP13.42□□□□□ -0.26
SMPDL3B-206ENST00000549094 CBX3Q13185 183 aa13.42□□□□□ -0.26
SMPDL3B-206ENST00000549094 TRIM60Q495X7 471 aa13.42□□□□□ -0.26
SMPDL3B-206ENST00000549094 BRMS1LQ5PSV4 323 aa13.42□□□□□ -0.26
SMPDL3B-206ENST00000549094 RBM20Q5T481 1227 aaKnown RBP13.42□□□□□ -0.26
SMPDL3B-206ENST00000549094 HECTD2Q5U5R9 776 aa13.42□□□□□ -0.26
SMPDL3B-206ENST00000549094 EFL1Q7Z2Z2 1120 aaKnown RBP13.42□□□□□ -0.26
SMPDL3B-206ENST00000549094 TBC1D21Q8IYX1 336 aa13.42□□□□□ -0.26
SMPDL3B-206ENST00000549094 ADGRG5Q8IZF4 528 aa13.42□□□□□ -0.26
SMPDL3B-206ENST00000549094 SCML4Q8N228 414 aa13.42□□□□□ -0.26
SMPDL3B-206ENST00000549094 SPATA6LQ8N4H0 392 aa13.42□□□□□ -0.26
SMPDL3B-206ENST00000549094 TRPV3Q8NET8 790 aa13.42□□□□□ -0.26
SMPDL3B-206ENST00000549094 SPATA22Q8NHS9 363 aa13.42□□□□□ -0.26
SMPDL3B-206ENST00000549094 GIPC3Q8TF64 312 aa13.42□□□□□ -0.26
SMPDL3B-206ENST00000549094 RNF34Q969K3 372 aa13.42□□□□□ -0.26
SMPDL3B-206ENST00000549094 MAGED4Q96JG8 741 aa13.42□□□□□ -0.26
SMPDL3B-206ENST00000549094 UBXN10Q96LJ8 280 aa13.42□□□□□ -0.26
SMPDL3B-206ENST00000549094 COG8Q96MW5 612 aa13.42□□□□□ -0.26
SMPDL3B-206ENST00000549094 ERVK-6Q9BXR3 956 aa13.42□□□□□ -0.26
SMPDL3B-206ENST00000549094 FNIP2Q9P278 1114 aa13.42□□□□□ -0.26
SMPDL3B-206ENST00000549094 SEPT3Q9UH03 358 aa13.42□□□□□ -0.26
SMPDL3B-206ENST00000549094 GINS2Q9Y248 185 aa13.42□□□□□ -0.26
SMPDL3B-206ENST00000549094 ATP11BQ9Y2G3 1177 aa13.42□□□□□ -0.26
SMPDL3B-206ENST00000549094 FADS3Q9Y5Q0 445 aa13.42□□□□□ -0.26
SMPDL3B-206ENST00000549094 RANBP2P49792 3224 aaKnown RBP13.41□□□□□ -0.26
SMPDL3B-206ENST00000549094 H0YAE9 185 aa13.41□□□□□ -0.26
SMPDL3B-206ENST00000549094 I6L893 689 aaPredicted RBP13.41□□□□□ -0.26
SMPDL3B-206ENST00000549094 ARPC2O15144 300 aa13.41□□□□□ -0.26
SMPDL3B-206ENST00000549094 ATP6V1G1O75348 118 aa13.41□□□□□ -0.26
SMPDL3B-206ENST00000549094 GPR32O75388 356 aa13.41□□□□□ -0.26
SMPDL3B-206ENST00000549094 BAIAP3O94812 1187 aa13.41□□□□□ -0.26
SMPDL3B-206ENST00000549094 SUPT7LO94864 414 aa13.41□□□□□ -0.26
SMPDL3B-206ENST00000549094 PORP16435 677 aaPredicted RBP13.41□□□□□ -0.26
SMPDL3B-206ENST00000549094 LBPP18428 481 aa13.41□□□□□ -0.26
SMPDL3B-206ENST00000549094 HDCP19113 662 aa13.41□□□□□ -0.26
SMPDL3B-206ENST00000549094 AKAP5P24588 427 aa13.41□□□□□ -0.26
SMPDL3B-206ENST00000549094 HLCSP50747 726 aa13.41□□□□□ -0.26
SMPDL3B-206ENST00000549094 PGGT1BP53609 377 aa13.41□□□□□ -0.26
SMPDL3B-206ENST00000549094 C21orf59P57076 290 aa13.41□□□□□ -0.26
SMPDL3B-206ENST00000549094 TLE2Q04725 743 aa13.41□□□□□ -0.26
SMPDL3B-206ENST00000549094 BFSP2Q13515 415 aa13.41□□□□□ -0.26
SMPDL3B-206ENST00000549094 RAB39AQ14964 217 aa13.41□□□□□ -0.26
SMPDL3B-206ENST00000549094 MOGQ16653 247 aa13.41□□□□□ -0.26
SMPDL3B-206ENST00000549094 CCNYL2Q5T2Q4 361 aa13.41□□□□□ -0.26
SMPDL3B-206ENST00000549094 BEND5Q7L4P6 421 aa13.41□□□□□ -0.26
SMPDL3B-206ENST00000549094 LYSMD3Q7Z3D4 306 aa13.41□□□□□ -0.26
SMPDL3B-206ENST00000549094 RNF135Q8IUD6 432 aa13.41□□□□□ -0.26
SMPDL3B-206ENST00000549094 PAPD5Q8NDF8 572 aaKnown RBP13.41□□□□□ -0.26
SMPDL3B-206ENST00000549094 SMARCD1Q96GM5 515 aa13.41□□□□□ -0.26
SMPDL3B-206ENST00000549094 OLFM1Q99784 485 aa13.41□□□□□ -0.26
SMPDL3B-206ENST00000549094 DCUN1D5Q9BTE7 237 aa13.41□□□□□ -0.26
SMPDL3B-206ENST00000549094 POLR1BQ9H9Y6 1135 aa13.41□□□□□ -0.26
SMPDL3B-206ENST00000549094 SLC2A6Q9UGQ3 507 aa13.41□□□□□ -0.26
SMPDL3B-206ENST00000549094 ANAPC2Q9UJX6 822 aa13.41□□□□□ -0.26
SMPDL3B-206ENST00000549094 PIN4Q9Y237 131 aaKnown RBP13.41□□□□□ -0.26
SMPDL3B-206ENST00000549094 TRPV2Q9Y5S1 764 aa13.41□□□□□ -0.26
SMPDL3B-206ENST00000549094 MIA3Q5JRA6 1907 aa13.41□□□□□ -0.26
SMPDL3B-206ENST00000549094 DLGAP1O14490 977 aa13.4□□□□□ -0.26
SMPDL3B-206ENST00000549094 MAGEB3O15480 346 aa13.4□□□□□ -0.26
SMPDL3B-206ENST00000549094 SLC7A4O43246 635 aa13.4□□□□□ -0.26
SMPDL3B-206ENST00000549094 CPNE6O95741 557 aa13.4□□□□□ -0.26
SMPDL3B-206ENST00000549094 MT-CYBP00156 380 aaPredicted RBP13.4□□□□□ -0.26
SMPDL3B-206ENST00000549094 FGF4P08620 206 aa13.4□□□□□ -0.26
SMPDL3B-206ENST00000549094 ALDOCP09972 364 aaKnown RBP13.4□□□□□ -0.26
SMPDL3B-206ENST00000549094 KCNA5P22460 613 aa13.4□□□□□ -0.26
SMPDL3B-206ENST00000549094 YWHAQP27348 245 aa13.4□□□□□ -0.26
SMPDL3B-206ENST00000549094 RFC2P35250 354 aa13.4□□□□□ -0.26
SMPDL3B-206ENST00000549094 RPS9P46781 194 aaKnown RBP13.4□□□□□ -0.26
SMPDL3B-206ENST00000549094 CRYBB1P53674 252 aaPredicted RBP13.4□□□□□ -0.26
SMPDL3B-206ENST00000549094 SLC5A3P53794 718 aa13.4□□□□□ -0.26
SMPDL3B-206ENST00000549094 TMBIM6P55061 237 aa13.4□□□□□ -0.26
SMPDL3B-206ENST00000549094 EEFSECP57772 596 aaKnown RBP13.4□□□□□ -0.26
SMPDL3B-206ENST00000549094 PHEXP78562 749 aa13.4□□□□□ -0.26
SMPDL3B-206ENST00000549094 TNK2Q07912 1038 aa13.4□□□□□ -0.26
SMPDL3B-206ENST00000549094 GRIK2Q13002 908 aa13.4□□□□□ -0.26
SMPDL3B-206ENST00000549094 TUBA3CQ13748 450 aa13.4□□□□□ -0.26
SMPDL3B-206ENST00000549094 LRRC26Q2I0M4 334 aa13.4□□□□□ -0.26
SMPDL3B-206ENST00000549094 TRIM71Q2Q1W2 868 aaKnown RBP13.4□□□□□ -0.26
SMPDL3B-206ENST00000549094 WSCD1Q658N2 575 aa13.4□□□□□ -0.26
SMPDL3B-206ENST00000549094 FAM43BQ6ZT52 329 aaPredicted RBP13.4□□□□□ -0.26
SMPDL3B-206ENST00000549094 SPATA19Q7Z5L4 167 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms