RNA–Protein interactions for RNA: ENST00000547372.5

RBFOX1-208, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 5 BASIC

Gene RBFOX1, Length 3,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-208ENST00000547372 VPS33BQ9H267 617 aa11.93□□□□□ -0.5
RBFOX1-208ENST00000547372 AS3MTQ9HBK9 375 aa11.93□□□□□ -0.5
RBFOX1-208ENST00000547372 RANGRFQ9HD47 186 aaPredicted RBP11.93□□□□□ -0.5
RBFOX1-208ENST00000547372 C8orf4Q9NR00 106 aa11.93□□□□□ -0.5
RBFOX1-208ENST00000547372 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.93□□□□□ -0.5
RBFOX1-208ENST00000547372 EIF3LQ9Y262 564 aaKnown RBP11.93□□□□□ -0.5
RBFOX1-208ENST00000547372 OR6C70A6NIJ9 312 aa11.93□□□□□ -0.5
RBFOX1-208ENST00000547372 TRIM24O15164 1050 aa11.93□□□□□ -0.5
RBFOX1-208ENST00000547372 SLC22A2O15244 555 aa11.93□□□□□ -0.5
RBFOX1-208ENST00000547372 LSM8O95777 96 aaKnown RBP11.93□□□□□ -0.5
RBFOX1-208ENST00000547372 NDST3O95803 873 aa11.93□□□□□ -0.5
RBFOX1-208ENST00000547372 AXLP30530 894 aa11.93□□□□□ -0.5
RBFOX1-208ENST00000547372 SKIV2LQ15477 1246 aaKnown RBP11.93□□□□□ -0.5
RBFOX1-208ENST00000547372 ATP6AP1Q15904 470 aa11.93□□□□□ -0.5
RBFOX1-208ENST00000547372 ANKRD34AQ69YU3 496 aa11.93□□□□□ -0.5
RBFOX1-208ENST00000547372 CDAN1Q8IWY9 1227 aa11.93□□□□□ -0.5
RBFOX1-208ENST00000547372 COLGALT2Q8IYK4 626 aa11.93□□□□□ -0.5
RBFOX1-208ENST00000547372 PACRGLQ8N7B6 248 aa11.93□□□□□ -0.5
RBFOX1-208ENST00000547372 PLD5Q8N7P1 536 aa11.93□□□□□ -0.5
RBFOX1-208ENST00000547372 RNF149Q8NC42 400 aa11.93□□□□□ -0.5
RBFOX1-208ENST00000547372 GLB1L3Q8NCI6 653 aaPredicted RBP11.93□□□□□ -0.5
RBFOX1-208ENST00000547372 NPLOC4Q8TAT6 608 aa11.93□□□□□ -0.5
RBFOX1-208ENST00000547372 PCNPQ8WW12 178 aaKnown RBP11.93□□□□□ -0.5
RBFOX1-208ENST00000547372 TOP1MTQ969P6 601 aa11.93□□□□□ -0.5
RBFOX1-208ENST00000547372 FKBP10Q96AY3 582 aa11.93□□□□□ -0.5
RBFOX1-208ENST00000547372 ERVK13-1Q9NX77 482 aa11.93□□□□□ -0.5
RBFOX1-208ENST00000547372 MRPL42Q9Y6G3 142 aaKnown RBP11.93□□□□□ -0.5
RBFOX1-208ENST00000547372 U3KQV3 271 aa11.93□□□□□ -0.5
RBFOX1-208ENST00000547372 PTPRJQ12913 1337 aa11.93□□□□□ -0.5
RBFOX1-208ENST00000547372 ARHGEF9O43307 516 aa11.93□□□□□ -0.5
RBFOX1-208ENST00000547372 CYBBP04839 570 aa11.93□□□□□ -0.5
RBFOX1-208ENST00000547372 LCP1P13796 627 aa11.93□□□□□ -0.5
RBFOX1-208ENST00000547372 PRKACGP22612 351 aa11.93□□□□□ -0.5
RBFOX1-208ENST00000547372 GSTM2P28161 218 aa11.93□□□□□ -0.5
RBFOX1-208ENST00000547372 IL12RB1P42701 662 aa11.93□□□□□ -0.5
RBFOX1-208ENST00000547372 GP2P55259 537 aaKnown RBP11.93□□□□□ -0.5
RBFOX1-208ENST00000547372 MAPRE2Q15555 327 aa11.93□□□□□ -0.5
RBFOX1-208ENST00000547372 TAB1Q15750 504 aa11.93□□□□□ -0.5
RBFOX1-208ENST00000547372 Q5BKY6 102 aa11.93□□□□□ -0.5
RBFOX1-208ENST00000547372 PRR5LQ6MZQ0 368 aa11.93□□□□□ -0.5
RBFOX1-208ENST00000547372 SLC51BQ86UW2 128 aa11.93□□□□□ -0.5
RBFOX1-208ENST00000547372 HORMAD1Q86X24 394 aa11.93□□□□□ -0.5
RBFOX1-208ENST00000547372 ERO1BQ86YB8 467 aa11.93□□□□□ -0.5
RBFOX1-208ENST00000547372 ZNF555Q8NEP9 628 aa11.93□□□□□ -0.5
RBFOX1-208ENST00000547372 TRPV3Q8NET8 790 aa11.93□□□□□ -0.5
RBFOX1-208ENST00000547372 SLC22A17Q8WUG5 538 aa11.93□□□□□ -0.5
RBFOX1-208ENST00000547372 PEX13Q92968 403 aa11.93□□□□□ -0.5
RBFOX1-208ENST00000547372 UHRF1Q96T88 793 aaPredicted RBP11.93□□□□□ -0.5
RBFOX1-208ENST00000547372 OXSMQ9NWU1 459 aa11.93□□□□□ -0.5
RBFOX1-208ENST00000547372 A0A0X1KG70 313 aa11.92□□□□□ -0.5
RBFOX1-208ENST00000547372 TRIM64A6NGJ6 449 aa11.92□□□□□ -0.5
RBFOX1-208ENST00000547372 NME4O00746 187 aa11.92□□□□□ -0.5
RBFOX1-208ENST00000547372 ACOX3O15254 700 aa11.92□□□□□ -0.5
RBFOX1-208ENST00000547372 TSPAN1O60635 241 aa11.92□□□□□ -0.5
RBFOX1-208ENST00000547372 OR7A10O76100 309 aa11.92□□□□□ -0.5
RBFOX1-208ENST00000547372 SFNP31947 248 aa11.92□□□□□ -0.5
RBFOX1-208ENST00000547372 EIF2DP41214 584 aaKnown RBP11.92□□□□□ -0.5
RBFOX1-208ENST00000547372 ST13P50502 369 aaKnown RBP11.92□□□□□ -0.5
RBFOX1-208ENST00000547372 BCAT1P54687 386 aa11.92□□□□□ -0.5
RBFOX1-208ENST00000547372 NIPAL4Q0D2K0 466 aa11.92□□□□□ -0.5
RBFOX1-208ENST00000547372 BAATQ14032 418 aaPredicted RBP11.92□□□□□ -0.5
RBFOX1-208ENST00000547372 RABL3Q5HYI8 236 aa11.92□□□□□ -0.5
RBFOX1-208ENST00000547372 STRADAQ7RTN6 431 aa11.92□□□□□ -0.5
RBFOX1-208ENST00000547372 SCUBE3Q8IX30 993 aa11.92□□□□□ -0.5
RBFOX1-208ENST00000547372 SVOPQ8N4V2 548 aa11.92□□□□□ -0.5
RBFOX1-208ENST00000547372 WDTC1Q8N5D0 677 aa11.92□□□□□ -0.5
RBFOX1-208ENST00000547372 CNIH3Q8TBE1 160 aa11.92□□□□□ -0.5
RBFOX1-208ENST00000547372 TFAP2BQ92481 460 aa11.92□□□□□ -0.5
RBFOX1-208ENST00000547372 LGALS12Q96DT0 336 aa11.92□□□□□ -0.5
RBFOX1-208ENST00000547372 SNX18Q96RF0 628 aa11.92□□□□□ -0.5
RBFOX1-208ENST00000547372 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.92□□□□□ -0.5
RBFOX1-208ENST00000547372 FNDC3AQ9Y2H6 1198 aaKnown RBP11.92□□□□□ -0.5
RBFOX1-208ENST00000547372 RGS5O15539 181 aa11.92□□□□□ -0.5
RBFOX1-208ENST00000547372 ACSL4O60488 711 aa11.92□□□□□ -0.5
RBFOX1-208ENST00000547372 TNFRSF21O75509 655 aa11.92□□□□□ -0.5
RBFOX1-208ENST00000547372 SOAT2O75908 522 aa11.92□□□□□ -0.5
RBFOX1-208ENST00000547372 MSH3P20585 1137 aa11.92□□□□□ -0.5
RBFOX1-208ENST00000547372 AZGP1P25311 298 aaKnown RBP11.92□□□□□ -0.5
RBFOX1-208ENST00000547372 FMO3P31513 532 aa11.92□□□□□ -0.5
RBFOX1-208ENST00000547372 GBE1Q04446 702 aa11.92□□□□□ -0.5
RBFOX1-208ENST00000547372 BST2Q10589 180 aaKnown RBP11.92□□□□□ -0.5
RBFOX1-208ENST00000547372 GRM3Q14832 879 aa11.92□□□□□ -0.5
RBFOX1-208ENST00000547372 EMC2Q15006 297 aa11.92□□□□□ -0.5
RBFOX1-208ENST00000547372 ZMYND11Q15326 602 aa11.92□□□□□ -0.5
RBFOX1-208ENST00000547372 TRIP4Q15650 581 aaPredicted RBP11.92□□□□□ -0.5
RBFOX1-208ENST00000547372 DPY19L1Q2PZI1 675 aa11.92□□□□□ -0.5
RBFOX1-208ENST00000547372 C6orf141Q5SZD1 244 aa11.92□□□□□ -0.5
RBFOX1-208ENST00000547372 LIPMQ5VYY2 423 aa11.92□□□□□ -0.5
RBFOX1-208ENST00000547372 CLEC6AQ6EIG7 209 aa11.92□□□□□ -0.5
RBFOX1-208ENST00000547372 ZNF534Q76KX8 674 aa11.92□□□□□ -0.5
RBFOX1-208ENST00000547372 NLGN4XQ8N0W4 816 aa11.92□□□□□ -0.5
RBFOX1-208ENST00000547372 CERS5Q8N5B7 392 aa11.92□□□□□ -0.5
RBFOX1-208ENST00000547372 OR6B3Q8NGW1 331 aa11.92□□□□□ -0.5
RBFOX1-208ENST00000547372 CEP19Q96LK0 163 aa11.92□□□□□ -0.5
RBFOX1-208ENST00000547372 PSKH2Q96QS6 385 aa11.92□□□□□ -0.5
RBFOX1-208ENST00000547372 CPXM1Q96SM3 734 aa11.92□□□□□ -0.5
RBFOX1-208ENST00000547372 PHOX2BQ99453 314 aa11.92□□□□□ -0.5
RBFOX1-208ENST00000547372 AIFM2Q9BRQ8 373 aa11.92□□□□□ -0.5
RBFOX1-208ENST00000547372 MAGEB5Q9BZ81 275 aa11.92□□□□□ -0.5
RBFOX1-208ENST00000547372 RPF1Q9H9Y2 349 aaKnown RBP11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms