RNA–Protein interactions for RNA: ENST00000546345.5

CCDC60-205, Transcript of coiled-coil domain containing 60, humanhuman

TSL 1 (best)

Gene CCDC60, Length 865 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-205ENST00000546345 VSNL1P62760 191 aa6.77□□□□□ -1.33
CCDC60-205ENST00000546345 CDK17Q00537 523 aa6.77□□□□□ -1.33
CCDC60-205ENST00000546345 RIPK1Q13546 671 aa6.77□□□□□ -1.33
CCDC60-205ENST00000546345 MORC3Q14149 939 aa6.77□□□□□ -1.33
CCDC60-205ENST00000546345 ZNF124Q15973 351 aa6.77□□□□□ -1.33
CCDC60-205ENST00000546345 CDKN3Q16667 212 aa6.77□□□□□ -1.33
CCDC60-205ENST00000546345 ISM2Q6H9L7 571 aa6.77□□□□□ -1.33
CCDC60-205ENST00000546345 SLFN12LQ6IEE8 588 aa6.77□□□□□ -1.33
CCDC60-205ENST00000546345 FAM173BQ6P4H8 233 aa6.77□□□□□ -1.33
CCDC60-205ENST00000546345 RBM44Q6ZP01 1051 aaKnown RBP6.77□□□□□ -1.33
CCDC60-205ENST00000546345 CHST9Q7L1S5 443 aa6.77□□□□□ -1.33
CCDC60-205ENST00000546345 TRAPPC11Q7Z392 1133 aa6.77□□□□□ -1.33
CCDC60-205ENST00000546345 SCD5Q86SK9 330 aa6.77□□□□□ -1.33
CCDC60-205ENST00000546345 GPBP1Q86WP2 473 aa6.77□□□□□ -1.33
CCDC60-205ENST00000546345 SLC22A18ASQ8N1D0 253 aa6.77□□□□□ -1.33
CCDC60-205ENST00000546345 ARL14Q8N4G2 192 aa6.77□□□□□ -1.33
CCDC60-205ENST00000546345 MMGT1Q8N4V1 131 aa6.77□□□□□ -1.33
CCDC60-205ENST00000546345 MYCT1Q8N699 235 aa6.77□□□□□ -1.33
CCDC60-205ENST00000546345 OR6B3Q8NGW1 331 aa6.77□□□□□ -1.33
CCDC60-205ENST00000546345 ALG3Q92685 438 aa6.77□□□□□ -1.33
CCDC60-205ENST00000546345 SMARCD1Q96GM5 515 aa6.77□□□□□ -1.33
CCDC60-205ENST00000546345 RSRC1Q96IZ7 334 aaKnown RBP6.77□□□□□ -1.33
CCDC60-205ENST00000546345 CBWD1Q9BRT8 395 aa6.77□□□□□ -1.33
CCDC60-205ENST00000546345 JAM3Q9BX67 310 aa6.77□□□□□ -1.33
CCDC60-205ENST00000546345 FGFBP2Q9BYJ0 223 aa6.77□□□□□ -1.33
CCDC60-205ENST00000546345 SLC2A11Q9BYW1 496 aa6.77□□□□□ -1.33
CCDC60-205ENST00000546345 CDIP1Q9H305 208 aa6.77□□□□□ -1.33
CCDC60-205ENST00000546345 EPB41L1Q9H4G0 881 aa6.77□□□□□ -1.33
CCDC60-205ENST00000546345 CSNK1G1Q9HCP0 422 aa6.77□□□□□ -1.33
CCDC60-205ENST00000546345 TLR8Q9NR97 1041 aaKnown RBP6.77□□□□□ -1.33
CCDC60-205ENST00000546345 BLOC1S4Q9NUP1 217 aa6.77□□□□□ -1.33
CCDC60-205ENST00000546345 ABCB8Q9NUT2 735 aa6.77□□□□□ -1.33
CCDC60-205ENST00000546345 INTS13Q9NVM9 706 aa6.77□□□□□ -1.33
CCDC60-205ENST00000546345 NLGN3Q9NZ94 848 aa6.77□□□□□ -1.33
CCDC60-205ENST00000546345 SEL1LQ9UBV2 794 aa6.77□□□□□ -1.33
CCDC60-205ENST00000546345 HMGXB4Q9UGU5 601 aa6.77□□□□□ -1.33
CCDC60-205ENST00000546345 MCM8Q9UJA3 840 aa6.77□□□□□ -1.33
CCDC60-205ENST00000546345 AGO1Q9UL18 857 aaKnown RBP6.77□□□□□ -1.33
CCDC60-205ENST00000546345 UBE4BO95155 1302 aa6.76□□□□□ -1.33
CCDC60-205ENST00000546345 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP6.76□□□□□ -1.33
CCDC60-205ENST00000546345 A0A1B0GVL5 298 aa6.76□□□□□ -1.33
CCDC60-205ENST00000546345 WIPF3A6NGB9 483 aa6.76□□□□□ -1.33
CCDC60-205ENST00000546345 LRRC72A6NJI9 287 aa6.76□□□□□ -1.33
CCDC60-205ENST00000546345 NDUFAB1O14561 156 aa6.76□□□□□ -1.33
CCDC60-205ENST00000546345 HSF2BPO75031 334 aa6.76□□□□□ -1.33
CCDC60-205ENST00000546345 RNASEH2AO75792 299 aaKnown RBP6.76□□□□□ -1.33
CCDC60-205ENST00000546345 CLDN1O95832 211 aa6.76□□□□□ -1.33
CCDC60-205ENST00000546345 KRT1P04264 644 aa6.76□□□□□ -1.33
CCDC60-205ENST00000546345 GSTA1P08263 222 aa6.76□□□□□ -1.33
CCDC60-205ENST00000546345 DLDP09622 509 aaKnown RBP6.76□□□□□ -1.33
CCDC60-205ENST00000546345 TMEM191BP0C7N4 346 aa6.76□□□□□ -1.33
CCDC60-205ENST00000546345 RARGP13631 454 aa6.76□□□□□ -1.33
CCDC60-205ENST00000546345 CCDC130P13994 396 aa6.76□□□□□ -1.33
CCDC60-205ENST00000546345 TCP1P17987 556 aaKnown RBP6.76□□□□□ -1.33
CCDC60-205ENST00000546345 UGT1A5P35504 534 aa6.76□□□□□ -1.33
CCDC60-205ENST00000546345 CYLC1P35663 651 aaPredicted RBP6.76□□□□□ -1.33
CCDC60-205ENST00000546345 GNL1P36915 607 aaPredicted RBP6.76□□□□□ -1.33
CCDC60-205ENST00000546345 PRPHP41219 470 aa6.76□□□□□ -1.33
CCDC60-205ENST00000546345 TRAPPC10P48553 1259 aa6.76□□□□□ -1.33
CCDC60-205ENST00000546345 FNTAP49354 379 aa6.76□□□□□ -1.33
CCDC60-205ENST00000546345 CASP5P51878 434 aa6.76□□□□□ -1.33
CCDC60-205ENST00000546345 GUCY1A3Q02108 690 aa6.76□□□□□ -1.33
CCDC60-205ENST00000546345 GOLGA8FQ08AF8 430 aa6.76□□□□□ -1.33
CCDC60-205ENST00000546345 GOLGA8DPQ0D2H9 430 aa6.76□□□□□ -1.33
CCDC60-205ENST00000546345 ZNF177Q13360 481 aaPredicted RBP6.76□□□□□ -1.33
CCDC60-205ENST00000546345 TRIM29Q14134 588 aa6.76□□□□□ -1.33
CCDC60-205ENST00000546345 SNCBQ16143 134 aa6.76□□□□□ -1.33
CCDC60-205ENST00000546345 RILPL1Q5EBL4 403 aa6.76□□□□□ -1.33
CCDC60-205ENST00000546345 ZNF569Q5MCW4 686 aa6.76□□□□□ -1.33
CCDC60-205ENST00000546345 C1QL3Q5VWW1 255 aa6.76□□□□□ -1.33
CCDC60-205ENST00000546345 CAPRIN2Q6IMN6 1127 aaKnown RBP6.76□□□□□ -1.33
CCDC60-205ENST00000546345 EFL1Q7Z2Z2 1120 aaKnown RBP6.76□□□□□ -1.33
CCDC60-205ENST00000546345 C14orf80Q86SX3 495 aa6.76□□□□□ -1.33
CCDC60-205ENST00000546345 MTDHQ86UE4 582 aaKnown RBP6.76□□□□□ -1.33
CCDC60-205ENST00000546345 SFR1Q86XK3 245 aa6.76□□□□□ -1.33
CCDC60-205ENST00000546345 EGFL6Q8IUX8 553 aa6.76□□□□□ -1.33
CCDC60-205ENST00000546345 TRIM58Q8NG06 486 aa6.76□□□□□ -1.33
CCDC60-205ENST00000546345 WFIKKN2Q8TEU8 576 aa6.76□□□□□ -1.33
CCDC60-205ENST00000546345 NOC3LQ8WTT2 800 aaKnown RBP6.76□□□□□ -1.33
CCDC60-205ENST00000546345 SSC4DQ8WTU2 575 aa6.76□□□□□ -1.33
CCDC60-205ENST00000546345 MZB1Q8WU39 189 aa6.76□□□□□ -1.33
CCDC60-205ENST00000546345 GRAMD1AQ96CP6 724 aa6.76□□□□□ -1.33
CCDC60-205ENST00000546345 LMLNQ96KR4 655 aa6.76□□□□□ -1.33
CCDC60-205ENST00000546345 NOX5Q96PH1 765 aa6.76□□□□□ -1.33
CCDC60-205ENST00000546345 SH3GL3Q99963 347 aa6.76□□□□□ -1.33
CCDC60-205ENST00000546345 SDCBP2Q9H190 292 aa6.76□□□□□ -1.33
CCDC60-205ENST00000546345 XYLT2Q9H1B5 865 aa6.76□□□□□ -1.33
CCDC60-205ENST00000546345 SMYD3Q9H7B4 428 aa6.76□□□□□ -1.33
CCDC60-205ENST00000546345 KLC4Q9NSK0 619 aa6.76□□□□□ -1.33
CCDC60-205ENST00000546345 SPATS2LQ9NUQ6 558 aaKnown RBP6.76□□□□□ -1.33
CCDC60-205ENST00000546345 COMMD8Q9NX08 183 aa6.76□□□□□ -1.33
CCDC60-205ENST00000546345 FOXJ2Q9P0K8 574 aa6.76□□□□□ -1.33
CCDC60-205ENST00000546345 PPARGC1AQ9UBK2 798 aaKnown RBP6.76□□□□□ -1.33
CCDC60-205ENST00000546345 CYTH4Q9UIA0 394 aa6.76□□□□□ -1.33
CCDC60-205ENST00000546345 SCML1Q9UN30 329 aa6.76□□□□□ -1.33
CCDC60-205ENST00000546345 SCML2Q9UQR0 700 aa6.76□□□□□ -1.33
CCDC60-205ENST00000546345 PRAMEF33A0A0G2JMD5 474 aa6.75□□□□□ -1.33
CCDC60-205ENST00000546345 CCDC189A1A4V9 331 aa6.75□□□□□ -1.33
CCDC60-205ENST00000546345 EME2A4GXA9 379 aaPredicted RBP6.75□□□□□ -1.33
CCDC60-205ENST00000546345 LRRIQ3A6PVS8 624 aaPredicted RBP6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms