RNA–Protein interactions for RNA: ENST00000543356.6

GNE-206, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-206ENST00000543356 USP45Q70EL2 814 aa9.31□□□□□ -0.92
GNE-206ENST00000543356 OTOAQ7RTW8 1153 aa9.31□□□□□ -0.92
GNE-206ENST00000543356 LDB1Q86U70 411 aaPredicted RBP9.31□□□□□ -0.92
GNE-206ENST00000543356 CENPLQ8N0S6 344 aaPredicted RBP9.31□□□□□ -0.92
GNE-206ENST00000543356 CYB5D2Q8WUJ1 264 aa9.31□□□□□ -0.92
GNE-206ENST00000543356 LPGAT1Q92604 370 aa9.31□□□□□ -0.92
GNE-206ENST00000543356 ELSPBP1Q96BH3 223 aa9.31□□□□□ -0.92
GNE-206ENST00000543356 ZFYVE19Q96K21 471 aa9.31□□□□□ -0.92
GNE-206ENST00000543356 NDNQ99608 321 aa9.31□□□□□ -0.92
GNE-206ENST00000543356 TSSK1BQ9BXA7 367 aa9.31□□□□□ -0.92
GNE-206ENST00000543356 ZFYVE1Q9HBF4 777 aa9.31□□□□□ -0.92
GNE-206ENST00000543356 NMRAL1Q9HBL8 299 aa9.31□□□□□ -0.92
GNE-206ENST00000543356 COPG2Q9UBF2 871 aa9.31□□□□□ -0.92
GNE-206ENST00000543356 VWA7Q9Y334 891 aa9.31□□□□□ -0.92
GNE-206ENST00000543356 C1orf232A0A0U1RR37 186 aa9.3□□□□□ -0.92
GNE-206ENST00000543356 TTC34A8MYJ7 566 aa9.3□□□□□ -0.92
GNE-206ENST00000543356 PFDN6O15212 129 aa9.3□□□□□ -0.92
GNE-206ENST00000543356 KLHL2O95198 593 aa9.3□□□□□ -0.92
GNE-206ENST00000543356 PMLP29590 882 aa9.3□□□□□ -0.92
GNE-206ENST00000543356 ALDH3A1P30838 453 aa9.3□□□□□ -0.92
GNE-206ENST00000543356 GMPRP36959 345 aa9.3□□□□□ -0.92
GNE-206ENST00000543356 TTPAP49638 278 aa9.3□□□□□ -0.92
GNE-206ENST00000543356 CACNG1Q06432 222 aa9.3□□□□□ -0.92
GNE-206ENST00000543356 NAA25Q14CX7 972 aa9.3□□□□□ -0.92
GNE-206ENST00000543356 CHI3L2Q15782 390 aa9.3□□□□□ -0.92
GNE-206ENST00000543356 PDCD2Q16342 344 aaPredicted RBP9.3□□□□□ -0.92
GNE-206ENST00000543356 TPRG1Q6ZUI0 275 aa9.3□□□□□ -0.92
GNE-206ENST00000543356 CBARPQ8N350 705 aaPredicted RBP9.3□□□□□ -0.92
GNE-206ENST00000543356 PAF1Q8N7H5 531 aa9.3□□□□□ -0.92
GNE-206ENST00000543356 CHST14Q8NCH0 376 aa9.3□□□□□ -0.92
GNE-206ENST00000543356 TTC8Q8TAM2 541 aa9.3□□□□□ -0.92
GNE-206ENST00000543356 GRIN3AQ8TCU5 1115 aa9.3□□□□□ -0.92
GNE-206ENST00000543356 HCAR2Q8TDS4 363 aa9.3□□□□□ -0.92
GNE-206ENST00000543356 EID2BQ96D98 161 aa9.3□□□□□ -0.92
GNE-206ENST00000543356 CCDC97Q96F63 343 aaPredicted RBP9.3□□□□□ -0.92
GNE-206ENST00000543356 SCRN2Q96FV2 425 aa9.3□□□□□ -0.92
GNE-206ENST00000543356 LRIG1Q96JA1 1093 aa9.3□□□□□ -0.92
GNE-206ENST00000543356 RIPOR3Q96MK2 946 aa9.3□□□□□ -0.92
GNE-206ENST00000543356 C7orf26Q96N11 449 aa9.3□□□□□ -0.92
GNE-206ENST00000543356 MYADMQ96S97 322 aa9.3□□□□□ -0.92
GNE-206ENST00000543356 HEPHQ9BQS7 1158 aa9.3□□□□□ -0.92
GNE-206ENST00000543356 AARSD1Q9BTE6 412 aaKnown RBP9.3□□□□□ -0.92
GNE-206ENST00000543356 OSBPL1AQ9BXW6 950 aa9.3□□□□□ -0.92
GNE-206ENST00000543356 CIPCQ9C0C6 399 aa9.3□□□□□ -0.92
GNE-206ENST00000543356 ZNF358Q9NW07 568 aa9.3□□□□□ -0.92
GNE-206ENST00000543356 ELOVL2Q9NXB9 296 aa9.3□□□□□ -0.92
GNE-206ENST00000543356 DEC1Q9P2X7 70 aa9.3□□□□□ -0.92
GNE-206ENST00000543356 OTOL1A6NHN0 477 aaPredicted RBP9.3□□□□□ -0.92
GNE-206ENST00000543356 SNNO75324 88 aaPredicted RBP9.3□□□□□ -0.92
GNE-206ENST00000543356 TBX10O75333 385 aa9.3□□□□□ -0.92
GNE-206ENST00000543356 TGDSO95455 350 aa9.3□□□□□ -0.92
GNE-206ENST00000543356 UGT2B4P06133 528 aa9.3□□□□□ -0.92
GNE-206ENST00000543356 FGF3P11487 239 aaPredicted RBP9.3□□□□□ -0.92
GNE-206ENST00000543356 CPA3P15088 417 aa9.3□□□□□ -0.92
GNE-206ENST00000543356 PTPN5P54829 565 aa9.3□□□□□ -0.92
GNE-206ENST00000543356 POLR2LP62875 67 aaKnown RBP9.3□□□□□ -0.92
GNE-206ENST00000543356 ZNF460Q14592 562 aa9.3□□□□□ -0.92
GNE-206ENST00000543356 CTC1Q2NKJ3 1217 aa9.3□□□□□ -0.92
GNE-206ENST00000543356 LRRC8EQ6NSJ5 796 aa9.3□□□□□ -0.92
GNE-206ENST00000543356 ZNF549Q6P9A3 640 aa9.3□□□□□ -0.92
GNE-206ENST00000543356 BRAT1Q6PJG6 821 aa9.3□□□□□ -0.92
GNE-206ENST00000543356 TBC1D1Q86TI0 1168 aaPredicted RBP9.3□□□□□ -0.92
GNE-206ENST00000543356 PHTF2Q8N3S3 785 aa9.3□□□□□ -0.92
GNE-206ENST00000543356 KCTD4Q8WVF5 259 aa9.3□□□□□ -0.92
GNE-206ENST00000543356 SORCS1Q8WY21 1168 aa9.3□□□□□ -0.92
GNE-206ENST00000543356 GPR78Q96P69 363 aa9.3□□□□□ -0.92
GNE-206ENST00000543356 PRO3102Q9H379 93 aa9.3□□□□□ -0.92
GNE-206ENST00000543356 ZNF576Q9H609 170 aa9.3□□□□□ -0.92
GNE-206ENST00000543356 BPIFA1Q9NP55 256 aa9.3□□□□□ -0.92
GNE-206ENST00000543356 KLHL14Q9P2G3 628 aa9.3□□□□□ -0.92
GNE-206ENST00000543356 BLOC1S6Q9UL45 172 aa9.3□□□□□ -0.92
GNE-206ENST00000543356 ARL2BPQ9Y2Y0 163 aa9.3□□□□□ -0.92
GNE-206ENST00000543356 WASF2Q9Y6W5 498 aa9.3□□□□□ -0.92
GNE-206ENST00000543356 NPIPB15A6NHN6 443 aaPredicted RBP9.29□□□□□ -0.92
GNE-206ENST00000543356 G3V2L1 256 aa9.29□□□□□ -0.92
GNE-206ENST00000543356 BNIP3LO60238 219 aa9.29□□□□□ -0.92
GNE-206ENST00000543356 H2AFYO75367 372 aaKnown RBP9.29□□□□□ -0.92
GNE-206ENST00000543356 NDUFS3O75489 264 aa9.29□□□□□ -0.92
GNE-206ENST00000543356 PRSS56P0CW18 603 aa9.29□□□□□ -0.92
GNE-206ENST00000543356 BMP1P13497 986 aa9.29□□□□□ -0.92
GNE-206ENST00000543356 EIF2DP41214 584 aaKnown RBP9.29□□□□□ -0.92
GNE-206ENST00000543356 MTHFRP42898 656 aa9.29□□□□□ -0.92
GNE-206ENST00000543356 MAGEA8P43361 318 aa9.29□□□□□ -0.92
GNE-206ENST00000543356 SLC6A11P48066 632 aa9.29□□□□□ -0.92
GNE-206ENST00000543356 PRKAA2P54646 552 aa9.29□□□□□ -0.92
GNE-206ENST00000543356 ADARP55265 1226 aaKnown RBP9.29□□□□□ -0.92
GNE-206ENST00000543356 CDKN2DP55273 166 aa9.29□□□□□ -0.92
GNE-206ENST00000543356 ST8SIA6P61647 398 aa9.29□□□□□ -0.92
GNE-206ENST00000543356 IRX4P78413 519 aa9.29□□□□□ -0.92
GNE-206ENST00000543356 OCRLQ01968 901 aa9.29□□□□□ -0.92
GNE-206ENST00000543356 BST1Q10588 318 aa9.29□□□□□ -0.92
GNE-206ENST00000543356 THEMIS2Q5TEJ8 643 aa9.29□□□□□ -0.92
GNE-206ENST00000543356 PSAPL1Q6NUJ1 521 aa9.29□□□□□ -0.92
GNE-206ENST00000543356 ZYG11AQ6WRX3 759 aa9.29□□□□□ -0.92
GNE-206ENST00000543356 YAF2Q8IY57 180 aa9.29□□□□□ -0.92
GNE-206ENST00000543356 ZNF398Q8TD17 642 aa9.29□□□□□ -0.92
GNE-206ENST00000543356 NXPE3Q969Y0 559 aa9.29□□□□□ -0.92
GNE-206ENST00000543356 TBRG4Q969Z0 631 aaKnown RBP eCLIP9.29□□□□□ -0.92
GNE-206ENST00000543356 SPDL1Q96EA4 605 aa9.29□□□□□ -0.92
GNE-206ENST00000543356 SLX1AQ9BQ83 275 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms