RNA–Protein interactions for RNA: ENST00000542068.5

CNOT9-208, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CNOT9, Length 3,259 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-208ENST00000542068 TMEM86AQ8N2M4 240 aa15.3■□□□□ 0.04
CNOT9-208ENST00000542068 BPIFB6Q8NFQ5 453 aa15.3■□□□□ 0.04
CNOT9-208ENST00000542068 RPRD1AQ96P16 312 aaPredicted RBP15.3■□□□□ 0.04
CNOT9-208ENST00000542068 CYP2S1Q96SQ9 504 aa15.3■□□□□ 0.04
CNOT9-208ENST00000542068 ANKRD60Q9BZ19 345 aa15.3■□□□□ 0.04
CNOT9-208ENST00000542068 ADNPQ9H2P0 1102 aa15.3■□□□□ 0.04
CNOT9-208ENST00000542068 GSTO2Q9H4Y5 243 aa15.3■□□□□ 0.04
CNOT9-208ENST00000542068 CMTM6Q9NX76 183 aa15.3■□□□□ 0.04
CNOT9-208ENST00000542068 SLAMF8Q9P0V8 285 aa15.3■□□□□ 0.04
CNOT9-208ENST00000542068 MAGEA10P43363 369 aaPredicted RBP15.3■□□□□ 0.04
CNOT9-208ENST00000542068 POU4F1Q01851 419 aa15.3■□□□□ 0.04
CNOT9-208ENST00000542068 DSC2Q02487 901 aa15.3■□□□□ 0.04
CNOT9-208ENST00000542068 INTS6LQ5JSJ4 861 aaKnown RBP15.3■□□□□ 0.04
CNOT9-208ENST00000542068 RAP1GAP2Q684P5 730 aa15.3■□□□□ 0.04
CNOT9-208ENST00000542068 PPP4R4Q6NUP7 873 aa15.3■□□□□ 0.04
CNOT9-208ENST00000542068 BORAQ6PGQ7 559 aa15.3■□□□□ 0.04
CNOT9-208ENST00000542068 GPR180Q86V85 440 aa15.3■□□□□ 0.04
CNOT9-208ENST00000542068 PARP8Q8N3A8 854 aa15.3■□□□□ 0.04
CNOT9-208ENST00000542068 C2CD4AQ8NCU7 369 aaPredicted RBP15.3■□□□□ 0.04
CNOT9-208ENST00000542068 PTERQ96BW5 349 aa15.3■□□□□ 0.04
CNOT9-208ENST00000542068 MRGPRX2Q96LB1 330 aa15.3■□□□□ 0.04
CNOT9-208ENST00000542068 VAT1Q99536 393 aa15.3■□□□□ 0.04
CNOT9-208ENST00000542068 LTB4R2Q9NPC1 389 aa15.3■□□□□ 0.04
CNOT9-208ENST00000542068 NDUFAF1Q9Y375 327 aa15.3■□□□□ 0.04
CNOT9-208ENST00000542068 WDR90Q96KV7 1748 aa15.3■□□□□ 0.04
CNOT9-208ENST00000542068 ZBTB11O95625 1053 aaPredicted RBP15.3■□□□□ 0.04
CNOT9-208ENST00000542068 ELK4P28324 431 aa15.3■□□□□ 0.04
CNOT9-208ENST00000542068 RPL34P49207 117 aaKnown RBP15.3■□□□□ 0.04
CNOT9-208ENST00000542068 HK2P52789 917 aa15.3■□□□□ 0.04
CNOT9-208ENST00000542068 PIGFQ07326 219 aa15.3■□□□□ 0.04
CNOT9-208ENST00000542068 RAB39AQ14964 217 aa15.3■□□□□ 0.04
CNOT9-208ENST00000542068 USP41Q3LFD5 358 aa15.3■□□□□ 0.04
CNOT9-208ENST00000542068 C10orf120Q5SQS8 335 aa15.3■□□□□ 0.04
CNOT9-208ENST00000542068 ELMSAN1Q6PJG2 1045 aa15.3■□□□□ 0.04
CNOT9-208ENST00000542068 TTC9BQ8N6N2 239 aa15.3■□□□□ 0.04
CNOT9-208ENST00000542068 RNF145Q96MT1 663 aa15.3■□□□□ 0.04
CNOT9-208ENST00000542068 FAM210AQ96ND0 272 aa15.3■□□□□ 0.04
CNOT9-208ENST00000542068 CATSPERBQ9H7T0 1116 aa15.3■□□□□ 0.04
CNOT9-208ENST00000542068 RGS18Q9NS28 235 aa15.3■□□□□ 0.04
CNOT9-208ENST00000542068 FAM50BQ9Y247 325 aa15.3■□□□□ 0.04
CNOT9-208ENST00000542068 DNAJC15Q9Y5T4 150 aa15.3■□□□□ 0.04
CNOT9-208ENST00000542068 GOLGA4Q13439 2230 aaKnown RBP15.3■□□□□ 0.04
CNOT9-208ENST00000542068 ARPC2O15144 300 aa15.29■□□□□ 0.04
CNOT9-208ENST00000542068 CNTN5O94779 1100 aa15.29■□□□□ 0.04
CNOT9-208ENST00000542068 ASGR1P07306 291 aa15.29■□□□□ 0.04
CNOT9-208ENST00000542068 MAP4P27816 1152 aaKnown RBP15.29■□□□□ 0.04
CNOT9-208ENST00000542068 GEMP55040 296 aa15.29■□□□□ 0.04
CNOT9-208ENST00000542068 UPP1Q16831 310 aa15.29■□□□□ 0.04
CNOT9-208ENST00000542068 DCLRE1AQ6PJP8 1040 aa15.29■□□□□ 0.04
CNOT9-208ENST00000542068 ZNF280BQ86YH2 543 aa15.29■□□□□ 0.04
CNOT9-208ENST00000542068 NTAN1Q96AB6 310 aa15.29■□□□□ 0.04
CNOT9-208ENST00000542068 ZNF510Q9Y2H8 683 aa15.29■□□□□ 0.04
CNOT9-208ENST00000542068 C1orf232A0A0U1RR37 186 aa15.29■□□□□ 0.04
CNOT9-208ENST00000542068 UGT1A1P22309 533 aa15.29■□□□□ 0.04
CNOT9-208ENST00000542068 UGT1A4P22310 534 aa15.29■□□□□ 0.04
CNOT9-208ENST00000542068 UGT1A3P35503 534 aa15.29■□□□□ 0.04
CNOT9-208ENST00000542068 UGT1A5P35504 534 aa15.29■□□□□ 0.04
CNOT9-208ENST00000542068 PFKPQ01813 784 aa15.29■□□□□ 0.04
CNOT9-208ENST00000542068 SLC10A7Q0GE19 358 aa15.29■□□□□ 0.04
CNOT9-208ENST00000542068 CBX3Q13185 183 aa15.29■□□□□ 0.04
CNOT9-208ENST00000542068 ZBED5Q49AG3 693 aa15.29■□□□□ 0.04
CNOT9-208ENST00000542068 UNC50Q53HI1 259 aa15.29■□□□□ 0.04
CNOT9-208ENST00000542068 TWIST2Q8WVJ9 160 aa15.29■□□□□ 0.04
CNOT9-208ENST00000542068 SGCDQ92629 289 aa15.29■□□□□ 0.04
CNOT9-208ENST00000542068 TBATAQ96M53 351 aa15.29■□□□□ 0.04
CNOT9-208ENST00000542068 CNOT11Q9UKZ1 510 aaKnown RBP15.29■□□□□ 0.04
CNOT9-208ENST00000542068 PADI4Q9UM07 663 aa15.29■□□□□ 0.04
CNOT9-208ENST00000542068 DLGAP1O14490 977 aa15.28■□□□□ 0.04
CNOT9-208ENST00000542068 MAN1A2O60476 641 aa15.28■□□□□ 0.04
CNOT9-208ENST00000542068 TRAP1Q12931 704 aaKnown RBP15.28■□□□□ 0.04
CNOT9-208ENST00000542068 ARHGAP12Q8IWW6 846 aa15.28■□□□□ 0.04
CNOT9-208ENST00000542068 MIER2Q8N344 545 aa15.28■□□□□ 0.04
CNOT9-208ENST00000542068 DHRSXQ8N5I4 330 aa15.28■□□□□ 0.04
CNOT9-208ENST00000542068 SMYD1Q8NB12 490 aa15.28■□□□□ 0.04
CNOT9-208ENST00000542068 SLC9A7Q96T83 725 aa15.28■□□□□ 0.04
CNOT9-208ENST00000542068 FAM124BQ9H5Z6 455 aaPredicted RBP15.28■□□□□ 0.04
CNOT9-208ENST00000542068 ZFYVE28Q9HCC9 887 aa15.28■□□□□ 0.04
CNOT9-208ENST00000542068 SARS2Q9NP81 518 aaKnown RBP15.28■□□□□ 0.04
CNOT9-208ENST00000542068 PFDN4Q9NQP4 134 aa15.28■□□□□ 0.04
CNOT9-208ENST00000542068 TBC1D23Q9NUY8 699 aa15.28■□□□□ 0.04
CNOT9-208ENST00000542068 TBC1D13Q9NVG8 400 aa15.28■□□□□ 0.04
CNOT9-208ENST00000542068 SELENONQ9NZV5 590 aa15.28■□□□□ 0.04
CNOT9-208ENST00000542068 WARS2Q9UGM6 360 aaKnown RBP15.28■□□□□ 0.04
CNOT9-208ENST00000542068 CIDEBQ9UHD4 219 aa15.28■□□□□ 0.04
CNOT9-208ENST00000542068 SUPT3HB4E1H0 165 aa15.28■□□□□ 0.04
CNOT9-208ENST00000542068 E9PAM4 449 aa15.28■□□□□ 0.04
CNOT9-208ENST00000542068 H3BMQ9 156 aa15.28■□□□□ 0.04
CNOT9-208ENST00000542068 MAFKO60675 156 aa15.28■□□□□ 0.04
CNOT9-208ENST00000542068 RBP1P09455 135 aa15.28■□□□□ 0.04
CNOT9-208ENST00000542068 GPX3P22352 226 aa15.28■□□□□ 0.04
CNOT9-208ENST00000542068 C21orf59P57076 290 aa15.28■□□□□ 0.04
CNOT9-208ENST00000542068 LARP4Q71RC2 724 aaKnown RBP eCLIP15.28■□□□□ 0.047e-8■□□□□ 8.8
CNOT9-208ENST00000542068 LYSMD3Q7Z3D4 306 aa15.28■□□□□ 0.04
CNOT9-208ENST00000542068 GIPC2Q8TF65 315 aa15.28■□□□□ 0.04
CNOT9-208ENST00000542068 PSMG2Q969U7 264 aa15.28■□□□□ 0.04
CNOT9-208ENST00000542068 FAR2Q96K12 515 aa15.28■□□□□ 0.04
CNOT9-208ENST00000542068 COG8Q96MW5 612 aa15.28■□□□□ 0.04
CNOT9-208ENST00000542068 ACOX2Q99424 681 aa15.28■□□□□ 0.04
CNOT9-208ENST00000542068 NPLQ9BXD5 320 aaPredicted RBP15.28■□□□□ 0.04
CNOT9-208ENST00000542068 ACTL7AQ9Y615 435 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms