RNA–Protein interactions for RNA: ENST00000541735.5

DMD-228, Transcript of dystrophin, humanhuman

TSL 5 BASIC

Gene DMD, Length 7,080 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DMD-228ENST00000541735 TMEM86AQ8N2M4 240 aa6.31□□□□□ -1.4
DMD-228ENST00000541735 RP9Q8TA86 221 aaKnown RBP6.31□□□□□ -1.4
DMD-228ENST00000541735 GIPC3Q8TF64 312 aa6.31□□□□□ -1.4
DMD-228ENST00000541735 UPF1Q92900 1129 aaKnown RBP eCLIP6.31□□□□□ -1.4
DMD-228ENST00000541735 OLFM3Q96PB7 478 aa6.31□□□□□ -1.4
DMD-228ENST00000541735 KIAA1683Q9H0B3 1180 aa6.31□□□□□ -1.4
DMD-228ENST00000541735 ERVW-1Q9UQF0 538 aa6.31□□□□□ -1.4
DMD-228ENST00000541735 hCG_1807616A0A1W2PRN6 198 aa6.3□□□□□ -1.4
DMD-228ENST00000541735 PLOD3O60568 738 aa6.3□□□□□ -1.4
DMD-228ENST00000541735 ZBTB11O95625 1053 aaPredicted RBP6.3□□□□□ -1.4
DMD-228ENST00000541735 RBL1P28749 1068 aa6.3□□□□□ -1.4
DMD-228ENST00000541735 ARFIP1P53367 373 aa6.3□□□□□ -1.4
DMD-228ENST00000541735 DNASE1L3Q13609 305 aa6.3□□□□□ -1.4
DMD-228ENST00000541735 WDR93Q6P2C0 686 aa6.3□□□□□ -1.4
DMD-228ENST00000541735 ZBTB49Q6ZSB9 765 aa6.3□□□□□ -1.4
DMD-228ENST00000541735 MSANTD1Q6ZTZ1 278 aa6.3□□□□□ -1.4
DMD-228ENST00000541735 KRT74Q7RTS7 529 aa6.3□□□□□ -1.4
DMD-228ENST00000541735 LDB1Q86U70 411 aaPredicted RBP6.3□□□□□ -1.4
DMD-228ENST00000541735 ZBTB46Q86UZ6 589 aa6.3□□□□□ -1.4
DMD-228ENST00000541735 UNC5BQ8IZJ1 945 aa6.3□□□□□ -1.4
DMD-228ENST00000541735 FMR1NBQ8N0W7 255 aaPredicted RBP6.3□□□□□ -1.4
DMD-228ENST00000541735 PCDH20Q8N6Y1 951 aaKnown RBP6.3□□□□□ -1.4
DMD-228ENST00000541735 C12orf76Q8N812 135 aaPredicted RBP6.3□□□□□ -1.4
DMD-228ENST00000541735 CKAP2Q8WWK9 683 aa6.3□□□□□ -1.4
DMD-228ENST00000541735 FAM84AQ96KN4 292 aa6.3□□□□□ -1.4
DMD-228ENST00000541735 EBF3Q9H4W6 596 aa6.3□□□□□ -1.4
DMD-228ENST00000541735 C3orf14Q9HBI5 128 aa6.3□□□□□ -1.4
DMD-228ENST00000541735 DDX4Q9NQI0 724 aaKnown RBP6.3□□□□□ -1.4
DMD-228ENST00000541735 PPP1R14DQ9NXH3 145 aa6.3□□□□□ -1.4
DMD-228ENST00000541735 ZMYM4Q5VZL5 1548 aa6.3□□□□□ -1.4
DMD-228ENST00000541735 H0YGN5 161 aa6.3□□□□□ -1.4
DMD-228ENST00000541735 H3BQ06 376 aaPredicted RBP6.3□□□□□ -1.4
DMD-228ENST00000541735 PSTPIP1O43586 416 aa6.3□□□□□ -1.4
DMD-228ENST00000541735 REM1O75628 298 aa6.3□□□□□ -1.4
DMD-228ENST00000541735 HEXBP07686 556 aa6.3□□□□□ -1.4
DMD-228ENST00000541735 THRAP10827 490 aa6.3□□□□□ -1.4
DMD-228ENST00000541735 HOXB2P14652 356 aa6.3□□□□□ -1.4
DMD-228ENST00000541735 ETS1P14921 441 aa6.3□□□□□ -1.4
DMD-228ENST00000541735 TMEM11P17152 192 aa6.3□□□□□ -1.4
DMD-228ENST00000541735 VARSP26640 1264 aaKnown RBP6.3□□□□□ -1.4
DMD-228ENST00000541735 YAP1P46937 504 aaKnown RBP6.3□□□□□ -1.4
DMD-228ENST00000541735 BLKP51451 505 aa6.3□□□□□ -1.4
DMD-228ENST00000541735 PKNOX1P55347 436 aa6.3□□□□□ -1.4
DMD-228ENST00000541735 C1orf61Q13536 156 aa6.3□□□□□ -1.4
DMD-228ENST00000541735 GIT2Q14161 759 aa6.3□□□□□ -1.4
DMD-228ENST00000541735 NR1D2Q14995 579 aa6.3□□□□□ -1.4
DMD-228ENST00000541735 OASLQ15646 514 aaKnown RBP6.3□□□□□ -1.4
DMD-228ENST00000541735 PYDC2Q56P42 97 aa6.3□□□□□ -1.4
DMD-228ENST00000541735 ARSIQ5FYB1 569 aa6.3□□□□□ -1.4
DMD-228ENST00000541735 SAMD4BQ5PRF9 694 aaKnown RBP6.3□□□□□ -1.4
DMD-228ENST00000541735 DDX59Q5T1V6 619 aaKnown RBP eCLIP6.3□□□□□ -1.4
DMD-228ENST00000541735 CARD17Q5XLA6 110 aa6.3□□□□□ -1.4
DMD-228ENST00000541735 TMEM220Q6QAJ8 160 aa6.3□□□□□ -1.4
DMD-228ENST00000541735 OTOP3Q7RTS5 596 aa6.3□□□□□ -1.4
DMD-228ENST00000541735 GPAT4Q86UL3 456 aa6.3□□□□□ -1.4
DMD-228ENST00000541735 DBF4BQ8NFT6 615 aa6.3□□□□□ -1.4
DMD-228ENST00000541735 MMABQ96EY8 250 aaPredicted RBP6.3□□□□□ -1.4
DMD-228ENST00000541735 SLC38A2Q96QD8 506 aa6.3□□□□□ -1.4
DMD-228ENST00000541735 EBPLQ9BY08 206 aa6.3□□□□□ -1.4
DMD-228ENST00000541735 XRN2Q9H0D6 950 aaKnown RBP eCLIP6.3□□□□□ -1.4
DMD-228ENST00000541735 C17orf75Q9HAS0 396 aa6.3□□□□□ -1.4
DMD-228ENST00000541735 CYP3A43Q9HB55 503 aa6.3□□□□□ -1.4
DMD-228ENST00000541735 FBXL12Q9NXK8 326 aa6.3□□□□□ -1.4
DMD-228ENST00000541735 ANKRD63C9JTQ0 380 aa6.3□□□□□ -1.4
DMD-228ENST00000541735 ATG13O75143 517 aa6.3□□□□□ -1.4
DMD-228ENST00000541735 PRKAR1AP10644 381 aa6.3□□□□□ -1.4
DMD-228ENST00000541735 SPAM1P38567 509 aa6.3□□□□□ -1.4
DMD-228ENST00000541735 NAE1Q13564 534 aa6.3□□□□□ -1.4
DMD-228ENST00000541735 FUT10Q6P4F1 479 aa6.3□□□□□ -1.4
DMD-228ENST00000541735 SIRT2Q8IXJ6 389 aa6.3□□□□□ -1.4
DMD-228ENST00000541735 ZNF808Q8N4W9 903 aaPredicted RBP6.3□□□□□ -1.4
DMD-228ENST00000541735 PTGR2Q8N8N7 351 aaPredicted RBP6.3□□□□□ -1.4
DMD-228ENST00000541735 ZNF606Q8WXB4 792 aa6.3□□□□□ -1.4
DMD-228ENST00000541735 PANX1Q96RD7 426 aa6.3□□□□□ -1.4
DMD-228ENST00000541735 TBCBQ99426 244 aa6.3□□□□□ -1.4
DMD-228ENST00000541735 AIF1LQ9BQI0 150 aa6.3□□□□□ -1.4
DMD-228ENST00000541735 LPIN3Q9BQK8 851 aa6.3□□□□□ -1.4
DMD-228ENST00000541735 MRPL45Q9BRJ2 306 aaKnown RBP6.3□□□□□ -1.4
DMD-228ENST00000541735 COPS4Q9BT78 406 aa6.3□□□□□ -1.4
DMD-228ENST00000541735 TBC1D14Q9P2M4 693 aa6.3□□□□□ -1.4
DMD-228ENST00000541735 OAS3Q9Y6K5 1087 aaKnown RBP6.3□□□□□ -1.4
DMD-228ENST00000541735 TMEM150CB9EJG8 249 aa6.3□□□□□ -1.4
DMD-228ENST00000541735 ZNF823P16415 610 aa6.3□□□□□ -1.4
DMD-228ENST00000541735 CFL1P23528 166 aaKnown RBP6.3□□□□□ -1.4
DMD-228ENST00000541735 TKTP29401 623 aaKnown RBP6.3□□□□□ -1.4
DMD-228ENST00000541735 HOXA7P31268 230 aaPredicted RBP6.3□□□□□ -1.4
DMD-228ENST00000541735 GRB10Q13322 594 aa6.3□□□□□ -1.4
DMD-228ENST00000541735 CTBP1Q13363 440 aa6.3□□□□□ -1.4
DMD-228ENST00000541735 ALX1Q15699 326 aa6.3□□□□□ -1.4
DMD-228ENST00000541735 USP53Q70EK8 1073 aa6.3□□□□□ -1.4
DMD-228ENST00000541735 VSIG10LQ86VR7 867 aa6.3□□□□□ -1.4
DMD-228ENST00000541735 DEFB107AQ8IZN7 70 aa6.3□□□□□ -1.4
DMD-228ENST00000541735 ACTL9Q8TC94 416 aa6.3□□□□□ -1.4
DMD-228ENST00000541735 BORCS8Q96FH0 119 aa6.3□□□□□ -1.4
DMD-228ENST00000541735 TMEM68Q96MH6 324 aa6.3□□□□□ -1.4
DMD-228ENST00000541735 RTFDC1Q9BY42 306 aaPredicted RBP6.3□□□□□ -1.4
DMD-228ENST00000541735 PHTF1Q9UMS5 762 aa6.3□□□□□ -1.4
DMD-228ENST00000541735 SNX10Q9Y5X0 201 aa6.3□□□□□ -1.4
DMD-228ENST00000541735 ACKR2O00590 384 aa6.3□□□□□ -1.4
DMD-228ENST00000541735 SPAG6O75602 509 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms