RNA–Protein interactions for RNA: ENST00000540906.1

AP003559.1-201, humanhuman

TSL 3 BASIC

Gene AP003559.1, Length 1,831 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003559.1-201ENST00000540906 WASF2Q9Y6W5 498 aa12.24□□□□□ -0.45
AP003559.1-201ENST00000540906 KIAA1549LQ6ZVL6 1849 aa12.24□□□□□ -0.45
AP003559.1-201ENST00000540906 TCF20Q9UGU0 1960 aaKnown RBP12.24□□□□□ -0.45
AP003559.1-201ENST00000540906 CXorf51AA0A1B0GTR3 108 aa12.23□□□□□ -0.45
AP003559.1-201ENST00000540906 UBA6A0AVT1 1052 aaPredicted RBP12.23□□□□□ -0.45
AP003559.1-201ENST00000540906 H7C0S8 307 aa12.23□□□□□ -0.45
AP003559.1-201ENST00000540906 DLX3O60479 287 aa12.23□□□□□ -0.45
AP003559.1-201ENST00000540906 UBOX5O94941 541 aa12.23□□□□□ -0.45
AP003559.1-201ENST00000540906 SERPINE1P05121 402 aa12.23□□□□□ -0.45
AP003559.1-201ENST00000540906 DLDP09622 509 aaKnown RBP12.23□□□□□ -0.45
AP003559.1-201ENST00000540906 CCDC166P0CW27 439 aa12.23□□□□□ -0.45
AP003559.1-201ENST00000540906 RALBP11234 206 aa12.23□□□□□ -0.45
AP003559.1-201ENST00000540906 BPIP17213 487 aa12.23□□□□□ -0.45
AP003559.1-201ENST00000540906 HMGCLP35914 325 aa12.23□□□□□ -0.45
AP003559.1-201ENST00000540906 METAP1P53582 386 aa12.23□□□□□ -0.45
AP003559.1-201ENST00000540906 POM121L1PQ3SYA9 428 aa12.23□□□□□ -0.45
AP003559.1-201ENST00000540906 TECRLQ5HYJ1 363 aa12.23□□□□□ -0.45
AP003559.1-201ENST00000540906 PRPF38BQ5VTL8 546 aaKnown RBP12.23□□□□□ -0.45
AP003559.1-201ENST00000540906 ZYG11AQ6WRX3 759 aa12.23□□□□□ -0.45
AP003559.1-201ENST00000540906 TMEM184AQ6ZMB5 413 aa12.23□□□□□ -0.45
AP003559.1-201ENST00000540906 UBXN10Q96LJ8 280 aa12.23□□□□□ -0.45
AP003559.1-201ENST00000540906 FAM161BQ96MY7 647 aa12.23□□□□□ -0.45
AP003559.1-201ENST00000540906 C7orf26Q96N11 449 aa12.23□□□□□ -0.45
AP003559.1-201ENST00000540906 KLHL32Q96NJ5 620 aa12.23□□□□□ -0.45
AP003559.1-201ENST00000540906 RPP25Q9BUL9 199 aaKnown RBP12.23□□□□□ -0.45
AP003559.1-201ENST00000540906 GATA5Q9BWX5 397 aaPredicted RBP12.23□□□□□ -0.45
AP003559.1-201ENST00000540906 SLC2A11Q9BYW1 496 aa12.23□□□□□ -0.45
AP003559.1-201ENST00000540906 ZFYVE1Q9HBF4 777 aa12.23□□□□□ -0.45
AP003559.1-201ENST00000540906 GPAMQ9HCL2 828 aa12.23□□□□□ -0.45
AP003559.1-201ENST00000540906 ZDHHC4Q9NPG8 344 aa12.23□□□□□ -0.45
AP003559.1-201ENST00000540906 PNPOQ9NVS9 261 aa12.23□□□□□ -0.45
AP003559.1-201ENST00000540906 HACD3Q9P035 362 aa12.23□□□□□ -0.45
AP003559.1-201ENST00000540906 PLXNB3Q9ULL4 1909 aa12.23□□□□□ -0.45
AP003559.1-201ENST00000540906 A0A087X1B8 175 aa12.23□□□□□ -0.45
AP003559.1-201ENST00000540906 WASH3PC4AMC7 463 aa12.23□□□□□ -0.45
AP003559.1-201ENST00000540906 H3BMM5 538 aa12.23□□□□□ -0.45
AP003559.1-201ENST00000540906 SOX1O00570 391 aaPredicted RBP12.23□□□□□ -0.45
AP003559.1-201ENST00000540906 TBX10O75333 385 aa12.23□□□□□ -0.45
AP003559.1-201ENST00000540906 POP4O95707 220 aaKnown RBP12.23□□□□□ -0.45
AP003559.1-201ENST00000540906 PMLP29590 882 aa12.23□□□□□ -0.45
AP003559.1-201ENST00000540906 MAPK8P45983 427 aa12.23□□□□□ -0.45
AP003559.1-201ENST00000540906 SLC1A6P48664 564 aa12.23□□□□□ -0.45
AP003559.1-201ENST00000540906 SUOXP51687 545 aa12.23□□□□□ -0.45
AP003559.1-201ENST00000540906 SLC12A2P55011 1212 aa12.23□□□□□ -0.45
AP003559.1-201ENST00000540906 RPL26P61254 145 aaKnown RBP12.23□□□□□ -0.45
AP003559.1-201ENST00000540906 SULT2A1Q06520 285 aa12.23□□□□□ -0.45
AP003559.1-201ENST00000540906 ATG16L1Q676U5 607 aa12.23□□□□□ -0.45
AP003559.1-201ENST00000540906 FAM45BPQ6NSW5 357 aa12.23□□□□□ -0.45
AP003559.1-201ENST00000540906 MAVSQ7Z434 540 aa12.23□□□□□ -0.45
AP003559.1-201ENST00000540906 METTL3Q86U44 580 aaKnown RBP12.23□□□□□ -0.45
AP003559.1-201ENST00000540906 SPATS2Q86XZ4 545 aaKnown RBP12.23□□□□□ -0.45
AP003559.1-201ENST00000540906 TRIM42Q8IWZ5 723 aa12.23□□□□□ -0.45
AP003559.1-201ENST00000540906 PHTF2Q8N3S3 785 aa12.23□□□□□ -0.45
AP003559.1-201ENST00000540906 ANKS4BQ8N8V4 417 aa12.23□□□□□ -0.45
AP003559.1-201ENST00000540906 TXNDC5Q8NBS9 432 aaKnown RBP12.23□□□□□ -0.45
AP003559.1-201ENST00000540906 GIMAP7Q8NHV1 300 aa12.23□□□□□ -0.45
AP003559.1-201ENST00000540906 PPP1R14CQ8TAE6 165 aa12.23□□□□□ -0.45
AP003559.1-201ENST00000540906 RAB3IL1Q8TBN0 382 aa12.23□□□□□ -0.45
AP003559.1-201ENST00000540906 FAM45AQ8TCE6 357 aa12.23□□□□□ -0.45
AP003559.1-201ENST00000540906 PTERQ96BW5 349 aa12.23□□□□□ -0.45
AP003559.1-201ENST00000540906 ERLEC1Q96DZ1 483 aa12.23□□□□□ -0.45
AP003559.1-201ENST00000540906 LRCH3Q96II8 777 aa12.23□□□□□ -0.45
AP003559.1-201ENST00000540906 TUBGCP5Q96RT8 1024 aa12.23□□□□□ -0.45
AP003559.1-201ENST00000540906 KXD1Q9BQD3 176 aa12.23□□□□□ -0.45
AP003559.1-201ENST00000540906 BOCQ9BWV1 1114 aa12.23□□□□□ -0.45
AP003559.1-201ENST00000540906 TMEM120AQ9BXJ8 343 aa12.23□□□□□ -0.45
AP003559.1-201ENST00000540906 CPEB1Q9BZB8 566 aaKnown RBP12.23□□□□□ -0.45
AP003559.1-201ENST00000540906 MYLK2Q9H1R3 596 aa12.23□□□□□ -0.45
AP003559.1-201ENST00000540906 NSUN3Q9H649 340 aaKnown RBP12.23□□□□□ -0.45
AP003559.1-201ENST00000540906 ECT2Q9H8V3 914 aa12.23□□□□□ -0.45
AP003559.1-201ENST00000540906 TRPV4Q9HBA0 871 aa12.23□□□□□ -0.45
AP003559.1-201ENST00000540906 IL26Q9NPH9 171 aa12.23□□□□□ -0.45
AP003559.1-201ENST00000540906 OXSMQ9NWU1 459 aa12.23□□□□□ -0.45
AP003559.1-201ENST00000540906 HCN2Q9UL51 889 aa12.23□□□□□ -0.45
AP003559.1-201ENST00000540906 RPL26L1Q9UNX3 145 aaKnown RBP12.23□□□□□ -0.45
AP003559.1-201ENST00000540906 ATXN2Q99700 1313 aaKnown RBP12.22□□□□□ -0.45
AP003559.1-201ENST00000540906 A0A0G2JND7 137 aa12.22□□□□□ -0.45
AP003559.1-201ENST00000540906 IQCF5A8MTL0 148 aa12.22□□□□□ -0.45
AP003559.1-201ENST00000540906 ZBTB14O43829 449 aa12.22□□□□□ -0.45
AP003559.1-201ENST00000540906 NIPSNAP2O75323 286 aa12.22□□□□□ -0.45
AP003559.1-201ENST00000540906 LEFTY1O75610 366 aa12.22□□□□□ -0.45
AP003559.1-201ENST00000540906 ADH1CP00326 375 aa12.22□□□□□ -0.45
AP003559.1-201ENST00000540906 CHRNGP07510 517 aa12.22□□□□□ -0.45
AP003559.1-201ENST00000540906 C1SP09871 688 aa12.22□□□□□ -0.45
AP003559.1-201ENST00000540906 MYL2P10916 166 aa12.22□□□□□ -0.45
AP003559.1-201ENST00000540906 COL6A2P12110 1019 aa12.22□□□□□ -0.45
AP003559.1-201ENST00000540906 HLA-EP13747 358 aa12.22□□□□□ -0.45
AP003559.1-201ENST00000540906 UGT1A6P19224 532 aa12.22□□□□□ -0.45
AP003559.1-201ENST00000540906 UGT1A1P22309 533 aa12.22□□□□□ -0.45
AP003559.1-201ENST00000540906 UGT1A4P22310 534 aa12.22□□□□□ -0.45
AP003559.1-201ENST00000540906 UGT1A3P35503 534 aa12.22□□□□□ -0.45
AP003559.1-201ENST00000540906 UGT1A5P35504 534 aa12.22□□□□□ -0.45
AP003559.1-201ENST00000540906 ADAM15Q13444 863 aa12.22□□□□□ -0.45
AP003559.1-201ENST00000540906 DBN1Q16643 649 aa12.22□□□□□ -0.45
AP003559.1-201ENST00000540906 LRRC66Q68CR7 880 aa12.22□□□□□ -0.45
AP003559.1-201ENST00000540906 TAS2R42Q7RTR8 314 aa12.22□□□□□ -0.45
AP003559.1-201ENST00000540906 SDCCAG8Q86SQ7 713 aaPredicted RBP12.22□□□□□ -0.45
AP003559.1-201ENST00000540906 PAF1Q8N7H5 531 aa12.22□□□□□ -0.45
AP003559.1-201ENST00000540906 GPR26Q8NDV2 337 aa12.22□□□□□ -0.45
AP003559.1-201ENST00000540906 MCCC1Q96RQ3 725 aaPredicted RBP12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms