RNA–Protein interactions for RNA: ENST00000540562.1

INO80E-203, Transcript of INO80 complex subunit E, humanhuman

TSL 2

Gene INO80E, Length 3,064 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
INO80E-203ENST00000540562 PEX11BO96011 259 aa14.09□□□□□ -0.15
INO80E-203ENST00000540562 RBP1P09455 135 aa14.09□□□□□ -0.15
INO80E-203ENST00000540562 TUSC3Q13454 348 aa14.09□□□□□ -0.15
INO80E-203ENST00000540562 NFYCQ13952 458 aa14.09□□□□□ -0.15
INO80E-203ENST00000540562 TIGD7Q6NT04 549 aaPredicted RBP14.09□□□□□ -0.15
INO80E-203ENST00000540562 PARP8Q8N3A8 854 aa14.09□□□□□ -0.15
INO80E-203ENST00000540562 RNF217Q8TC41 542 aa14.09□□□□□ -0.15
INO80E-203ENST00000540562 EZH1Q92800 747 aaPredicted RBP14.09□□□□□ -0.15
INO80E-203ENST00000540562 MUC3BQ9H195 1237 aa14.09□□□□□ -0.15
INO80E-203ENST00000540562 UPF3AQ9H1J1 476 aaKnown RBP14.09□□□□□ -0.15
INO80E-203ENST00000540562 CCDC68Q9H2F9 335 aa14.09□□□□□ -0.15
INO80E-203ENST00000540562 IRAK4Q9NWZ3 460 aa14.09□□□□□ -0.15
INO80E-203ENST00000540562 ZMYM5Q9UJ78 669 aa14.09□□□□□ -0.15
INO80E-203ENST00000540562 NYNRINQ9P2P1 1898 aaKnown RBP14.08□□□□□ -0.15
INO80E-203ENST00000540562 TSC2P49815 1807 aa14.08□□□□□ -0.16
INO80E-203ENST00000540562 GPR182O15218 404 aa14.08□□□□□ -0.16
INO80E-203ENST00000540562 FGF10O15520 208 aaPredicted RBP14.08□□□□□ -0.16
INO80E-203ENST00000540562 TFPTP0C1Z6 253 aa14.08□□□□□ -0.16
INO80E-203ENST00000540562 KPNA2P52292 529 aaKnown RBP14.08□□□□□ -0.16
INO80E-203ENST00000540562 UFM1P61960 85 aa14.08□□□□□ -0.16
INO80E-203ENST00000540562 RHDQ02161 417 aa14.08□□□□□ -0.16
INO80E-203ENST00000540562 PRKCQQ04759 706 aa14.08□□□□□ -0.16
INO80E-203ENST00000540562 LPIN1Q14693 890 aa14.08□□□□□ -0.16
INO80E-203ENST00000540562 NEDD8Q15843 81 aa14.08□□□□□ -0.16
INO80E-203ENST00000540562 LRRC23Q53EV4 343 aaPredicted RBP14.08□□□□□ -0.16
INO80E-203ENST00000540562 MORN1Q5T089 497 aa14.08□□□□□ -0.16
INO80E-203ENST00000540562 LPCAT2Q7L5N7 544 aa14.08□□□□□ -0.16
INO80E-203ENST00000540562 TAS2R42Q7RTR8 314 aa14.08□□□□□ -0.16
INO80E-203ENST00000540562 CLVS1Q8IUQ0 354 aaPredicted RBP14.08□□□□□ -0.16
INO80E-203ENST00000540562 NSMCE3Q96MG7 304 aa14.08□□□□□ -0.16
INO80E-203ENST00000540562 PPM1MQ96MI6 270 aa14.08□□□□□ -0.16
INO80E-203ENST00000540562 TSGA13Q96PP4 275 aa14.08□□□□□ -0.16
INO80E-203ENST00000540562 HAPLN3Q96S86 360 aa14.08□□□□□ -0.16
INO80E-203ENST00000540562 SLC25A23Q9BV35 468 aa14.08□□□□□ -0.16
INO80E-203ENST00000540562 RRAGCQ9HB90 399 aa14.08□□□□□ -0.16
INO80E-203ENST00000540562 INTS7Q9NVH2 962 aaKnown RBP14.08□□□□□ -0.16
INO80E-203ENST00000540562 FAM8A1Q9UBU6 413 aa14.08□□□□□ -0.16
INO80E-203ENST00000540562 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.08□□□□□ -0.16
INO80E-203ENST00000540562 ZSWIM8A7E2V4 1837 aa14.08□□□□□ -0.16
INO80E-203ENST00000540562 GLTPD2A6NH11 291 aa14.08□□□□□ -0.16
INO80E-203ENST00000540562 TNFRSF10BO14763 440 aa14.08□□□□□ -0.16
INO80E-203ENST00000540562 AZIN1O14977 448 aa14.08□□□□□ -0.16
INO80E-203ENST00000540562 DENRO43583 198 aaKnown RBP14.08□□□□□ -0.16
INO80E-203ENST00000540562 COL6A2P12110 1019 aa14.08□□□□□ -0.16
INO80E-203ENST00000540562 LEPRP48357 1165 aaKnown RBP14.08□□□□□ -0.16
INO80E-203ENST00000540562 CLCN5P51795 746 aa14.08□□□□□ -0.16
INO80E-203ENST00000540562 DUSP4Q13115 394 aa14.08□□□□□ -0.16
INO80E-203ENST00000540562 ACAP2Q15057 778 aa14.08□□□□□ -0.16
INO80E-203ENST00000540562 PTPRNQ16849 979 aa14.08□□□□□ -0.16
INO80E-203ENST00000540562 C11orf91Q3C1V1 193 aa14.08□□□□□ -0.16
INO80E-203ENST00000540562 CTXN3Q4LDR2 81 aa14.08□□□□□ -0.16
INO80E-203ENST00000540562 ZRANB3Q5FWF4 1079 aa14.08□□□□□ -0.16
INO80E-203ENST00000540562 ZC3H15Q8WU90 426 aaKnown RBP14.08□□□□□ -0.16
INO80E-203ENST00000540562 MAELQ96JY0 434 aaKnown RBP14.08□□□□□ -0.16
INO80E-203ENST00000540562 SERPINB11Q96P15 392 aa14.08□□□□□ -0.16
INO80E-203ENST00000540562 MEAF6Q9HAF1 191 aa14.08□□□□□ -0.16
INO80E-203ENST00000540562 VPS45Q9NRW7 570 aa14.08□□□□□ -0.16
INO80E-203ENST00000540562 GKN1Q9NS71 199 aa14.08□□□□□ -0.16
INO80E-203ENST00000540562 POLR3BQ9NW08 1133 aaPredicted RBP14.08□□□□□ -0.16
INO80E-203ENST00000540562 RRN3Q9NYV6 651 aa14.08□□□□□ -0.16
INO80E-203ENST00000540562 POLG2Q9UHN1 485 aa14.08□□□□□ -0.16
INO80E-203ENST00000540562 BCAP29Q9UHQ4 241 aa14.08□□□□□ -0.16
INO80E-203ENST00000540562 EIF2B4Q9UI10 523 aaKnown RBP14.08□□□□□ -0.16
INO80E-203ENST00000540562 RAB26Q9ULW5 256 aa14.08□□□□□ -0.16
INO80E-203ENST00000540562 TDRKHQ9Y2W6 561 aaKnown RBP14.08□□□□□ -0.16
INO80E-203ENST00000540562 EI24O14681 340 aa14.07□□□□□ -0.16
INO80E-203ENST00000540562 FFAR3O14843 346 aa14.07□□□□□ -0.16
INO80E-203ENST00000540562 GPR42O15529 346 aa14.07□□□□□ -0.16
INO80E-203ENST00000540562 PSMD3O43242 534 aa14.07□□□□□ -0.16
INO80E-203ENST00000540562 HTRA2O43464 458 aaPredicted RBP14.07□□□□□ -0.16
INO80E-203ENST00000540562 AKR1A1P14550 325 aa14.07□□□□□ -0.16
INO80E-203ENST00000540562 CD1DP15813 335 aa14.07□□□□□ -0.16
INO80E-203ENST00000540562 IMPDH1P20839 514 aa14.07□□□□□ -0.16
INO80E-203ENST00000540562 IST1P53990 364 aa14.07□□□□□ -0.16
INO80E-203ENST00000540562 KCNA10Q16322 511 aa14.07□□□□□ -0.16
INO80E-203ENST00000540562 PAGE3Q5JUK9 113 aa14.07□□□□□ -0.16
INO80E-203ENST00000540562 TMEM214Q6NUQ4 689 aaKnown RBP14.07□□□□□ -0.16
INO80E-203ENST00000540562 B3GNT6Q6ZMB0 384 aa14.07□□□□□ -0.16
INO80E-203ENST00000540562 LARP4Q71RC2 724 aaKnown RBP eCLIP14.07□□□□□ -0.16
INO80E-203ENST00000540562 MILR1Q7Z6M3 343 aa14.07□□□□□ -0.16
INO80E-203ENST00000540562 LRRC43Q8N309 656 aa14.07□□□□□ -0.16
INO80E-203ENST00000540562 OR52B6Q8NGF0 335 aa14.07□□□□□ -0.16
INO80E-203ENST00000540562 SMOXQ9NWM0 555 aa14.07□□□□□ -0.16
INO80E-203ENST00000540562 EBF1Q9UH73 591 aa14.07□□□□□ -0.16
INO80E-203ENST00000540562 CDC14AQ9UNH5 594 aa14.07□□□□□ -0.16
INO80E-203ENST00000540562 GIT1Q9Y2X7 761 aa14.07□□□□□ -0.16
INO80E-203ENST00000540562 RAD54BQ9Y620 910 aa14.07□□□□□ -0.16
INO80E-203ENST00000540562 IGLV3-25P01717 112 aa14.07□□□□□ -0.16
INO80E-203ENST00000540562 CTPS1P17812 591 aa14.07□□□□□ -0.16
INO80E-203ENST00000540562 CSRP3P50461 194 aa14.07□□□□□ -0.16
INO80E-203ENST00000540562 DGKQP52824 942 aa14.07□□□□□ -0.16
INO80E-203ENST00000540562 MTPNP58546 118 aa14.07□□□□□ -0.16
INO80E-203ENST00000540562 TWF1Q12792 350 aa14.07□□□□□ -0.16
INO80E-203ENST00000540562 FRG1Q14331 258 aaKnown RBP14.07□□□□□ -0.16
INO80E-203ENST00000540562 UGT3A2Q3SY77 523 aa14.07□□□□□ -0.16
INO80E-203ENST00000540562 TTC33Q6PID6 262 aaPredicted RBP14.07□□□□□ -0.16
INO80E-203ENST00000540562 SLC15A3Q8IY34 581 aa14.07□□□□□ -0.16
INO80E-203ENST00000540562 FBXO39Q8N4B4 442 aa14.07□□□□□ -0.16
INO80E-203ENST00000540562 CALML6Q8TD86 181 aa14.07□□□□□ -0.16
INO80E-203ENST00000540562 PBXIP1Q96AQ6 731 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms