RNA–Protein interactions for RNA: ENST00000540166.5

DDB1-217, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 3,906 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-217ENST00000540166 ASPSCR1Q9BZE9 553 aa8.69□□□□□ -1.02
DDB1-217ENST00000540166 NAA50Q9GZZ1 169 aaKnown RBP8.69□□□□□ -1.02
DDB1-217ENST00000540166 POLE4Q9NR33 117 aa8.69□□□□□ -1.02
DDB1-217ENST00000540166 IFT80Q9P2H3 777 aaPredicted RBP8.69□□□□□ -1.02
DDB1-217ENST00000540166 SNX9Q9Y5X1 595 aa8.69□□□□□ -1.02
DDB1-217ENST00000540166 A0A096LPK6 155 aa8.68□□□□□ -1.02
DDB1-217ENST00000540166 PRSS51A0A1B0GVH4 220 aa8.68□□□□□ -1.02
DDB1-217ENST00000540166 WDR27A2RRH5 827 aa8.68□□□□□ -1.02
DDB1-217ENST00000540166 A6NL46 340 aa8.68□□□□□ -1.02
DDB1-217ENST00000540166 KCNU1A8MYU2 1149 aa8.68□□□□□ -1.02
DDB1-217ENST00000540166 E7ENX8 843 aa8.68□□□□□ -1.02
DDB1-217ENST00000540166 HUS1O60921 280 aa8.68□□□□□ -1.02
DDB1-217ENST00000540166 RECQL4O94761 1208 aa8.68□□□□□ -1.02
DDB1-217ENST00000540166 CRYZL1O95825 349 aa8.68□□□□□ -1.02
DDB1-217ENST00000540166 APOA4P06727 396 aa8.68□□□□□ -1.02
DDB1-217ENST00000540166 FGF3P11487 239 aaPredicted RBP8.68□□□□□ -1.02
DDB1-217ENST00000540166 IL9P15248 144 aa8.68□□□□□ -1.02
DDB1-217ENST00000540166 COL9A1P20849 921 aa8.68□□□□□ -1.02
DDB1-217ENST00000540166 ACO1P21399 889 aaKnown RBP8.68□□□□□ -1.02
DDB1-217ENST00000540166 LRPAP1P30533 357 aa8.68□□□□□ -1.02
DDB1-217ENST00000540166 GP5P40197 560 aa8.68□□□□□ -1.02
DDB1-217ENST00000540166 TUSC3Q13454 348 aa8.68□□□□□ -1.02
DDB1-217ENST00000540166 PTPN20Q4JDL3 420 aa8.68□□□□□ -1.02
DDB1-217ENST00000540166 PPM1JQ5JR12 505 aa8.68□□□□□ -1.02
DDB1-217ENST00000540166 ATAD3BQ5T9A4 648 aa8.68□□□□□ -1.02
DDB1-217ENST00000540166 TTC23LQ6PF05 361 aa8.68□□□□□ -1.02
DDB1-217ENST00000540166 CARM1Q86X55 608 aa8.68□□□□□ -1.02
DDB1-217ENST00000540166 SCN4BQ8IWT1 228 aa8.68□□□□□ -1.02
DDB1-217ENST00000540166 SYTL1Q8IYJ3 562 aa8.68□□□□□ -1.02
DDB1-217ENST00000540166 TTC39CQ8N584 583 aa8.68□□□□□ -1.02
DDB1-217ENST00000540166 RXFP2Q8WXD0 754 aa8.68□□□□□ -1.02
DDB1-217ENST00000540166 FAM149B1Q96BN6 582 aa8.68□□□□□ -1.02
DDB1-217ENST00000540166 ZNF486Q96H40 463 aaPredicted RBP8.68□□□□□ -1.02
DDB1-217ENST00000540166 NMRAL1Q9HBL8 299 aa8.68□□□□□ -1.02
DDB1-217ENST00000540166 TMEM216Q9P0N5 145 aa8.68□□□□□ -1.02
DDB1-217ENST00000540166 ANKMY1Q9P2S6 941 aa8.68□□□□□ -1.02
DDB1-217ENST00000540166 CNOT6Q9ULM6 557 aaKnown RBP8.68□□□□□ -1.02
DDB1-217ENST00000540166 RAP2CQ9Y3L5 183 aa8.68□□□□□ -1.02
DDB1-217ENST00000540166 TTLL3Q9Y4R7 772 aa8.68□□□□□ -1.02
DDB1-217ENST00000540166 FAM86C2PA6NEL3 165 aa8.68□□□□□ -1.02
DDB1-217ENST00000540166 ACKR2O00590 384 aa8.68□□□□□ -1.02
DDB1-217ENST00000540166 UBDO15205 165 aa8.68□□□□□ -1.02
DDB1-217ENST00000540166 SULT1C4O75897 302 aa8.68□□□□□ -1.02
DDB1-217ENST00000540166 MYCLP1P12525 358 aaPredicted RBP8.68□□□□□ -1.02
DDB1-217ENST00000540166 CDH1P12830 882 aa8.68□□□□□ -1.02
DDB1-217ENST00000540166 ZNF26P17031 533 aaPredicted RBP8.68□□□□□ -1.02
DDB1-217ENST00000540166 CLK3P49761 638 aaKnown RBP8.68□□□□□ -1.02
DDB1-217ENST00000540166 SLC7A2P52569 658 aa8.68□□□□□ -1.02
DDB1-217ENST00000540166 PRKCQQ04759 706 aa8.68□□□□□ -1.02
DDB1-217ENST00000540166 TMEM198Q66K66 360 aa8.68□□□□□ -1.02
DDB1-217ENST00000540166 FUT10Q6P4F1 479 aa8.68□□□□□ -1.02
DDB1-217ENST00000540166 GK5Q6ZS86 529 aa8.68□□□□□ -1.02
DDB1-217ENST00000540166 Q8N9G6 341 aaPredicted RBP8.68□□□□□ -1.02
DDB1-217ENST00000540166 OR2T34Q8NGX1 318 aa8.68□□□□□ -1.02
DDB1-217ENST00000540166 OR2T3Q8NH03 318 aa8.68□□□□□ -1.02
DDB1-217ENST00000540166 CANT1Q8WVQ1 401 aa8.68□□□□□ -1.02
DDB1-217ENST00000540166 RORBQ92753 470 aa8.68□□□□□ -1.02
DDB1-217ENST00000540166 ACDQ96AP0 544 aa8.68□□□□□ -1.02
DDB1-217ENST00000540166 IGSF21Q96ID5 467 aa8.68□□□□□ -1.02
DDB1-217ENST00000540166 FAR2Q96K12 515 aa8.68□□□□□ -1.02
DDB1-217ENST00000540166 KLHL32Q96NJ5 620 aa8.68□□□□□ -1.02
DDB1-217ENST00000540166 CD320Q9NPF0 282 aa8.68□□□□□ -1.02
DDB1-217ENST00000540166 SMPD3Q9NY59 655 aaPredicted RBP8.68□□□□□ -1.02
DDB1-217ENST00000540166 LIMD1Q9UGP4 676 aa8.68□□□□□ -1.02
DDB1-217ENST00000540166 DSEQ9UL01 958 aa8.68□□□□□ -1.02
DDB1-217ENST00000540166 SLC39A10Q9ULF5 831 aa8.68□□□□□ -1.02
DDB1-217ENST00000540166 MRPS17Q9Y2R5 130 aaKnown RBP8.68□□□□□ -1.02
DDB1-217ENST00000540166 TMX2-CTNND1H3BSU7 103 aa8.68□□□□□ -1.02
DDB1-217ENST00000540166 NRP1O14786 923 aa8.68□□□□□ -1.02
DDB1-217ENST00000540166 OGTO15294 1046 aa8.68□□□□□ -1.02
DDB1-217ENST00000540166 MTSS1O43312 755 aa8.68□□□□□ -1.02
DDB1-217ENST00000540166 CAPGP40121 348 aa8.68□□□□□ -1.02
DDB1-217ENST00000540166 ARL4AP40617 200 aa8.68□□□□□ -1.02
DDB1-217ENST00000540166 ILF2Q12905 390 aaKnown RBP8.68□□□□□ -1.02
DDB1-217ENST00000540166 C15orf59Q2T9L4 293 aaPredicted RBP8.68□□□□□ -1.02
DDB1-217ENST00000540166 EPGNQ6UW88 154 aa8.68□□□□□ -1.02
DDB1-217ENST00000540166 PDZD4Q76G19 769 aaPredicted RBP8.68□□□□□ -1.02
DDB1-217ENST00000540166 PAGE2Q7Z2X7 111 aa8.68□□□□□ -1.02
DDB1-217ENST00000540166 ELMOD2Q8IZ81 293 aa8.68□□□□□ -1.02
DDB1-217ENST00000540166 PAF1Q8N7H5 531 aa8.68□□□□□ -1.02
DDB1-217ENST00000540166 KREMEN2Q8NCW0 462 aa8.68□□□□□ -1.02
DDB1-217ENST00000540166 ABHD11Q8NFV4 315 aa8.68□□□□□ -1.02
DDB1-217ENST00000540166 CSGALNACT1Q8TDX6 532 aa8.68□□□□□ -1.02
DDB1-217ENST00000540166 PROX1Q92786 737 aa8.68□□□□□ -1.02
DDB1-217ENST00000540166 FBXL20Q96IG2 436 aa8.68□□□□□ -1.02
DDB1-217ENST00000540166 SHDQ96IW2 340 aa8.68□□□□□ -1.02
DDB1-217ENST00000540166 ZFP42Q96MM3 310 aa8.68□□□□□ -1.02
DDB1-217ENST00000540166 SEPHS2Q99611 448 aa8.68□□□□□ -1.02
DDB1-217ENST00000540166 PHF7Q9BWX1 381 aaPredicted RBP8.68□□□□□ -1.02
DDB1-217ENST00000540166 C6orf62Q9GZU0 229 aaPredicted RBP8.68□□□□□ -1.02
DDB1-217ENST00000540166 ADAM28Q9UKQ2 775 aa8.68□□□□□ -1.02
DDB1-217ENST00000540166 SERPINI2O75830 405 aa8.67□□□□□ -1.02
DDB1-217ENST00000540166 ASS1P00966 412 aaKnown RBP8.67□□□□□ -1.02
DDB1-217ENST00000540166 UGT2B4P06133 528 aa8.67□□□□□ -1.02
DDB1-217ENST00000540166 DDX5P17844 614 aaKnown RBP8.67□□□□□ -1.02
DDB1-217ENST00000540166 ARF4P18085 180 aaPredicted RBP8.67□□□□□ -1.02
DDB1-217ENST00000540166 CD247P20963 164 aa8.67□□□□□ -1.02
DDB1-217ENST00000540166 IL1R2P27930 398 aa8.67□□□□□ -1.02
DDB1-217ENST00000540166 PSMB9P28065 219 aa8.67□□□□□ -1.02
DDB1-217ENST00000540166 IL12AP29459 219 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms