RNA–Protein interactions for RNA: ENST00000540159.3

BNIP3-202, Transcript of BCL2 interacting protein 3, humanhuman

TSL 1 (best)

Gene BNIP3, Length 3,066 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BNIP3-202ENST00000540159 IKBKEQ14164 716 aa13.63□□□□□ -0.23
BNIP3-202ENST00000540159 TBCELQ5QJ74 424 aa13.63□□□□□ -0.23
BNIP3-202ENST00000540159 RSPO2Q6UXX9 243 aaPredicted RBP13.63□□□□□ -0.23
BNIP3-202ENST00000540159 LARP4Q71RC2 724 aaKnown RBP eCLIP13.63□□□□□ -0.23
BNIP3-202ENST00000540159 TSPAN17Q96FV3 270 aa13.63□□□□□ -0.23
BNIP3-202ENST00000540159 GPR21Q99679 349 aa13.63□□□□□ -0.23
BNIP3-202ENST00000540159 TLR6Q9Y2C9 796 aa13.63□□□□□ -0.23
BNIP3-202ENST00000540159 HOXC8P31273 242 aa13.62□□□□□ -0.23
BNIP3-202ENST00000540159 CYP2C18P33260 490 aa13.62□□□□□ -0.23
BNIP3-202ENST00000540159 RPL5P46777 297 aaKnown RBP13.62□□□□□ -0.23
BNIP3-202ENST00000540159 MGAT3Q09327 533 aa13.62□□□□□ -0.23
BNIP3-202ENST00000540159 MAPRE1Q15691 268 aaKnown RBP13.62□□□□□ -0.23
BNIP3-202ENST00000540159 CPNE9Q8IYJ1 553 aa13.62□□□□□ -0.23
BNIP3-202ENST00000540159 CBR4Q8N4T8 237 aa13.62□□□□□ -0.23
BNIP3-202ENST00000540159 LPCAT1Q8NF37 534 aa13.62□□□□□ -0.23
BNIP3-202ENST00000540159 ADCY4Q8NFM4 1077 aa13.62□□□□□ -0.23
BNIP3-202ENST00000540159 GKN1Q9NS71 199 aa13.62□□□□□ -0.23
BNIP3-202ENST00000540159 MAP10Q9P2G4 905 aa13.62□□□□□ -0.23
BNIP3-202ENST00000540159 RNF103-CHMP3A0A140T963 221 aa13.62□□□□□ -0.23
BNIP3-202ENST00000540159 KATNA1O75449 491 aa13.62□□□□□ -0.23
BNIP3-202ENST00000540159 TNFAIP8O95379 198 aa13.62□□□□□ -0.23
BNIP3-202ENST00000540159 CYP11A1P05108 521 aa13.62□□□□□ -0.23
BNIP3-202ENST00000540159 MTHFD2P13995 350 aa13.62□□□□□ -0.23
BNIP3-202ENST00000540159 ZNF37AP17032 561 aaPredicted RBP13.62□□□□□ -0.23
BNIP3-202ENST00000540159 HOXC13P31276 330 aa13.62□□□□□ -0.23
BNIP3-202ENST00000540159 HERVK_113P63132 956 aa13.62□□□□□ -0.23
BNIP3-202ENST00000540159 RHDQ02161 417 aa13.62□□□□□ -0.23
BNIP3-202ENST00000540159 NADSYN1Q6IA69 706 aa13.62□□□□□ -0.23
BNIP3-202ENST00000540159 SIDT2Q8NBJ9 832 aaKnown RBP13.62□□□□□ -0.23
BNIP3-202ENST00000540159 OR4L1Q8NH43 312 aa13.62□□□□□ -0.23
BNIP3-202ENST00000540159 CYGBQ8WWM9 190 aa13.62□□□□□ -0.23
BNIP3-202ENST00000540159 HIC2Q96JB3 615 aa13.62□□□□□ -0.23
BNIP3-202ENST00000540159 SLC25A23Q9BV35 468 aa13.62□□□□□ -0.23
BNIP3-202ENST00000540159 ERVK-6Q9BXR3 956 aa13.62□□□□□ -0.23
BNIP3-202ENST00000540159 ABCG8Q9H221 673 aa13.62□□□□□ -0.23
BNIP3-202ENST00000540159 CATSPERZQ9NTU4 200 aa13.62□□□□□ -0.23
BNIP3-202ENST00000540159 SMPD4Q9NXE4 827 aa13.62□□□□□ -0.23
BNIP3-202ENST00000540159 MYO7AQ13402 2215 aa13.62□□□□□ -0.23
BNIP3-202ENST00000540159 ZFC3H1O60293 1989 aaKnown RBP13.62□□□□□ -0.23
BNIP3-202ENST00000540159 AZIN1O14977 448 aa13.62□□□□□ -0.23
BNIP3-202ENST00000540159 DENRO43583 198 aaKnown RBP13.62□□□□□ -0.23
BNIP3-202ENST00000540159 TLR5O60602 858 aa13.62□□□□□ -0.23
BNIP3-202ENST00000540159 RHOQP17081 205 aa13.62□□□□□ -0.23
BNIP3-202ENST00000540159 YAP1P46937 504 aaKnown RBP13.62□□□□□ -0.23
BNIP3-202ENST00000540159 DNAJB13P59910 316 aa13.62□□□□□ -0.23
BNIP3-202ENST00000540159 PRKCZQ05513 592 aa13.62□□□□□ -0.23
BNIP3-202ENST00000540159 PPP1R8Q12972 351 aaKnown RBP13.62□□□□□ -0.23
BNIP3-202ENST00000540159 RBBP7Q16576 425 aa13.62□□□□□ -0.23
BNIP3-202ENST00000540159 PTPRNQ16849 979 aa13.62□□□□□ -0.23
BNIP3-202ENST00000540159 TIGD2Q4W5G0 525 aa13.62□□□□□ -0.23
BNIP3-202ENST00000540159 PRSS55Q6UWB4 352 aaPredicted RBP13.62□□□□□ -0.23
BNIP3-202ENST00000540159 CHSY3Q70JA7 882 aa13.62□□□□□ -0.23
BNIP3-202ENST00000540159 TMEM173Q86WV6 379 aaPredicted RBP13.62□□□□□ -0.23
BNIP3-202ENST00000540159 TICAM1Q8IUC6 712 aa13.62□□□□□ -0.23
BNIP3-202ENST00000540159 ZNF786Q8N393 782 aa13.62□□□□□ -0.23
BNIP3-202ENST00000540159 CDYL2Q8N8U2 506 aa13.62□□□□□ -0.23
BNIP3-202ENST00000540159 POLR1EQ9GZS1 481 aaKnown RBP13.62□□□□□ -0.23
BNIP3-202ENST00000540159 CCDC68Q9H2F9 335 aa13.62□□□□□ -0.23
BNIP3-202ENST00000540159 POLG2Q9UHN1 485 aa13.62□□□□□ -0.23
BNIP3-202ENST00000540159 BCAP29Q9UHQ4 241 aa13.62□□□□□ -0.23
BNIP3-202ENST00000540159 TMX2-CTNND1H3BSU7 103 aa13.61□□□□□ -0.23
BNIP3-202ENST00000540159 TRIM24O15164 1050 aa13.61□□□□□ -0.23
BNIP3-202ENST00000540159 HNRNPRO43390 633 aaKnown RBP13.61□□□□□ -0.23
BNIP3-202ENST00000540159 PCNAP12004 261 aa13.61□□□□□ -0.23
BNIP3-202ENST00000540159 SGSHP51688 502 aa13.61□□□□□ -0.23
BNIP3-202ENST00000540159 C17orf99Q6UX52 265 aa13.61□□□□□ -0.23
BNIP3-202ENST00000540159 RALGPS2Q86X27 583 aaPredicted RBP13.61□□□□□ -0.23
BNIP3-202ENST00000540159 PIANPQ8IYJ0 282 aa13.61□□□□□ -0.23
BNIP3-202ENST00000540159 UMODL1-AS1Q8N2C9 162 aa13.61□□□□□ -0.23
BNIP3-202ENST00000540159 SLC39A13Q96H72 371 aa13.61□□□□□ -0.23
BNIP3-202ENST00000540159 TSPAN18Q96SJ8 248 aa13.61□□□□□ -0.23
BNIP3-202ENST00000540159 DCUN1D5Q9BTE7 237 aa13.61□□□□□ -0.23
BNIP3-202ENST00000540159 VCX3AQ9NNX9 186 aa13.61□□□□□ -0.23
BNIP3-202ENST00000540159 PRDM5Q9NQX1 630 aaPredicted RBP13.61□□□□□ -0.23
BNIP3-202ENST00000540159 RAB26Q9ULW5 256 aa13.61□□□□□ -0.23
BNIP3-202ENST00000540159 STAMBPO95630 424 aa13.61□□□□□ -0.23
BNIP3-202ENST00000540159 DNAJB2P25686 324 aa13.61□□□□□ -0.23
BNIP3-202ENST00000540159 XIAPP98170 497 aa13.61□□□□□ -0.23
BNIP3-202ENST00000540159 LAMB3Q13751 1172 aa13.61□□□□□ -0.23
BNIP3-202ENST00000540159 HERC3Q15034 1050 aa13.61□□□□□ -0.23
BNIP3-202ENST00000540159 UGT3A2Q3SY77 523 aa13.61□□□□□ -0.23
BNIP3-202ENST00000540159 ZRANB3Q5FWF4 1079 aa13.61□□□□□ -0.23
BNIP3-202ENST00000540159 PSAPL1Q6NUJ1 521 aa13.61□□□□□ -0.23
BNIP3-202ENST00000540159 MSANTD2Q6P1R3 559 aa13.61□□□□□ -0.23
BNIP3-202ENST00000540159 RNF19BQ6ZMZ0 732 aa13.61□□□□□ -0.23
BNIP3-202ENST00000540159 KIAA0408Q6ZU52 694 aa13.61□□□□□ -0.23
BNIP3-202ENST00000540159 GLT6D1Q7Z4J2 308 aa13.61□□□□□ -0.23
BNIP3-202ENST00000540159 MRPL10Q7Z7H8 261 aaKnown RBP13.61□□□□□ -0.23
BNIP3-202ENST00000540159 DENND1CQ8IV53 801 aa13.61□□□□□ -0.23
BNIP3-202ENST00000540159 CLYBLQ8N0X4 340 aa13.61□□□□□ -0.23
BNIP3-202ENST00000540159 FBXO39Q8N4B4 442 aa13.61□□□□□ -0.23
BNIP3-202ENST00000540159 NAT16Q8N8M0 369 aa13.61□□□□□ -0.23
BNIP3-202ENST00000540159 MFSD1Q9H3U5 465 aa13.61□□□□□ -0.23
BNIP3-202ENST00000540159 GOLGA4Q13439 2230 aaKnown RBP13.61□□□□□ -0.23
BNIP3-202ENST00000540159 SLC7A4O43246 635 aa13.6□□□□□ -0.23
BNIP3-202ENST00000540159 GJB5O95377 273 aa13.6□□□□□ -0.23
BNIP3-202ENST00000540159 GUCA1CO95843 209 aa13.6□□□□□ -0.23
BNIP3-202ENST00000540159 GPX3P22352 226 aa13.6□□□□□ -0.23
BNIP3-202ENST00000540159 SLC6A4P31645 630 aa13.6□□□□□ -0.23
BNIP3-202ENST00000540159 ZNF135P52742 658 aaPredicted RBP13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms