RNA–Protein interactions for RNA: ENST00000539208.5

GNE-204, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 2 BASIC

Gene GNE, Length 2,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-204ENST00000539208 PPP1R3AQ16821 1122 aa17.87■□□□□ 0.45
GNE-204ENST00000539208 TMEM154Q6P9G4 183 aa17.87■□□□□ 0.45
GNE-204ENST00000539208 GK5Q6ZS86 529 aa17.87■□□□□ 0.45
GNE-204ENST00000539208 RYBPQ8N488 228 aaPredicted RBP17.87■□□□□ 0.45
GNE-204ENST00000539208 GDPD5Q8WTR4 605 aa17.87■□□□□ 0.45
GNE-204ENST00000539208 C19orf60Q96EN9 201 aa17.87■□□□□ 0.45
GNE-204ENST00000539208 EXOC2Q96KP1 924 aa17.87■□□□□ 0.45
GNE-204ENST00000539208 CCDC68Q9H2F9 335 aa17.87■□□□□ 0.45
GNE-204ENST00000539208 HIPK3Q9H422 1215 aa17.87■□□□□ 0.45
GNE-204ENST00000539208 GPBP1L1Q9HC44 474 aaPredicted RBP17.87■□□□□ 0.45
GNE-204ENST00000539208 YIPF1Q9Y548 306 aa17.87■□□□□ 0.45
GNE-204ENST00000539208 OAS3Q9Y6K5 1087 aaKnown RBP17.87■□□□□ 0.45
GNE-204ENST00000539208 UBXN8O00124 270 aa17.86■□□□□ 0.45
GNE-204ENST00000539208 PFDN6O15212 129 aa17.86■□□□□ 0.45
GNE-204ENST00000539208 SRP72O76094 671 aaKnown RBP17.86■□□□□ 0.45
GNE-204ENST00000539208 CDK14O94921 469 aa17.86■□□□□ 0.45
GNE-204ENST00000539208 CD160O95971 181 aa17.86■□□□□ 0.45
GNE-204ENST00000539208 SOD2P04179 222 aa17.86■□□□□ 0.45
GNE-204ENST00000539208 PRSS56P0CW18 603 aa17.86■□□□□ 0.45
GNE-204ENST00000539208 FMO4P31512 558 aa17.86■□□□□ 0.45
GNE-204ENST00000539208 RPL26P61254 145 aaKnown RBP17.86■□□□□ 0.45
GNE-204ENST00000539208 ARF5P84085 180 aa17.86■□□□□ 0.45
GNE-204ENST00000539208 RAD51Q06609 339 aa17.86■□□□□ 0.45
GNE-204ENST00000539208 LRP8Q14114 963 aa17.86■□□□□ 0.45
GNE-204ENST00000539208 INO80DQ53TQ3 878 aaPredicted RBP17.86■□□□□ 0.45
GNE-204ENST00000539208 CLEC6AQ6EIG7 209 aa17.86■□□□□ 0.45
GNE-204ENST00000539208 PAQR3Q6TCH7 311 aa17.86■□□□□ 0.45
GNE-204ENST00000539208 DLG3Q92796 817 aa17.86■□□□□ 0.45
GNE-204ENST00000539208 MUC3BQ9H195 1237 aa17.86■□□□□ 0.45
GNE-204ENST00000539208 HACD3Q9P035 362 aa17.86■□□□□ 0.45
GNE-204ENST00000539208 SCOCQ9UIL1 159 aa17.86■□□□□ 0.45
GNE-204ENST00000539208 UBA6A0AVT1 1052 aaPredicted RBP17.86■□□□□ 0.45
GNE-204ENST00000539208 TSPAN3O60637 253 aa17.86■□□□□ 0.45
GNE-204ENST00000539208 FKTNO75072 461 aa17.86■□□□□ 0.45
GNE-204ENST00000539208 SNRPB2P08579 225 aaKnown RBP17.86■□□□□ 0.45
GNE-204ENST00000539208 TTPAP49638 278 aa17.86■□□□□ 0.45
GNE-204ENST00000539208 TAF12Q16514 161 aa17.86■□□□□ 0.45
GNE-204ENST00000539208 PFKFB4Q16877 469 aa17.86■□□□□ 0.45
GNE-204ENST00000539208 AGKQ53H12 422 aa17.86■□□□□ 0.45
GNE-204ENST00000539208 NKAPQ8N5F7 415 aaKnown RBP17.86■□□□□ 0.45
GNE-204ENST00000539208 LPCAT1Q8NF37 534 aa17.86■□□□□ 0.45
GNE-204ENST00000539208 WBP2Q969T9 261 aa17.86■□□□□ 0.45
GNE-204ENST00000539208 BIRC8Q96P09 236 aa17.86■□□□□ 0.45
GNE-204ENST00000539208 SLC25A23Q9BV35 468 aa17.86■□□□□ 0.45
GNE-204ENST00000539208 CACNA2D2Q9NY47 1150 aa17.86■□□□□ 0.45
GNE-204ENST00000539208 PACSIN3Q9UKS6 424 aa17.86■□□□□ 0.45
GNE-204ENST00000539208 PCDHGC4Q9Y5F7 938 aa17.86■□□□□ 0.45
GNE-204ENST00000539208 PCDHGA7Q9Y5G6 932 aa17.86■□□□□ 0.45
GNE-204ENST00000539208 DNAJC15Q9Y5T4 150 aa17.86■□□□□ 0.45
GNE-204ENST00000539208 DPPA5A6NC42 116 aa17.85■□□□□ 0.45
GNE-204ENST00000539208 C2orf78A6NCI8 922 aa17.85■□□□□ 0.45
GNE-204ENST00000539208 H7C0S8 307 aa17.85■□□□□ 0.45
GNE-204ENST00000539208 TRIM38O00635 465 aa17.85■□□□□ 0.45
GNE-204ENST00000539208 ACOT8O14734 319 aa17.85■□□□□ 0.45
GNE-204ENST00000539208 PYGLP06737 847 aa17.85■□□□□ 0.45
GNE-204ENST00000539208 PKNOX1P55347 436 aa17.85■□□□□ 0.45
GNE-204ENST00000539208 CCL23P55773 120 aa17.85■□□□□ 0.45
GNE-204ENST00000539208 PSME3P61289 254 aa17.85■□□□□ 0.45
GNE-204ENST00000539208 MS4A2Q01362 244 aa17.85■□□□□ 0.45
GNE-204ENST00000539208 VEPH1Q14D04 833 aa17.85■□□□□ 0.45
GNE-204ENST00000539208 OGFRL1Q5TC84 451 aaPredicted RBP17.85■□□□□ 0.45
GNE-204ENST00000539208 LPCAT4Q643R3 524 aa17.85■□□□□ 0.45
GNE-204ENST00000539208 NCEH1Q6PIU2 408 aa17.85■□□□□ 0.45
GNE-204ENST00000539208 HACD2Q6Y1H2 254 aa17.85■□□□□ 0.45
GNE-204ENST00000539208 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.85■□□□□ 0.45
GNE-204ENST00000539208 C16orf59Q7L2K0 433 aa17.85■□□□□ 0.45
GNE-204ENST00000539208 PQLC1Q8N2U9 271 aa17.85■□□□□ 0.45
GNE-204ENST00000539208 UNC93B1Q9H1C4 597 aa17.85■□□□□ 0.45
GNE-204ENST00000539208 EIF4E1BA6NMX2 242 aaKnown RBP17.84■□□□□ 0.45
GNE-204ENST00000539208 SYCE1LA8MT33 242 aa17.84■□□□□ 0.45
GNE-204ENST00000539208 FBP2O00757 339 aa17.84■□□□□ 0.45
GNE-204ENST00000539208 AZIN1O14977 448 aa17.84■□□□□ 0.45
GNE-204ENST00000539208 TMCC1O94876 653 aa17.84■□□□□ 0.45
GNE-204ENST00000539208 UPP2O95045 317 aa17.84■□□□□ 0.45
GNE-204ENST00000539208 C1RP00736 705 aa17.84■□□□□ 0.45
GNE-204ENST00000539208 IRF1P10914 325 aa17.84■□□□□ 0.45
GNE-204ENST00000539208 TSPAN8P19075 237 aa17.84■□□□□ 0.45
GNE-204ENST00000539208 CLCN4P51793 760 aa17.84■□□□□ 0.45
GNE-204ENST00000539208 CDH13P55290 713 aa17.84■□□□□ 0.45
GNE-204ENST00000539208 PLD1Q13393 1074 aa17.84■□□□□ 0.45
GNE-204ENST00000539208 TRIP10Q15642 601 aa17.84■□□□□ 0.45
GNE-204ENST00000539208 KANK2Q63ZY3 851 aa17.84■□□□□ 0.45
GNE-204ENST00000539208 ANKRD33Q7Z3H0 272 aa17.84■□□□□ 0.45
GNE-204ENST00000539208 TTC30BQ8N4P2 665 aa17.84■□□□□ 0.45
GNE-204ENST00000539208 USP13Q92995 863 aaPredicted RBP17.84■□□□□ 0.45
GNE-204ENST00000539208 EXT2Q93063 718 aa17.84■□□□□ 0.45
GNE-204ENST00000539208 TMA16Q96EY4 203 aaKnown RBP17.84■□□□□ 0.45
GNE-204ENST00000539208 ZBED2Q9BTP6 218 aa17.84■□□□□ 0.45
GNE-204ENST00000539208 C1QTNF3Q9BXJ4 246 aa17.84■□□□□ 0.45
GNE-204ENST00000539208 GBF1Q92538 1859 aa17.84■□□□□ 0.45
GNE-204ENST00000539208 STX16-NPEPL1H3BU86 382 aa17.84■□□□□ 0.45
GNE-204ENST00000539208 SIX3O95343 332 aaPredicted RBP17.84■□□□□ 0.45
GNE-204ENST00000539208 GFAPP14136 432 aa17.84■□□□□ 0.45
GNE-204ENST00000539208 PEX2P28328 305 aa17.84■□□□□ 0.45
GNE-204ENST00000539208 ADARP55265 1226 aaKnown RBP17.84■□□□□ 0.45
GNE-204ENST00000539208 IRX1P78414 480 aaPredicted RBP17.84■□□□□ 0.45
GNE-204ENST00000539208 TRAF2Q12933 501 aa17.84■□□□□ 0.45
GNE-204ENST00000539208 PTPRNQ16849 979 aa17.84■□□□□ 0.45
GNE-204ENST00000539208 SFT2D3Q587I9 215 aa17.84■□□□□ 0.45
GNE-204ENST00000539208 REP15Q6BDI9 236 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms