RNA–Protein interactions for RNA: ENST00000539097.2

HIF1A-204, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-204ENST00000539097 CAMK1DQ8IU85 385 aa1.07□□□□□ -2.24
HIF1A-204ENST00000539097 SUGP2Q8IX01 1082 aaKnown RBP eCLIP1.07□□□□□ -2.24
HIF1A-204ENST00000539097 RBMXL3Q8N7X1 1067 aaKnown RBP1.07□□□□□ -2.24
HIF1A-204ENST00000539097 PTPMT1Q8WUK0 201 aaPredicted RBP1.07□□□□□ -2.24
HIF1A-204ENST00000539097 LARP4BQ92615 738 aaKnown RBP1.07□□□□□ -2.24
HIF1A-204ENST00000539097 AKAP1Q92667 903 aaKnown RBP eCLIP1.07□□□□□ -2.24
HIF1A-204ENST00000539097 TAAR8Q969N4 342 aa1.07□□□□□ -2.24
HIF1A-204ENST00000539097 CHFRQ96EP1 664 aa1.07□□□□□ -2.24
HIF1A-204ENST00000539097 RADILQ96JH8 1075 aa1.07□□□□□ -2.24
HIF1A-204ENST00000539097 LZTS2Q9BRK4 669 aa1.07□□□□□ -2.24
HIF1A-204ENST00000539097 TRIM2Q9C040 744 aa1.07□□□□□ -2.24
HIF1A-204ENST00000539097 NUAK2Q9H093 628 aa1.07□□□□□ -2.24
HIF1A-204ENST00000539097 MMRN2Q9H8L6 949 aa1.07□□□□□ -2.24
HIF1A-204ENST00000539097 VIPAS39Q9H9C1 493 aa1.07□□□□□ -2.24
HIF1A-204ENST00000539097 EBF2Q9HAK2 575 aa1.07□□□□□ -2.24
HIF1A-204ENST00000539097 CD93Q9NPY3 652 aa1.07□□□□□ -2.24
HIF1A-204ENST00000539097 PNPLA3Q9NST1 481 aa1.07□□□□□ -2.24
HIF1A-204ENST00000539097 ATP8A2Q9NTI2 1148 aa1.07□□□□□ -2.24
HIF1A-204ENST00000539097 PLK2Q9NYY3 685 aa1.07□□□□□ -2.24
HIF1A-204ENST00000539097 VPS28Q9UK41 221 aa1.07□□□□□ -2.24
HIF1A-204ENST00000539097 TSPAN16Q9UKR8 245 aa1.07□□□□□ -2.24
HIF1A-204ENST00000539097 WDR81Q562E7 1941 aa1.07□□□□□ -2.24
HIF1A-204ENST00000539097 LOC105378220A0A1B0GUY1 285 aaPredicted RBP1.07□□□□□ -2.24
HIF1A-204ENST00000539097 FAM237BA0A1B0GVD1 139 aa1.07□□□□□ -2.24
HIF1A-204ENST00000539097 A0A1W2PPQ1 181 aa1.07□□□□□ -2.24
HIF1A-204ENST00000539097 C1orf226A1L170 272 aa1.07□□□□□ -2.24
HIF1A-204ENST00000539097 LINC01548A6NM66 108 aa1.07□□□□□ -2.24
HIF1A-204ENST00000539097 A8MV72 311 aaPredicted RBP1.07□□□□□ -2.24
HIF1A-204ENST00000539097 ADAMDEC1O15204 470 aa1.07□□□□□ -2.24
HIF1A-204ENST00000539097 TP73O15350 636 aa1.07□□□□□ -2.24
HIF1A-204ENST00000539097 SLC7A4O43246 635 aa1.07□□□□□ -2.24
HIF1A-204ENST00000539097 KCNAB3O43448 404 aa1.07□□□□□ -2.24
HIF1A-204ENST00000539097 SPRY3O43610 288 aa1.07□□□□□ -2.24
HIF1A-204ENST00000539097 HTATSF1O43719 755 aaKnown RBP1.07□□□□□ -2.24
HIF1A-204ENST00000539097 TLR2O60603 784 aa1.07□□□□□ -2.24
HIF1A-204ENST00000539097 JRKO75564 520 aa1.07□□□□□ -2.24
HIF1A-204ENST00000539097 SLC25A12O75746 678 aa1.07□□□□□ -2.24
HIF1A-204ENST00000539097 BEST1O76090 585 aa1.07□□□□□ -2.24
HIF1A-204ENST00000539097 WEE2P0C1S8 567 aa1.07□□□□□ -2.24
HIF1A-204ENST00000539097 DAOP14920 347 aa1.07□□□□□ -2.24
HIF1A-204ENST00000539097 ZFXP17010 805 aaPredicted RBP1.07□□□□□ -2.24
HIF1A-204ENST00000539097 ZNF182P17025 639 aaPredicted RBP1.07□□□□□ -2.24
HIF1A-204ENST00000539097 GABRB1P18505 474 aa1.07□□□□□ -2.24
HIF1A-204ENST00000539097 ITGB6P18564 788 aa1.07□□□□□ -2.24
HIF1A-204ENST00000539097 PROZP22891 400 aa1.07□□□□□ -2.24
HIF1A-204ENST00000539097 FCARP24071 287 aa1.07□□□□□ -2.24
HIF1A-204ENST00000539097 TKTP29401 623 aaKnown RBP1.07□□□□□ -2.24
HIF1A-204ENST00000539097 HOXA7P31268 230 aaPredicted RBP1.07□□□□□ -2.24
HIF1A-204ENST00000539097 USP8P40818 1118 aa1.07□□□□□ -2.24
HIF1A-204ENST00000539097 MSH2P43246 934 aa1.07□□□□□ -2.24
HIF1A-204ENST00000539097 IER3P46695 156 aa1.07□□□□□ -2.24
HIF1A-204ENST00000539097 NR2C2P49116 596 aa1.07□□□□□ -2.24
HIF1A-204ENST00000539097 MTHFSP49914 203 aa1.07□□□□□ -2.24
HIF1A-204ENST00000539097 METAP2P50579 478 aaKnown RBP eCLIP1.07□□□□□ -2.24
HIF1A-204ENST00000539097 SNU13P55769 128 aaKnown RBP1.07□□□□□ -2.24
HIF1A-204ENST00000539097 ARHGAP8P85298 464 aa1.07□□□□□ -2.24
HIF1A-204ENST00000539097 MC1RQ01726 317 aa1.07□□□□□ -2.24
HIF1A-204ENST00000539097 ROR2Q01974 943 aaKnown RBP1.07□□□□□ -2.24
HIF1A-204ENST00000539097 SPOCK1Q08629 439 aa1.07□□□□□ -2.24
HIF1A-204ENST00000539097 TNFAIP1Q13829 316 aa1.07□□□□□ -2.24
HIF1A-204ENST00000539097 TEAD2Q15562 447 aa1.07□□□□□ -2.24
HIF1A-204ENST00000539097 BMP2KLQ5H9B9 411 aa1.07□□□□□ -2.24
HIF1A-204ENST00000539097 ARMC4Q5T2S8 1044 aa1.07□□□□□ -2.24
HIF1A-204ENST00000539097 ZKSCAN2Q63HK3 967 aa1.07□□□□□ -2.24
HIF1A-204ENST00000539097 TMEM81Q6P7N7 255 aa1.07□□□□□ -2.24
HIF1A-204ENST00000539097 TEX38Q6PEX7 206 aa1.07□□□□□ -2.24
HIF1A-204ENST00000539097 CADM4Q8NFZ8 388 aa1.07□□□□□ -2.24
HIF1A-204ENST00000539097 OLIG1Q8TAK6 271 aa1.07□□□□□ -2.24
HIF1A-204ENST00000539097 DQX1Q8TE96 717 aaKnown RBP1.07□□□□□ -2.24
HIF1A-204ENST00000539097 NTN5Q8WTR8 489 aaPredicted RBP1.07□□□□□ -2.24
HIF1A-204ENST00000539097 CHURC1Q8WUH1 139 aa1.07□□□□□ -2.24
HIF1A-204ENST00000539097 PSPC1Q8WXF1 523 aaKnown RBP1.07□□□□□ -2.24
HIF1A-204ENST00000539097 PHF21BQ96EK2 531 aa1.07□□□□□ -2.24
HIF1A-204ENST00000539097 MMABQ96EY8 250 aaPredicted RBP1.07□□□□□ -2.24
HIF1A-204ENST00000539097 CCDC43Q96MW1 224 aaKnown RBP1.07□□□□□ -2.24
HIF1A-204ENST00000539097 OR2A14Q96R47 310 aa1.07□□□□□ -2.24
HIF1A-204ENST00000539097 FCRL5Q96RD9 977 aa1.07□□□□□ -2.24
HIF1A-204ENST00000539097 KLHL4Q9C0H6 718 aa1.07□□□□□ -2.24
HIF1A-204ENST00000539097 DEF6Q9H4E7 631 aa1.07□□□□□ -2.24
HIF1A-204ENST00000539097 KLHL31Q9H511 634 aa1.07□□□□□ -2.24
HIF1A-204ENST00000539097 ZWILCHQ9H900 591 aa1.07□□□□□ -2.24
HIF1A-204ENST00000539097 SERINC1Q9NRX5 453 aa1.07□□□□□ -2.24
HIF1A-204ENST00000539097 ASB6Q9NWX5 421 aa1.07□□□□□ -2.24
HIF1A-204ENST00000539097 SLCO1C1Q9NYB5 712 aa1.07□□□□□ -2.24
HIF1A-204ENST00000539097 VPS18Q9P253 973 aa1.07□□□□□ -2.24
HIF1A-204ENST00000539097 ANKMY1Q9P2S6 941 aa1.07□□□□□ -2.24
HIF1A-204ENST00000539097 MGAT4CQ9UBM8 478 aa1.07□□□□□ -2.24
HIF1A-204ENST00000539097 HEY2Q9UBP5 337 aa1.07□□□□□ -2.24
HIF1A-204ENST00000539097 DNAJB9Q9UBS3 223 aa1.07□□□□□ -2.24
HIF1A-204ENST00000539097 ZNF215Q9UL58 517 aaPredicted RBP1.07□□□□□ -2.24
HIF1A-204ENST00000539097 TNFSF13BQ9Y275 285 aa1.07□□□□□ -2.24
HIF1A-204ENST00000539097 ZNF711Q9Y462 761 aa1.07□□□□□ -2.24
HIF1A-204ENST00000539097 SYNJ2O15056 1496 aa1.07□□□□□ -2.24
HIF1A-204ENST00000539097 TRBV5-7A0A0A0MS05 114 aa1.07□□□□□ -2.24
HIF1A-204ENST00000539097 IGHV4-28A0A0C4DH34 117 aa1.07□□□□□ -2.24
HIF1A-204ENST00000539097 ANXA2P2A6NMY6 339 aa1.07□□□□□ -2.24
HIF1A-204ENST00000539097 FOXO6A8MYZ6 492 aa1.07□□□□□ -2.24
HIF1A-204ENST00000539097 CES2O00748 559 aa1.07□□□□□ -2.24
HIF1A-204ENST00000539097 KLK8O60259 260 aa1.07□□□□□ -2.24
HIF1A-204ENST00000539097 HBP1O60381 514 aa1.07□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms