RNA–Protein interactions for RNA: ENST00000538862.6

CDCA3-207, Transcript of cell division cycle associated 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDCA3, Length 1,943 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-207ENST00000538862 AP4S1Q9Y587 144 aa14.54□□□□□ -0.08
CDCA3-207ENST00000538862 PCDHB7Q9Y5E2 793 aa14.54□□□□□ -0.08
CDCA3-207ENST00000538862 IGLV3-10A0A075B6K4 115 aa14.53□□□□□ -0.08
CDCA3-207ENST00000538862 LOC285095A0A1B0GVY8 99 aa14.53□□□□□ -0.08
CDCA3-207ENST00000538862 J3KR12 359 aa14.53□□□□□ -0.08
CDCA3-207ENST00000538862 INPPL1O15357 1258 aa14.53□□□□□ -0.08
CDCA3-207ENST00000538862 NRP2O60462 931 aa14.53□□□□□ -0.08
CDCA3-207ENST00000538862 CLPTM1O96005 669 aa14.53□□□□□ -0.08
CDCA3-207ENST00000538862 ITGB1P05556 798 aa14.53□□□□□ -0.08
CDCA3-207ENST00000538862 LINC00271P0C7V0 271 aa14.53□□□□□ -0.08
CDCA3-207ENST00000538862 TCN1P20061 433 aaPredicted RBP14.53□□□□□ -0.08
CDCA3-207ENST00000538862 PRAMEP78395 509 aa14.53□□□□□ -0.08
CDCA3-207ENST00000538862 LSAMPQ13449 338 aa14.53□□□□□ -0.08
CDCA3-207ENST00000538862 C1QTNF12Q5T7M4 302 aa14.53□□□□□ -0.08
CDCA3-207ENST00000538862 IRAK1BP1Q5VVH5 260 aa14.53□□□□□ -0.08
CDCA3-207ENST00000538862 IL23RQ5VWK5 629 aa14.53□□□□□ -0.08
CDCA3-207ENST00000538862 C8orf82Q6P1X6 216 aaPredicted RBP14.53□□□□□ -0.08
CDCA3-207ENST00000538862 PAOXQ6QHF9 649 aa14.53□□□□□ -0.08
CDCA3-207ENST00000538862 SATL1Q86VE3 508 aa14.53□□□□□ -0.08
CDCA3-207ENST00000538862 NUP93Q8N1F7 819 aa14.53□□□□□ -0.08
CDCA3-207ENST00000538862 FBXO22Q8NEZ5 403 aa14.53□□□□□ -0.08
CDCA3-207ENST00000538862 OR6P1Q8NGX9 317 aa14.53□□□□□ -0.08
CDCA3-207ENST00000538862 HDAC10Q969S8 669 aa14.53□□□□□ -0.08
CDCA3-207ENST00000538862 PRDM6Q9NQX0 595 aa14.53□□□□□ -0.08
CDCA3-207ENST00000538862 CCDC167Q9P0B6 97 aa14.53□□□□□ -0.08
CDCA3-207ENST00000538862 CROTQ9UKG9 612 aa14.53□□□□□ -0.08
CDCA3-207ENST00000538862 PADI4Q9UM07 663 aa14.53□□□□□ -0.08
CDCA3-207ENST00000538862 LZTS1Q9Y250 596 aa14.53□□□□□ -0.08
CDCA3-207ENST00000538862 MTCH2Q9Y6C9 303 aa14.53□□□□□ -0.08
CDCA3-207ENST00000538862 MRPL42Q9Y6G3 142 aaKnown RBP14.53□□□□□ -0.08
CDCA3-207ENST00000538862 BRWD1Q9NSI6 2320 aa14.53□□□□□ -0.08
CDCA3-207ENST00000538862 UBFD1O14562 309 aaKnown RBP14.53□□□□□ -0.08
CDCA3-207ENST00000538862 TFAP2AP05549 437 aa14.53□□□□□ -0.08
CDCA3-207ENST00000538862 FAM58BPP0C7Q3 252 aa14.53□□□□□ -0.08
CDCA3-207ENST00000538862 HAPLN1P10915 354 aaPredicted RBP14.53□□□□□ -0.08
CDCA3-207ENST00000538862 ZNF26P17031 533 aaPredicted RBP14.53□□□□□ -0.08
CDCA3-207ENST00000538862 CTNNB1P35222 781 aa14.53□□□□□ -0.08
CDCA3-207ENST00000538862 PLXNA3P51805 1871 aa14.53□□□□□ -0.08
CDCA3-207ENST00000538862 PLK1P53350 603 aa14.53□□□□□ -0.08
CDCA3-207ENST00000538862 MAXP61244 160 aa14.53□□□□□ -0.08
CDCA3-207ENST00000538862 USP46P62068 366 aa14.53□□□□□ -0.08
CDCA3-207ENST00000538862 HERVK_113P63132 956 aa14.53□□□□□ -0.08
CDCA3-207ENST00000538862 DSC2Q02487 901 aa14.53□□□□□ -0.08
CDCA3-207ENST00000538862 ACVR1Q04771 509 aa14.53□□□□□ -0.08
CDCA3-207ENST00000538862 PPP1R3AQ16821 1122 aa14.53□□□□□ -0.08
CDCA3-207ENST00000538862 MGAT5BQ3V5L5 792 aa14.53□□□□□ -0.08
CDCA3-207ENST00000538862 MS4A13Q5J8X5 152 aa14.53□□□□□ -0.08
CDCA3-207ENST00000538862 SIRPB2Q5JXA9 342 aa14.53□□□□□ -0.08
CDCA3-207ENST00000538862 SAMD4BQ5PRF9 694 aaKnown RBP14.53□□□□□ -0.08
CDCA3-207ENST00000538862 GPR158Q5T848 1215 aa14.53□□□□□ -0.08
CDCA3-207ENST00000538862 TMEM207Q6UWW9 146 aa14.53□□□□□ -0.08
CDCA3-207ENST00000538862 DCP1BQ8IZD4 617 aaKnown RBP14.53□□□□□ -0.08
CDCA3-207ENST00000538862 CLYBLQ8N0X4 340 aa14.53□□□□□ -0.08
CDCA3-207ENST00000538862 ATP6V0D2Q8N8Y2 350 aa14.53□□□□□ -0.08
CDCA3-207ENST00000538862 FAM156AQ8NDB6 213 aa14.53□□□□□ -0.08
CDCA3-207ENST00000538862 GPR150Q8NGU9 434 aa14.53□□□□□ -0.08
CDCA3-207ENST00000538862 ROPN1LQ96C74 230 aa14.53□□□□□ -0.08
CDCA3-207ENST00000538862 FUBP3Q96I24 572 aaKnown RBP eCLIP14.53□□□□□ -0.08
CDCA3-207ENST00000538862 C8orf48Q96LL4 319 aa14.53□□□□□ -0.08
CDCA3-207ENST00000538862 ERVK-6Q9BXR3 956 aa14.53□□□□□ -0.08
CDCA3-207ENST00000538862 ZCWPW1Q9H0M4 648 aa14.53□□□□□ -0.08
CDCA3-207ENST00000538862 TMEM181Q9P2C4 612 aa14.53□□□□□ -0.08
CDCA3-207ENST00000538862 TCRBV3S1A0A5B6 114 aa14.52□□□□□ -0.09
CDCA3-207ENST00000538862 TBKBP1A7MCY6 615 aa14.52□□□□□ -0.09
CDCA3-207ENST00000538862 LDB2O43679 373 aa14.52□□□□□ -0.09
CDCA3-207ENST00000538862 SUPT7LO94864 414 aa14.52□□□□□ -0.09
CDCA3-207ENST00000538862 OAZ2O95190 189 aa14.52□□□□□ -0.09
CDCA3-207ENST00000538862 CSPG5O95196 566 aa14.52□□□□□ -0.09
CDCA3-207ENST00000538862 FGF4P08620 206 aa14.52□□□□□ -0.09
CDCA3-207ENST00000538862 ATXN1LP0C7T5 689 aaKnown RBP14.52□□□□□ -0.09
CDCA3-207ENST00000538862 SLC7A1P30825 629 aa14.52□□□□□ -0.09
CDCA3-207ENST00000538862 ARSDP51689 593 aa14.52□□□□□ -0.09
CDCA3-207ENST00000538862 ATXN3P54252 364 aaPredicted RBP14.52□□□□□ -0.09
CDCA3-207ENST00000538862 CDKN2DP55273 166 aa14.52□□□□□ -0.09
CDCA3-207ENST00000538862 MYBPC1Q00872 1141 aa14.52□□□□□ -0.09
CDCA3-207ENST00000538862 IL10RBQ08334 325 aa14.52□□□□□ -0.09
CDCA3-207ENST00000538862 ADRM1Q16186 407 aa14.52□□□□□ -0.09
CDCA3-207ENST00000538862 SLC39A12Q504Y0 691 aa14.52□□□□□ -0.09
CDCA3-207ENST00000538862 UNC50Q53HI1 259 aa14.52□□□□□ -0.09
CDCA3-207ENST00000538862 ACBD5Q5T8D3 534 aaPredicted RBP14.52□□□□□ -0.09
CDCA3-207ENST00000538862 TFAP2DQ7Z6R9 452 aa14.52□□□□□ -0.09
CDCA3-207ENST00000538862 ARRDC2Q8TBH0 407 aa14.52□□□□□ -0.09
CDCA3-207ENST00000538862 DDI1Q8WTU0 396 aa14.52□□□□□ -0.09
CDCA3-207ENST00000538862 LPGAT1Q92604 370 aa14.52□□□□□ -0.09
CDCA3-207ENST00000538862 ATP6V1E2Q96A05 226 aa14.52□□□□□ -0.09
CDCA3-207ENST00000538862 PABPC5Q96DU9 382 aaKnown RBP14.52□□□□□ -0.09
CDCA3-207ENST00000538862 CNBD2Q96M20 576 aa14.52□□□□□ -0.09
CDCA3-207ENST00000538862 KLHL5Q96PQ7 755 aa14.52□□□□□ -0.09
CDCA3-207ENST00000538862 UHRF1Q96T88 793 aaPredicted RBP14.52□□□□□ -0.09
CDCA3-207ENST00000538862 SLC2A11Q9BYW1 496 aa14.52□□□□□ -0.09
CDCA3-207ENST00000538862 ALG9Q9H6U8 611 aa14.52□□□□□ -0.09
CDCA3-207ENST00000538862 POPDC3Q9HBV1 291 aa14.52□□□□□ -0.09
CDCA3-207ENST00000538862 UXTQ9UBK9 157 aaPredicted RBP14.52□□□□□ -0.09
CDCA3-207ENST00000538862 ATG2AQ2TAZ0 1938 aa14.51□□□□□ -0.09
CDCA3-207ENST00000538862 PRORSD1PA6NEY8 169 aa14.51□□□□□ -0.09
CDCA3-207ENST00000538862 BBIP1A8MTZ0 92 aa14.51□□□□□ -0.09
CDCA3-207ENST00000538862 MRASO14807 208 aa14.51□□□□□ -0.09
CDCA3-207ENST00000538862 SRP72O76094 671 aaKnown RBP14.51□□□□□ -0.09
CDCA3-207ENST00000538862 PGM3O95394 542 aa14.51□□□□□ -0.09
CDCA3-207ENST00000538862 CD1DP15813 335 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms