RNA–Protein interactions for RNA: ENST00000538548.5

SFSWAP-207, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 2,636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-207ENST00000538548 C8orf59Q8N0T1 100 aaPredicted RBP18.56■□□□□ 0.56
SFSWAP-207ENST00000538548 ZFP90Q8TF47 636 aa18.56■□□□□ 0.56
SFSWAP-207ENST00000538548 NDRG1Q92597 394 aaKnown RBP18.56■□□□□ 0.56
SFSWAP-207ENST00000538548 MUL1Q969V5 352 aa18.56■□□□□ 0.56
SFSWAP-207ENST00000538548 EHD1Q9H4M9 534 aa18.56■□□□□ 0.56
SFSWAP-207ENST00000538548 BAG5Q9UL15 447 aa18.56■□□□□ 0.56
SFSWAP-207ENST00000538548 SHROOM3Q8TF72 1996 aa18.56■□□□□ 0.56
SFSWAP-207ENST00000538548 GMNNO75496 209 aa18.56■□□□□ 0.56
SFSWAP-207ENST00000538548 SUPT7LO94864 414 aa18.56■□□□□ 0.56
SFSWAP-207ENST00000538548 LIPEQ05469 1076 aa18.56■□□□□ 0.56
SFSWAP-207ENST00000538548 DAG1Q14118 895 aa18.56■□□□□ 0.56
SFSWAP-207ENST00000538548 POLD3Q15054 466 aaPredicted RBP18.56■□□□□ 0.56
SFSWAP-207ENST00000538548 ACAP2Q15057 778 aa18.56■□□□□ 0.56
SFSWAP-207ENST00000538548 PGS1Q32NB8 556 aa18.56■□□□□ 0.56
SFSWAP-207ENST00000538548 PYCR3Q53H96 274 aa18.56■□□□□ 0.56
SFSWAP-207ENST00000538548 SMG8Q8ND04 991 aaKnown RBP18.56■□□□□ 0.56
SFSWAP-207ENST00000538548 PPHLN1Q8NEY8 458 aaKnown RBP18.56■□□□□ 0.56
SFSWAP-207ENST00000538548 BPIFB1Q8TDL5 484 aa18.56■□□□□ 0.56
SFSWAP-207ENST00000538548 SLC22A17Q8WUG5 538 aa18.56■□□□□ 0.56
SFSWAP-207ENST00000538548 SGCDQ92629 289 aa18.56■□□□□ 0.56
SFSWAP-207ENST00000538548 TRIM8Q9BZR9 551 aa18.56■□□□□ 0.56
SFSWAP-207ENST00000538548 VTA1Q9NP79 307 aa18.56■□□□□ 0.56
SFSWAP-207ENST00000538548 TRPV5Q9NQA5 729 aa18.56■□□□□ 0.56
SFSWAP-207ENST00000538548 SDR39U1Q9NRG7 319 aaPredicted RBP18.56■□□□□ 0.56
SFSWAP-207ENST00000538548 PIGVQ9NUD9 493 aa18.56■□□□□ 0.56
SFSWAP-207ENST00000538548 VPS51Q9UID3 782 aa18.56■□□□□ 0.56
SFSWAP-207ENST00000538548 FBXO5Q9UKT4 447 aa18.56■□□□□ 0.56
SFSWAP-207ENST00000538548 BPTFQ12830 3046 aa18.56■□□□□ 0.56
SFSWAP-207ENST00000538548 PPEF2O14830 753 aa18.55■□□□□ 0.56
SFSWAP-207ENST00000538548 HCRTO43612 131 aa18.55■□□□□ 0.56
SFSWAP-207ENST00000538548 JCHAINP01591 159 aa18.55■□□□□ 0.56
SFSWAP-207ENST00000538548 ALPLP05186 524 aa18.55■□□□□ 0.56
SFSWAP-207ENST00000538548 THRBP10828 461 aa18.55■□□□□ 0.56
SFSWAP-207ENST00000538548 ARF4P18085 180 aaPredicted RBP18.55■□□□□ 0.56
SFSWAP-207ENST00000538548 ADRA1BP35368 520 aa18.55■□□□□ 0.56
SFSWAP-207ENST00000538548 TPTEP56180 551 aa18.55■□□□□ 0.56
SFSWAP-207ENST00000538548 SEMA3BQ13214 749 aa18.55■□□□□ 0.56
SFSWAP-207ENST00000538548 LAMC2Q13753 1193 aa18.55■□□□□ 0.56
SFSWAP-207ENST00000538548 LY6KQ17RY6 165 aa18.55■□□□□ 0.56
SFSWAP-207ENST00000538548 RBM20Q5T481 1227 aaKnown RBP18.55■□□□□ 0.56
SFSWAP-207ENST00000538548 KLHDC8BQ8IXV7 354 aa18.55■□□□□ 0.56
SFSWAP-207ENST00000538548 MFSD4AQ8N468 514 aa18.55■□□□□ 0.56
SFSWAP-207ENST00000538548 WNT8BQ93098 351 aa18.55■□□□□ 0.56
SFSWAP-207ENST00000538548 L3HYPDHQ96EM0 354 aa18.55■□□□□ 0.56
SFSWAP-207ENST00000538548 CYP2S1Q96SQ9 504 aa18.55■□□□□ 0.56
SFSWAP-207ENST00000538548 SEPHS2Q99611 448 aa18.55■□□□□ 0.56
SFSWAP-207ENST00000538548 GPR20Q99678 358 aa18.55■□□□□ 0.56
SFSWAP-207ENST00000538548 DGCR6LQ9BY27 220 aa18.55■□□□□ 0.56
SFSWAP-207ENST00000538548 SPON1Q9HCB6 807 aa18.55■□□□□ 0.56
SFSWAP-207ENST00000538548 DNAJC15Q9Y5T4 150 aa18.55■□□□□ 0.56
SFSWAP-207ENST00000538548 OAS3Q9Y6K5 1087 aaKnown RBP18.55■□□□□ 0.56
SFSWAP-207ENST00000538548 C9JVG2 144 aa18.55■□□□□ 0.56
SFSWAP-207ENST00000538548 UBXN8O00124 270 aa18.55■□□□□ 0.56
SFSWAP-207ENST00000538548 HTR1AP08908 422 aa18.55■□□□□ 0.56
SFSWAP-207ENST00000538548 IL7RP16871 459 aa18.55■□□□□ 0.56
SFSWAP-207ENST00000538548 TSPAN8P19075 237 aa18.55■□□□□ 0.56
SFSWAP-207ENST00000538548 NR4A1P22736 598 aa18.55■□□□□ 0.56
SFSWAP-207ENST00000538548 HCAR3P49019 387 aa18.55■□□□□ 0.56
SFSWAP-207ENST00000538548 HMGCS2P54868 508 aa18.55■□□□□ 0.56
SFSWAP-207ENST00000538548 ADIGQ0VDE8 80 aa18.55■□□□□ 0.56
SFSWAP-207ENST00000538548 CRY1Q16526 586 aa18.55■□□□□ 0.56
SFSWAP-207ENST00000538548 RABL3Q5HYI8 236 aa18.55■□□□□ 0.56
SFSWAP-207ENST00000538548 ZNF678Q5SXM1 525 aa18.55■□□□□ 0.56
SFSWAP-207ENST00000538548 BLOC1S3Q6QNY0 202 aa18.55■□□□□ 0.56
SFSWAP-207ENST00000538548 KIAA0408Q6ZU52 694 aa18.55■□□□□ 0.56
SFSWAP-207ENST00000538548 SNX29P2Q8IUI4 249 aa18.55■□□□□ 0.56
SFSWAP-207ENST00000538548 ZNF280CQ8ND82 737 aa18.55■□□□□ 0.56
SFSWAP-207ENST00000538548 C12orf42Q96LP6 360 aa18.55■□□□□ 0.56
SFSWAP-207ENST00000538548 SLC9A7Q96T83 725 aa18.55■□□□□ 0.56
SFSWAP-207ENST00000538548 TBL1YQ9BQ87 522 aa18.55■□□□□ 0.56
SFSWAP-207ENST00000538548 SLC52A3Q9NQ40 469 aa18.55■□□□□ 0.56
SFSWAP-207ENST00000538548 FBXO8Q9NRD0 319 aa18.55■□□□□ 0.56
SFSWAP-207ENST00000538548 POU2F3Q9UKI9 436 aa18.55■□□□□ 0.56
SFSWAP-207ENST00000538548 PDE10AQ9Y233 779 aa18.55■□□□□ 0.56
SFSWAP-207ENST00000538548 ATP11BQ9Y2G3 1177 aa18.55■□□□□ 0.56
SFSWAP-207ENST00000538548 AAR2Q9Y312 384 aaKnown RBP18.55■□□□□ 0.56
SFSWAP-207ENST00000538548 IFT52Q9Y366 437 aa18.55■□□□□ 0.56
SFSWAP-207ENST00000538548 EVPLQ92817 2033 aa18.55■□□□□ 0.56
SFSWAP-207ENST00000538548 NUP205Q92621 2012 aa18.54■□□□□ 0.56
SFSWAP-207ENST00000538548 AIF1P55008 147 aa18.54■□□□□ 0.56
SFSWAP-207ENST00000538548 NEK10Q6ZWH5 1172 aa18.54■□□□□ 0.56
SFSWAP-207ENST00000538548 OTOP3Q7RTS5 596 aa18.54■□□□□ 0.56
SFSWAP-207ENST00000538548 DNAJB14Q8TBM8 379 aa18.54■□□□□ 0.56
SFSWAP-207ENST00000538548 BIRC7Q96CA5 298 aa18.54■□□□□ 0.56
SFSWAP-207ENST00000538548 BCL7BQ9BQE9 202 aa18.54■□□□□ 0.56
SFSWAP-207ENST00000538548 NTN4Q9HB63 628 aa18.54■□□□□ 0.56
SFSWAP-207ENST00000538548 SCUBE2Q9NQ36 999 aa18.54■□□□□ 0.56
SFSWAP-207ENST00000538548 NRCAMQ92823 1304 aa18.54■□□□□ 0.56
SFSWAP-207ENST00000538548 DEAF1O75398 565 aaPredicted RBP18.54■□□□□ 0.56
SFSWAP-207ENST00000538548 PTPRAP18433 802 aa18.54■□□□□ 0.56
SFSWAP-207ENST00000538548 PAMP19021 973 aa18.54■□□□□ 0.56
SFSWAP-207ENST00000538548 ITIH1P19827 911 aa18.54■□□□□ 0.56
SFSWAP-207ENST00000538548 NFYCQ13952 458 aa18.54■□□□□ 0.56
SFSWAP-207ENST00000538548 TTC23Q5W5X9 447 aa18.54■□□□□ 0.56
SFSWAP-207ENST00000538548 IFNLR1Q8IU57 520 aaPredicted RBP18.54■□□□□ 0.56
SFSWAP-207ENST00000538548 PHYKPLQ8IUZ5 450 aa18.54■□□□□ 0.56
SFSWAP-207ENST00000538548 CRYBG2Q8N1P7 616 aa18.54■□□□□ 0.56
SFSWAP-207ENST00000538548 ZCCHC7Q8N3Z6 543 aaKnown RBP18.54■□□□□ 0.56
SFSWAP-207ENST00000538548 SLC2A14Q8TDB8 520 aa18.54■□□□□ 0.56
SFSWAP-207ENST00000538548 TSPEARQ8WU66 669 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms