RNA–Protein interactions for RNA: ENST00000538291.5

SCARB1-205, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5

Gene SCARB1, Length 5,527 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-205ENST00000538291 PCDHA2Q9Y5H9 948 aa16.8■□□□□ 0.28
SCARB1-205ENST00000538291 CST1P01037 141 aa16.79■□□□□ 0.28
SCARB1-205ENST00000538291 HTR7P34969 479 aa16.79■□□□□ 0.28
SCARB1-205ENST00000538291 NET1Q7Z628 596 aaPredicted RBP16.79■□□□□ 0.28
SCARB1-205ENST00000538291 TNS4Q8IZW8 715 aa16.79■□□□□ 0.28
SCARB1-205ENST00000538291 OR4K2Q8NGD2 314 aa16.79■□□□□ 0.28
SCARB1-205ENST00000538291 SLC9A7Q96T83 725 aa16.79■□□□□ 0.28
SCARB1-205ENST00000538291 POLR3HQ9Y535 204 aaPredicted RBP16.79■□□□□ 0.28
SCARB1-205ENST00000538291 ATXN2Q99700 1313 aaKnown RBP16.79■□□□□ 0.28
SCARB1-205ENST00000538291 LRRC72A6NJI9 287 aa16.79■□□□□ 0.28
SCARB1-205ENST00000538291 TGFB1I1O43294 461 aa16.79■□□□□ 0.28
SCARB1-205ENST00000538291 ZNF37AP17032 561 aaPredicted RBP16.79■□□□□ 0.28
SCARB1-205ENST00000538291 NPAS4Q8IUM7 802 aa16.79■□□□□ 0.28
SCARB1-205ENST00000538291 FLCNQ8NFG4 579 aa16.79■□□□□ 0.28
SCARB1-205ENST00000538291 MPP4Q96JB8 637 aa16.79■□□□□ 0.28
SCARB1-205ENST00000538291 RIPOR3Q96MK2 946 aa16.79■□□□□ 0.28
SCARB1-205ENST00000538291 B3GNT5Q9BYG0 378 aa16.79■□□□□ 0.28
SCARB1-205ENST00000538291 CRISPLD1Q9H336 500 aa16.79■□□□□ 0.28
SCARB1-205ENST00000538291 NECTIN3Q9NQS3 549 aa16.79■□□□□ 0.28
SCARB1-205ENST00000538291 TRPS1Q9UHF7 1281 aa16.79■□□□□ 0.28
SCARB1-205ENST00000538291 MRPS7Q9Y2R9 242 aaKnown RBP16.79■□□□□ 0.28
SCARB1-205ENST00000538291 ATP6AP2A0A1C7CYW4 349 aa16.79■□□□□ 0.28
SCARB1-205ENST00000538291 ATP6AP2O75787 350 aa16.79■□□□□ 0.28
SCARB1-205ENST00000538291 SHBGP04278 402 aa16.79■□□□□ 0.28
SCARB1-205ENST00000538291 ITPKAP23677 461 aa16.79■□□□□ 0.28
SCARB1-205ENST00000538291 ADSLP30566 484 aaPredicted RBP16.79■□□□□ 0.28
SCARB1-205ENST00000538291 CCR3P51677 355 aa16.79■□□□□ 0.28
SCARB1-205ENST00000538291 ILF3Q12906 894 aaKnown RBP eCLIP16.79■□□□□ 0.284e-7■■■■■ 41.2
SCARB1-205ENST00000538291 PDK4Q16654 411 aa16.79■□□□□ 0.28
SCARB1-205ENST00000538291 ZIK1Q3SY52 487 aaPredicted RBP16.79■□□□□ 0.28
SCARB1-205ENST00000538291 FUT10Q6P4F1 479 aa16.79■□□□□ 0.28
SCARB1-205ENST00000538291 HIPK1Q86Z02 1210 aa16.79■□□□□ 0.28
SCARB1-205ENST00000538291 CAPNS2Q96L46 248 aa16.79■□□□□ 0.28
SCARB1-205ENST00000538291 SYN3O14994 580 aa16.79■□□□□ 0.28
SCARB1-205ENST00000538291 SLC22A3O75751 556 aa16.79■□□□□ 0.28
SCARB1-205ENST00000538291 STBD1O95210 358 aa16.79■□□□□ 0.28
SCARB1-205ENST00000538291 NDST3O95803 873 aa16.79■□□□□ 0.28
SCARB1-205ENST00000538291 CYP3A5P20815 502 aa16.79■□□□□ 0.28
SCARB1-205ENST00000538291 ACTR3P61158 418 aa16.79■□□□□ 0.28
SCARB1-205ENST00000538291 FAM98AQ8NCA5 519 aaKnown RBP16.79■□□□□ 0.28
SCARB1-205ENST00000538291 C5orf34Q96MH7 638 aa16.79■□□□□ 0.28
SCARB1-205ENST00000538291 MAF1Q9H063 256 aa16.79■□□□□ 0.28
SCARB1-205ENST00000538291 ZMPSTE24O75844 475 aa16.78■□□□□ 0.28
SCARB1-205ENST00000538291 SLURP2P0DP57 97 aa16.78■□□□□ 0.28
SCARB1-205ENST00000538291 S100GP29377 79 aa16.78■□□□□ 0.28
SCARB1-205ENST00000538291 ADSSP30520 456 aa16.78■□□□□ 0.28
SCARB1-205ENST00000538291 KLHL12Q53G59 568 aa16.78■□□□□ 0.28
SCARB1-205ENST00000538291 FNBP1LQ5T0N5 605 aa16.78■□□□□ 0.28
SCARB1-205ENST00000538291 BROXQ5VW32 411 aa16.78■□□□□ 0.28
SCARB1-205ENST00000538291 FOXR2Q6PJQ5 311 aa16.78■□□□□ 0.28
SCARB1-205ENST00000538291 CXXC5Q7LFL8 322 aaKnown RBP16.78■□□□□ 0.28
SCARB1-205ENST00000538291 DUS2Q9NX74 493 aaKnown RBP16.78■□□□□ 0.28
SCARB1-205ENST00000538291 MDM4O15151 490 aa16.78■□□□□ 0.28
SCARB1-205ENST00000538291 EPHB6O15197 1021 aa16.78■□□□□ 0.28
SCARB1-205ENST00000538291 MYL9P24844 172 aa16.78■□□□□ 0.28
SCARB1-205ENST00000538291 AKT2P31751 481 aa16.78■□□□□ 0.28
SCARB1-205ENST00000538291 SRP54P61011 504 aaKnown RBP16.78■□□□□ 0.28
SCARB1-205ENST00000538291 CYP4F2P78329 520 aa16.78■□□□□ 0.28
SCARB1-205ENST00000538291 TMC5Q6UXY8 1006 aa16.78■□□□□ 0.28
SCARB1-205ENST00000538291 CERS6Q6ZMG9 384 aa16.78■□□□□ 0.28
SCARB1-205ENST00000538291 TMPRSS11BQ86T26 416 aa16.78■□□□□ 0.28
SCARB1-205ENST00000538291 ZNF540Q8NDQ6 660 aa16.78■□□□□ 0.28
SCARB1-205ENST00000538291 TCRBV9S1A1TA0A576 114 aa16.78■□□□□ 0.28
SCARB1-205ENST00000538291 E9PAM4 449 aa16.78■□□□□ 0.28
SCARB1-205ENST00000538291 ALOX15BO15296 676 aa16.78■□□□□ 0.28
SCARB1-205ENST00000538291 CILPO75339 1184 aa16.78■□□□□ 0.28
SCARB1-205ENST00000538291 TRBC1P01850 177 aa16.78■□□□□ 0.28
SCARB1-205ENST00000538291 PTPN2P17706 415 aa16.78■□□□□ 0.28
SCARB1-205ENST00000538291 EPHA3P29320 983 aa16.78■□□□□ 0.28
SCARB1-205ENST00000538291 CERCAMQ5T4B2 595 aa16.78■□□□□ 0.28
SCARB1-205ENST00000538291 ZBTB2Q8N680 514 aa16.78■□□□□ 0.28
SCARB1-205ENST00000538291 AMER2Q8N7J2 671 aa16.78■□□□□ 0.28
SCARB1-205ENST00000538291 NETO2Q8NC67 525 aa16.78■□□□□ 0.28
SCARB1-205ENST00000538291 CSPG4P5Q96PW8 444 aa16.78■□□□□ 0.28
SCARB1-205ENST00000538291 ZDHHC4Q9NPG8 344 aa16.78■□□□□ 0.28
SCARB1-205ENST00000538291 CASZ1Q86V15 1759 aa16.78■□□□□ 0.28
SCARB1-205ENST00000538291 NPEPPSL1A6NEC2 478 aa16.78■□□□□ 0.28
SCARB1-205ENST00000538291 PER2O15055 1255 aa16.78■□□□□ 0.28
SCARB1-205ENST00000538291 RASGRP1O95267 797 aa16.78■□□□□ 0.28
SCARB1-205ENST00000538291 CDH13P55290 713 aa16.78■□□□□ 0.28
SCARB1-205ENST00000538291 PTPN20Q4JDL3 420 aa16.78■□□□□ 0.28
SCARB1-205ENST00000538291 CCNYL2Q5T2Q4 361 aa16.78■□□□□ 0.28
SCARB1-205ENST00000538291 TTC27Q6P3X3 843 aa16.78■□□□□ 0.28
SCARB1-205ENST00000538291 C7orf61Q8IZ16 206 aa16.78■□□□□ 0.28
SCARB1-205ENST00000538291 NEK7Q8TDX7 302 aa16.78■□□□□ 0.28
SCARB1-205ENST00000538291 RNASEH2BQ5TBB1 312 aaKnown RBP16.77■□□□□ 0.28
SCARB1-205ENST00000538291 TAF8Q7Z7C8 310 aa16.77■□□□□ 0.28
SCARB1-205ENST00000538291 DYTNA2CJ06 578 aa16.77■□□□□ 0.28
SCARB1-205ENST00000538291 SNX3O60493 162 aa16.77■□□□□ 0.28
SCARB1-205ENST00000538291 SNAP91O60641 907 aa16.77■□□□□ 0.28
SCARB1-205ENST00000538291 CACNG1Q06432 222 aa16.77■□□□□ 0.28
SCARB1-205ENST00000538291 SEMA5AQ13591 1074 aa16.77■□□□□ 0.28
SCARB1-205ENST00000538291 LIN54Q6MZP7 749 aa16.77■□□□□ 0.28
SCARB1-205ENST00000538291 RHBDF2Q6PJF5 856 aa16.77■□□□□ 0.28
SCARB1-205ENST00000538291 C10orf107Q8IVU9 208 aa16.77■□□□□ 0.28
SCARB1-205ENST00000538291 BRINP2Q9C0B6 783 aa16.77■□□□□ 0.28
SCARB1-205ENST00000538291 TRAF6Q9Y4K3 522 aa16.77■□□□□ 0.28
SCARB1-205ENST00000538291 ROBO3Q96MS0 1386 aa16.77■□□□□ 0.28
SCARB1-205ENST00000538291 MBTD1Q05BQ5 628 aa16.77■□□□□ 0.28
SCARB1-205ENST00000538291 NOMO1Q15155 1222 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms