RNA–Protein interactions for RNA: ENST00000537063.1

UBE3B-207, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 3 BASIC

Gene UBE3B, Length 3,600 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-207ENST00000537063 DHDDSQ86SQ9 333 aa9.28□□□□□ -0.92
UBE3B-207ENST00000537063 MFN1Q8IWA4 741 aa9.28□□□□□ -0.92
UBE3B-207ENST00000537063 CMTR2Q8IYT2 770 aaKnown RBP9.28□□□□□ -0.92
UBE3B-207ENST00000537063 GRIN3AQ8TCU5 1115 aa9.28□□□□□ -0.92
UBE3B-207ENST00000537063 PHF21BQ96EK2 531 aa9.28□□□□□ -0.92
UBE3B-207ENST00000537063 EXOC2Q96KP1 924 aa9.28□□□□□ -0.92
UBE3B-207ENST00000537063 ZNF184Q99676 751 aaPredicted RBP9.28□□□□□ -0.92
UBE3B-207ENST00000537063 FEM1AQ9BSK4 669 aa9.28□□□□□ -0.92
UBE3B-207ENST00000537063 MUC3BQ9H195 1237 aa9.28□□□□□ -0.92
UBE3B-207ENST00000537063 SYTL2Q9HCH5 934 aa9.28□□□□□ -0.92
UBE3B-207ENST00000537063 HACD3Q9P035 362 aa9.28□□□□□ -0.92
UBE3B-207ENST00000537063 MAP3K7O43318 606 aa9.28□□□□□ -0.92
UBE3B-207ENST00000537063 TSPAN3O60637 253 aa9.28□□□□□ -0.92
UBE3B-207ENST00000537063 TSPAN12O95859 305 aa9.28□□□□□ -0.92
UBE3B-207ENST00000537063 IRF1P10914 325 aa9.28□□□□□ -0.92
UBE3B-207ENST00000537063 LAG3P18627 525 aa9.28□□□□□ -0.92
UBE3B-207ENST00000537063 PLK1P53350 603 aa9.28□□□□□ -0.92
UBE3B-207ENST00000537063 ATP6V0D1P61421 351 aa9.28□□□□□ -0.92
UBE3B-207ENST00000537063 ZXDBP98169 803 aa9.28□□□□□ -0.92
UBE3B-207ENST00000537063 CTSL3PQ5NE16 218 aa9.28□□□□□ -0.92
UBE3B-207ENST00000537063 BNC2Q6ZN30 1099 aaPredicted RBP9.28□□□□□ -0.92
UBE3B-207ENST00000537063 C16orf59Q7L2K0 433 aa9.28□□□□□ -0.92
UBE3B-207ENST00000537063 DCAF4L2Q8NA75 395 aa9.28□□□□□ -0.92
UBE3B-207ENST00000537063 LPCAT1Q8NF37 534 aa9.28□□□□□ -0.92
UBE3B-207ENST00000537063 ZDHHC7Q9NXF8 308 aa9.28□□□□□ -0.92
UBE3B-207ENST00000537063 TAS2R13Q9NYV9 303 aa9.28□□□□□ -0.92
UBE3B-207ENST00000537063 IKZF3Q9UKT9 509 aa9.28□□□□□ -0.92
UBE3B-207ENST00000537063 COMMD10Q9Y6G5 202 aa9.28□□□□□ -0.92
UBE3B-207ENST00000537063 CXorf51AA0A1B0GTR3 108 aa9.27□□□□□ -0.92
UBE3B-207ENST00000537063 ABHD14A-ACY1A0A1B0GW23 586 aa9.27□□□□□ -0.92
UBE3B-207ENST00000537063 SNAP91O60641 907 aa9.27□□□□□ -0.92
UBE3B-207ENST00000537063 SLC4A1P02730 911 aa9.27□□□□□ -0.92
UBE3B-207ENST00000537063 DPP6P42658 865 aa9.27□□□□□ -0.92
UBE3B-207ENST00000537063 XIAPP98170 497 aa9.27□□□□□ -0.92
UBE3B-207ENST00000537063 PDAP1Q13442 181 aaKnown RBP9.27□□□□□ -0.92
UBE3B-207ENST00000537063 ZRSR2Q15696 482 aaKnown RBP9.27□□□□□ -0.92
UBE3B-207ENST00000537063 NXNQ6DKJ4 435 aa9.27□□□□□ -0.92
UBE3B-207ENST00000537063 C8orf82Q6P1X6 216 aaPredicted RBP9.27□□□□□ -0.92
UBE3B-207ENST00000537063 PTGR2Q8N8N7 351 aaPredicted RBP9.27□□□□□ -0.92
UBE3B-207ENST00000537063 PPFIBP2Q8ND30 876 aa9.27□□□□□ -0.92
UBE3B-207ENST00000537063 RMDN1Q96DB5 314 aa9.27□□□□□ -0.92
UBE3B-207ENST00000537063 MARK4Q96L34 752 aa9.27□□□□□ -0.92
UBE3B-207ENST00000537063 SLC22A12Q96S37 553 aa9.27□□□□□ -0.92
UBE3B-207ENST00000537063 SERPINI1Q99574 410 aa9.27□□□□□ -0.92
UBE3B-207ENST00000537063 AIM2O14862 343 aa9.27□□□□□ -0.93
UBE3B-207ENST00000537063 TBL1XO60907 577 aa9.27□□□□□ -0.93
UBE3B-207ENST00000537063 CDK14O94921 469 aa9.27□□□□□ -0.93
UBE3B-207ENST00000537063 RPS17P08708 135 aaKnown RBP9.27□□□□□ -0.93
UBE3B-207ENST00000537063 MBL2P11226 248 aaPredicted RBP9.27□□□□□ -0.93
UBE3B-207ENST00000537063 MZF1P28698 734 aaPredicted RBP9.27□□□□□ -0.93
UBE3B-207ENST00000537063 PMLP29590 882 aa9.27□□□□□ -0.93
UBE3B-207ENST00000537063 MRPL19P49406 292 aaKnown RBP9.27□□□□□ -0.93
UBE3B-207ENST00000537063 TTPAP49638 278 aa9.27□□□□□ -0.93
UBE3B-207ENST00000537063 ACADVLP49748 655 aa9.27□□□□□ -0.93
UBE3B-207ENST00000537063 EPHB3P54753 998 aa9.27□□□□□ -0.93
UBE3B-207ENST00000537063 SH3BP2P78314 561 aa9.27□□□□□ -0.93
UBE3B-207ENST00000537063 IRX1P78414 480 aaPredicted RBP9.27□□□□□ -0.93
UBE3B-207ENST00000537063 SMAD3P84022 425 aaKnown RBP9.27□□□□□ -0.93
UBE3B-207ENST00000537063 IRGCQ6NXR0 463 aa9.27□□□□□ -0.93
UBE3B-207ENST00000537063 HACD2Q6Y1H2 254 aa9.27□□□□□ -0.93
UBE3B-207ENST00000537063 PHYKPLQ8IUZ5 450 aa9.27□□□□□ -0.93
UBE3B-207ENST00000537063 PIANPQ8IYJ0 282 aa9.27□□□□□ -0.93
UBE3B-207ENST00000537063 TMEM169Q96HH4 297 aa9.27□□□□□ -0.93
UBE3B-207ENST00000537063 SMIM14Q96QK8 99 aa9.27□□□□□ -0.93
UBE3B-207ENST00000537063 CYP2S1Q96SQ9 504 aa9.27□□□□□ -0.93
UBE3B-207ENST00000537063 P2RY12Q9H244 342 aa9.27□□□□□ -0.93
UBE3B-207ENST00000537063 EFCAB1Q9HAE3 211 aa9.27□□□□□ -0.93
UBE3B-207ENST00000537063 PCDHGC4Q9Y5F7 938 aa9.27□□□□□ -0.93
UBE3B-207ENST00000537063 STX16-NPEPL1H3BU86 382 aa9.27□□□□□ -0.93
UBE3B-207ENST00000537063 UBXN8O00124 270 aa9.27□□□□□ -0.93
UBE3B-207ENST00000537063 STX16O14662 325 aa9.27□□□□□ -0.93
UBE3B-207ENST00000537063 SKAP2O75563 359 aaPredicted RBP9.27□□□□□ -0.93
UBE3B-207ENST00000537063 URODP06132 367 aa9.27□□□□□ -0.93
UBE3B-207ENST00000537063 CSNK1DP48730 415 aa9.27□□□□□ -0.93
UBE3B-207ENST00000537063 THOP1P52888 689 aa9.27□□□□□ -0.93
UBE3B-207ENST00000537063 ATN1P54259 1190 aaPredicted RBP9.27□□□□□ -0.93
UBE3B-207ENST00000537063 AP1S1P61966 158 aa9.27□□□□□ -0.93
UBE3B-207ENST00000537063 CEACAM7Q14002 265 aa9.27□□□□□ -0.93
UBE3B-207ENST00000537063 MAPRE2Q15555 327 aa9.27□□□□□ -0.93
UBE3B-207ENST00000537063 TCHHL1Q5QJ38 904 aaPredicted RBP9.27□□□□□ -0.93
UBE3B-207ENST00000537063 PSAPL1Q6NUJ1 521 aa9.27□□□□□ -0.93
UBE3B-207ENST00000537063 PAQR3Q6TCH7 311 aa9.27□□□□□ -0.93
UBE3B-207ENST00000537063 CLYBLQ8N0X4 340 aa9.27□□□□□ -0.93
UBE3B-207ENST00000537063 WFDC5Q8TCV5 224 aa9.27□□□□□ -0.93
UBE3B-207ENST00000537063 LRRC3Q9BY71 257 aa9.27□□□□□ -0.93
UBE3B-207ENST00000537063 WDR41Q9HAD4 459 aa9.27□□□□□ -0.93
UBE3B-207ENST00000537063 SPG21Q9NZD8 308 aa9.27□□□□□ -0.93
UBE3B-207ENST00000537063 VPS51Q9UID3 782 aa9.27□□□□□ -0.93
UBE3B-207ENST00000537063 FKBPLQ9UIM3 349 aa9.27□□□□□ -0.93
UBE3B-207ENST00000537063 TMCO1Q9UM00 188 aa9.27□□□□□ -0.93
UBE3B-207ENST00000537063 UBDO15205 165 aa9.26□□□□□ -0.93
UBE3B-207ENST00000537063 SMNDC1O75940 238 aaKnown RBP eCLIP9.26□□□□□ -0.93
UBE3B-207ENST00000537063 RHOBTB1O94844 696 aa9.26□□□□□ -0.93
UBE3B-207ENST00000537063 RAD51Q06609 339 aa9.26□□□□□ -0.93
UBE3B-207ENST00000537063 PPP1R3AQ16821 1122 aa9.26□□□□□ -0.93
UBE3B-207ENST00000537063 ITIH5Q86UX2 942 aa9.26□□□□□ -0.93
UBE3B-207ENST00000537063 CPXM2Q8N436 756 aa9.26□□□□□ -0.93
UBE3B-207ENST00000537063 NKAPQ8N5F7 415 aaKnown RBP9.26□□□□□ -0.93
UBE3B-207ENST00000537063 STAG3L4Q8TBR4 150 aa9.26□□□□□ -0.93
UBE3B-207ENST00000537063 CD200R1Q8TD46 325 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms