RNA–Protein interactions for RNA: ENST00000536782.2

TNFRSF1B-204, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1B, Length 557 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-204ENST00000536782 NAV2Q8IVL1 2488 aa19.62■□□□□ 0.73
TNFRSF1B-204ENST00000536782 A0A1W2PQJ5 194 aa19.61■□□□□ 0.73
TNFRSF1B-204ENST00000536782 PDHA1P08559 390 aa19.61■□□□□ 0.73
TNFRSF1B-204ENST00000536782 ADCY8P40145 1251 aa19.61■□□□□ 0.73
TNFRSF1B-204ENST00000536782 SSR1P43307 286 aaKnown RBP19.61■□□□□ 0.73
TNFRSF1B-204ENST00000536782 GPR3P46089 330 aa19.61■□□□□ 0.73
TNFRSF1B-204ENST00000536782 C16orf72Q14CZ0 275 aa19.61■□□□□ 0.73
TNFRSF1B-204ENST00000536782 MANEAQ5SRI9 462 aa19.61■□□□□ 0.73
TNFRSF1B-204ENST00000536782 LRRC66Q68CR7 880 aa19.61■□□□□ 0.73
TNFRSF1B-204ENST00000536782 DOK6Q6PKX4 331 aa19.61■□□□□ 0.73
TNFRSF1B-204ENST00000536782 ZFAND4Q86XD8 727 aa19.61■□□□□ 0.73
TNFRSF1B-204ENST00000536782 NAGSQ8N159 534 aa19.61■□□□□ 0.73
TNFRSF1B-204ENST00000536782 AP2M1Q96CW1 435 aa19.61■□□□□ 0.73
TNFRSF1B-204ENST00000536782 B3GNT4Q9C0J1 378 aa19.61■□□□□ 0.73
TNFRSF1B-204ENST00000536782 POLR1EQ9GZS1 481 aaKnown RBP19.61■□□□□ 0.73
TNFRSF1B-204ENST00000536782 CDH19Q9H159 772 aa19.61■□□□□ 0.73
TNFRSF1B-204ENST00000536782 CD84Q9UIB8 345 aa19.61■□□□□ 0.73
TNFRSF1B-204ENST00000536782 ST14Q9Y5Y6 855 aa19.61■□□□□ 0.73
TNFRSF1B-204ENST00000536782 HECTD1Q9ULT8 2610 aa19.61■□□□□ 0.73
TNFRSF1B-204ENST00000536782 BSNQ9UPA5 3926 aa19.6■□□□□ 0.73
TNFRSF1B-204ENST00000536782 A0A0U1RQS6 177 aa19.6■□□□□ 0.73
TNFRSF1B-204ENST00000536782 C9orf172C9J069 976 aa19.6■□□□□ 0.73
TNFRSF1B-204ENST00000536782 MYO1FO00160 1098 aa19.6■□□□□ 0.73
TNFRSF1B-204ENST00000536782 HGSO14964 777 aaPredicted RBP19.6■□□□□ 0.73
TNFRSF1B-204ENST00000536782 FZD6O60353 706 aa19.6■□□□□ 0.73
TNFRSF1B-204ENST00000536782 SERPING1P05155 500 aa19.6■□□□□ 0.73
TNFRSF1B-204ENST00000536782 CYP1A2P05177 515 aa19.6■□□□□ 0.73
TNFRSF1B-204ENST00000536782 ZNF30P17039 623 aa19.6■□□□□ 0.73
TNFRSF1B-204ENST00000536782 IL4RP24394 825 aa19.6■□□□□ 0.73
TNFRSF1B-204ENST00000536782 CD82P27701 267 aa19.6■□□□□ 0.73
TNFRSF1B-204ENST00000536782 MMRN1Q13201 1228 aa19.6■□□□□ 0.73
TNFRSF1B-204ENST00000536782 SRSF6Q13247 344 aaKnown RBP19.6■□□□□ 0.73
TNFRSF1B-204ENST00000536782 IQCB1Q15051 598 aa19.6■□□□□ 0.73
TNFRSF1B-204ENST00000536782 HADHQ16836 314 aaKnown RBP19.6■□□□□ 0.73
TNFRSF1B-204ENST00000536782 CCDC122Q5T0U0 273 aa19.6■□□□□ 0.73
TNFRSF1B-204ENST00000536782 CAVIN1Q6NZI2 390 aaKnown RBP19.6■□□□□ 0.73
TNFRSF1B-204ENST00000536782 ADAMTSL4Q6UY14 1074 aa19.6■□□□□ 0.73
TNFRSF1B-204ENST00000536782 FAM71BQ8TC56 605 aa19.6■□□□□ 0.73
TNFRSF1B-204ENST00000536782 PATE1Q8WXA2 126 aa19.6■□□□□ 0.73
TNFRSF1B-204ENST00000536782 SCARF2Q96GP6 870 aaPredicted RBP19.6■□□□□ 0.73
TNFRSF1B-204ENST00000536782 NUDT22Q9BRQ3 303 aa19.6■□□□□ 0.73
TNFRSF1B-204ENST00000536782 ABCG8Q9H221 673 aa19.6■□□□□ 0.73
TNFRSF1B-204ENST00000536782 IGHV5-10-1A0A0J9YXX1 117 aa19.59■□□□□ 0.73
TNFRSF1B-204ENST00000536782 A0A0J9YYE9 177 aa19.59■□□□□ 0.73
TNFRSF1B-204ENST00000536782 MFSD11O43934 449 aa19.59■□□□□ 0.73
TNFRSF1B-204ENST00000536782 SOD1P00441 154 aa19.59■□□□□ 0.73
TNFRSF1B-204ENST00000536782 TRBC1P01850 177 aa19.59■□□□□ 0.73
TNFRSF1B-204ENST00000536782 PYGLP06737 847 aa19.59■□□□□ 0.73
TNFRSF1B-204ENST00000536782 CD48P09326 243 aa19.59■□□□□ 0.73
TNFRSF1B-204ENST00000536782 CES1P23141 567 aa19.59■□□□□ 0.73
TNFRSF1B-204ENST00000536782 CD1CP29017 333 aa19.59■□□□□ 0.73
TNFRSF1B-204ENST00000536782 GARSP41250 739 aaKnown RBP19.59■□□□□ 0.73
TNFRSF1B-204ENST00000536782 ACTR1BP42025 376 aa19.59■□□□□ 0.73
TNFRSF1B-204ENST00000536782 EPHB1P54762 984 aa19.59■□□□□ 0.73
TNFRSF1B-204ENST00000536782 ACTR1AP61163 376 aa19.59■□□□□ 0.73
TNFRSF1B-204ENST00000536782 PTSQ03393 145 aa19.59■□□□□ 0.73
TNFRSF1B-204ENST00000536782 NFKBIBQ15653 356 aa19.59■□□□□ 0.73
TNFRSF1B-204ENST00000536782 TIGD7Q6NT04 549 aaPredicted RBP19.59■□□□□ 0.73
TNFRSF1B-204ENST00000536782 ZNF574Q6ZN55 896 aaPredicted RBP19.59■□□□□ 0.73
TNFRSF1B-204ENST00000536782 RFLNAQ6ZTI6 216 aa19.59■□□□□ 0.73
TNFRSF1B-204ENST00000536782 ZNF765Q7L2R6 523 aa19.59■□□□□ 0.73
TNFRSF1B-204ENST00000536782 NLRP8Q86W28 1048 aa19.59■□□□□ 0.73
TNFRSF1B-204ENST00000536782 DTX1Q86Y01 620 aa19.59■□□□□ 0.73
TNFRSF1B-204ENST00000536782 ZSCAN1Q8NBB4 408 aa19.59■□□□□ 0.73
TNFRSF1B-204ENST00000536782 SCAMP4Q969E2 229 aa19.59■□□□□ 0.73
TNFRSF1B-204ENST00000536782 OR2M4Q96R27 311 aa19.59■□□□□ 0.73
TNFRSF1B-204ENST00000536782 HAUS2Q9NVX0 235 aa19.59■□□□□ 0.73
TNFRSF1B-204ENST00000536782 TMEM98Q9Y2Y6 226 aa19.59■□□□□ 0.73
TNFRSF1B-204ENST00000536782 ZFC3H1O60293 1989 aaKnown RBP19.59■□□□□ 0.73
TNFRSF1B-204ENST00000536782 A0A087X0T9 212 aa19.58■□□□□ 0.72
TNFRSF1B-204ENST00000536782 PPM1DO15297 605 aa19.58■□□□□ 0.72
TNFRSF1B-204ENST00000536782 ITGB2P05107 769 aa19.58■□□□□ 0.72
TNFRSF1B-204ENST00000536782 FAM228BP0C875 321 aa19.58■□□□□ 0.72
TNFRSF1B-204ENST00000536782 CCL4P13236 92 aa19.58■□□□□ 0.72
TNFRSF1B-204ENST00000536782 TPM4P67936 248 aa19.58■□□□□ 0.72
TNFRSF1B-204ENST00000536782 GALNT2Q10471 571 aa19.58■□□□□ 0.72
TNFRSF1B-204ENST00000536782 TRA2AQ13595 282 aaKnown RBP eCLIP19.58■□□□□ 0.72
TNFRSF1B-204ENST00000536782 PAFAH1B3Q15102 231 aaKnown RBP19.58■□□□□ 0.72
TNFRSF1B-204ENST00000536782 LINC00303Q3SY05 128 aa19.58■□□□□ 0.72
TNFRSF1B-204ENST00000536782 ALG1LQ6GMV1 187 aa19.58■□□□□ 0.72
TNFRSF1B-204ENST00000536782 XKR5Q6UX68 686 aa19.58■□□□□ 0.72
TNFRSF1B-204ENST00000536782 VASH2Q86V25 355 aa19.58■□□□□ 0.72
TNFRSF1B-204ENST00000536782 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP19.58■□□□□ 0.72
TNFRSF1B-204ENST00000536782 RCBTB1Q8NDN9 531 aa19.58■□□□□ 0.72
TNFRSF1B-204ENST00000536782 CCDC74BQ96LY2 380 aa19.58■□□□□ 0.72
TNFRSF1B-204ENST00000536782 SMIM14Q96QK8 99 aa19.58■□□□□ 0.72
TNFRSF1B-204ENST00000536782 ARHGAP9Q9BRR9 750 aa19.58■□□□□ 0.72
TNFRSF1B-204ENST00000536782 DNPEPQ9ULA0 475 aa19.58■□□□□ 0.72
TNFRSF1B-204ENST00000536782 PLEKHM1Q9Y4G2 1056 aa19.58■□□□□ 0.72
TNFRSF1B-204ENST00000536782 SDK2Q58EX2 2172 aa19.57■□□□□ 0.72
TNFRSF1B-204ENST00000536782 PTPN13Q12923 2485 aa19.57■□□□□ 0.72
TNFRSF1B-204ENST00000536782 IQCJ-SCHIP1C9J366 451 aaPredicted RBP19.57■□□□□ 0.72
TNFRSF1B-204ENST00000536782 MATN3O15232 486 aa19.57■□□□□ 0.72
TNFRSF1B-204ENST00000536782 PTMSP20962 102 aa19.57■□□□□ 0.72
TNFRSF1B-204ENST00000536782 CCNCP24863 283 aa19.57■□□□□ 0.72
TNFRSF1B-204ENST00000536782 PBX1P40424 430 aa19.57■□□□□ 0.72
TNFRSF1B-204ENST00000536782 ARSEP51690 589 aa19.57■□□□□ 0.72
TNFRSF1B-204ENST00000536782 LIMK2P53671 638 aa19.57■□□□□ 0.72
TNFRSF1B-204ENST00000536782 ZBED6P86452 979 aa19.57■□□□□ 0.72
TNFRSF1B-204ENST00000536782 FANCCQ00597 558 aa19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms