RNA–Protein interactions for RNA: ENST00000535871.1

CDCA3-205, Transcript of cell division cycle associated 3, humanhuman

TSL 5

Gene CDCA3, Length 454 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-205ENST00000535871 RGS16O15492 202 aaPredicted RBP6.49□□□□□ -1.37
CDCA3-205ENST00000535871 UGT2B4P06133 528 aa6.49□□□□□ -1.37
CDCA3-205ENST00000535871 EPHX1P07099 455 aa6.49□□□□□ -1.37
CDCA3-205ENST00000535871 GSTM1P09488 218 aa6.49□□□□□ -1.37
CDCA3-205ENST00000535871 COL6A2P12110 1019 aa6.49□□□□□ -1.37
CDCA3-205ENST00000535871 ARNTP27540 789 aa6.49□□□□□ -1.37
CDCA3-205ENST00000535871 HOXA6P31267 233 aa6.49□□□□□ -1.37
CDCA3-205ENST00000535871 VIPR1P32241 457 aa6.49□□□□□ -1.37
CDCA3-205ENST00000535871 MMP12P39900 470 aa6.49□□□□□ -1.37
CDCA3-205ENST00000535871 CHRNA4P43681 627 aa6.49□□□□□ -1.37
CDCA3-205ENST00000535871 DGKEP52429 567 aa6.49□□□□□ -1.37
CDCA3-205ENST00000535871 STC1P52823 247 aa6.49□□□□□ -1.37
CDCA3-205ENST00000535871 LIMK2P53671 638 aa6.49□□□□□ -1.37
CDCA3-205ENST00000535871 PSMA6P60900 246 aaKnown RBP6.49□□□□□ -1.37
CDCA3-205ENST00000535871 SATB1Q01826 763 aa6.49□□□□□ -1.37
CDCA3-205ENST00000535871 GSTM4Q03013 218 aa6.49□□□□□ -1.37
CDCA3-205ENST00000535871 KDSRQ06136 332 aa6.49□□□□□ -1.37
CDCA3-205ENST00000535871 DPTQ07507 201 aa6.49□□□□□ -1.37
CDCA3-205ENST00000535871 THOC5Q13769 683 aaKnown RBP6.49□□□□□ -1.37
CDCA3-205ENST00000535871 ITGA9Q13797 1035 aa6.49□□□□□ -1.37
CDCA3-205ENST00000535871 ITIH4Q14624 930 aa6.49□□□□□ -1.37
CDCA3-205ENST00000535871 CNGA3Q16281 694 aa6.49□□□□□ -1.37
CDCA3-205ENST00000535871 INSCQ1MX18 579 aa6.49□□□□□ -1.37
CDCA3-205ENST00000535871 KRT71Q3SY84 523 aa6.49□□□□□ -1.37
CDCA3-205ENST00000535871 TTC31Q49AM3 519 aaPredicted RBP6.49□□□□□ -1.37
CDCA3-205ENST00000535871 TMEM52BQ4KMG9 183 aa6.49□□□□□ -1.37
CDCA3-205ENST00000535871 CEP85LQ5SZL2 805 aa6.49□□□□□ -1.37
CDCA3-205ENST00000535871 EGFLAMQ63HQ2 1017 aa6.49□□□□□ -1.37
CDCA3-205ENST00000535871 ESRP1Q6NXG1 681 aaKnown RBP6.49□□□□□ -1.37
CDCA3-205ENST00000535871 TXNDC11Q6PKC3 985 aa6.49□□□□□ -1.37
CDCA3-205ENST00000535871 THSD4Q6ZMP0 1018 aa6.49□□□□□ -1.37
CDCA3-205ENST00000535871 LEKR1Q6ZMV7 388 aa6.49□□□□□ -1.37
CDCA3-205ENST00000535871 ERN2Q76MJ5 926 aaKnown RBP6.49□□□□□ -1.37
CDCA3-205ENST00000535871 SYT13Q7L8C5 426 aa6.49□□□□□ -1.37
CDCA3-205ENST00000535871 SNX20Q7Z614 316 aa6.49□□□□□ -1.37
CDCA3-205ENST00000535871 CILP2Q8IUL8 1156 aa6.49□□□□□ -1.37
CDCA3-205ENST00000535871 RYBPQ8N488 228 aaPredicted RBP6.49□□□□□ -1.37
CDCA3-205ENST00000535871 IL17RCQ8NAC3 791 aa6.49□□□□□ -1.37
CDCA3-205ENST00000535871 LPCAT1Q8NF37 534 aa6.49□□□□□ -1.37
CDCA3-205ENST00000535871 OR4L1Q8NH43 312 aa6.49□□□□□ -1.37
CDCA3-205ENST00000535871 PIP4K2CQ8TBX8 421 aa6.49□□□□□ -1.37
CDCA3-205ENST00000535871 BLOC1S5Q8TDH9 187 aa6.49□□□□□ -1.37
CDCA3-205ENST00000535871 CYB5D2Q8WUJ1 264 aa6.49□□□□□ -1.37
CDCA3-205ENST00000535871 CLDN23Q96B33 292 aa6.49□□□□□ -1.37
CDCA3-205ENST00000535871 ZNF669Q96BR6 464 aaPredicted RBP6.49□□□□□ -1.37
CDCA3-205ENST00000535871 ULK4Q96C45 1275 aa6.49□□□□□ -1.37
CDCA3-205ENST00000535871 TLCD1Q96CP7 247 aa6.49□□□□□ -1.37
CDCA3-205ENST00000535871 MFSD3Q96ES6 412 aa6.49□□□□□ -1.37
CDCA3-205ENST00000535871 EXOC2Q96KP1 924 aa6.49□□□□□ -1.37
CDCA3-205ENST00000535871 ATP6V1G3Q96LB4 118 aa6.49□□□□□ -1.37
CDCA3-205ENST00000535871 NSMCE3Q96MG7 304 aa6.49□□□□□ -1.37
CDCA3-205ENST00000535871 PWWP2AQ96N64 755 aa6.49□□□□□ -1.37
CDCA3-205ENST00000535871 PAFAH2Q99487 392 aa6.49□□□□□ -1.37
CDCA3-205ENST00000535871 ZSCAN5AQ9BUG6 496 aa6.49□□□□□ -1.37
CDCA3-205ENST00000535871 GPR63Q9BZJ6 419 aa6.49□□□□□ -1.37
CDCA3-205ENST00000535871 PCED1AQ9H1Q7 454 aa6.49□□□□□ -1.37
CDCA3-205ENST00000535871 TNKS2Q9H2K2 1166 aa6.49□□□□□ -1.37
CDCA3-205ENST00000535871 RHOJQ9H4E5 214 aa6.49□□□□□ -1.37
CDCA3-205ENST00000535871 ZDHHC6Q9H6R6 413 aa6.49□□□□□ -1.37
CDCA3-205ENST00000535871 CNOT10Q9H9A5 744 aaKnown RBP6.49□□□□□ -1.37
CDCA3-205ENST00000535871 POPDC3Q9HBV1 291 aa6.49□□□□□ -1.37
CDCA3-205ENST00000535871 PREBQ9HCU5 417 aa6.49□□□□□ -1.37
CDCA3-205ENST00000535871 ARHGEF3Q9NR81 526 aa6.49□□□□□ -1.37
CDCA3-205ENST00000535871 HEBP1Q9NRV9 189 aa6.49□□□□□ -1.37
CDCA3-205ENST00000535871 C20orf96Q9NUD7 363 aaPredicted RBP6.49□□□□□ -1.37
CDCA3-205ENST00000535871 PKD2L2Q9NZM6 624 aa6.49□□□□□ -1.37
CDCA3-205ENST00000535871 HCN2Q9UL51 889 aa6.49□□□□□ -1.37
CDCA3-205ENST00000535871 ACTL7AQ9Y615 435 aa6.49□□□□□ -1.37
CDCA3-205ENST00000535871 DYNC1LI1Q9Y6G9 523 aaKnown RBP6.49□□□□□ -1.37
CDCA3-205ENST00000535871 ZNF106Q9H2Y7 1883 aaKnown RBP6.49□□□□□ -1.37
CDCA3-205ENST00000535871 PRUNE2Q8WUY3 3088 aa6.48□□□□□ -1.37
CDCA3-205ENST00000535871 TCF20Q9UGU0 1960 aaKnown RBP6.48□□□□□ -1.37
CDCA3-205ENST00000535871 CCDC163A0A0D9SF12 145 aa6.48□□□□□ -1.37
CDCA3-205ENST00000535871 C1orf232A0A0U1RR37 186 aa6.48□□□□□ -1.37
CDCA3-205ENST00000535871 A0A1W2PQF6 199 aa6.48□□□□□ -1.37
CDCA3-205ENST00000535871 KANSL1LA0AUZ9 987 aa6.48□□□□□ -1.37
CDCA3-205ENST00000535871 C10orf142B7Z368 130 aa6.48□□□□□ -1.37
CDCA3-205ENST00000535871 GPR89AB7ZAQ6 455 aa6.48□□□□□ -1.37
CDCA3-205ENST00000535871 EIF3FO00303 357 aaPredicted RBP6.48□□□□□ -1.37
CDCA3-205ENST00000535871 VAPBO95292 243 aa6.48□□□□□ -1.37
CDCA3-205ENST00000535871 PIGNO95427 931 aa6.48□□□□□ -1.37
CDCA3-205ENST00000535871 SYF2O95926 243 aaKnown RBP6.48□□□□□ -1.37
CDCA3-205ENST00000535871 SHBGP04278 402 aa6.48□□□□□ -1.37
CDCA3-205ENST00000535871 CTSLP07711 333 aa6.48□□□□□ -1.37
CDCA3-205ENST00000535871 GSTA1P08263 222 aa6.48□□□□□ -1.37
CDCA3-205ENST00000535871 GPR89BP0CG08 455 aa6.48□□□□□ -1.37
CDCA3-205ENST00000535871 CHRNB1P11230 501 aa6.48□□□□□ -1.37
CDCA3-205ENST00000535871 BMP1P13497 986 aa6.48□□□□□ -1.37
CDCA3-205ENST00000535871 ADRB3P13945 408 aa6.48□□□□□ -1.37
CDCA3-205ENST00000535871 IL9P15248 144 aa6.48□□□□□ -1.37
CDCA3-205ENST00000535871 TIMP2P16035 220 aa6.48□□□□□ -1.37
CDCA3-205ENST00000535871 TPH1P17752 444 aa6.48□□□□□ -1.37
CDCA3-205ENST00000535871 ITGALP20701 1170 aa6.48□□□□□ -1.37
CDCA3-205ENST00000535871 XPAP23025 273 aaPredicted RBP6.48□□□□□ -1.37
CDCA3-205ENST00000535871 RPS3P23396 243 aaKnown RBP eCLIP6.48□□□□□ -1.373e-9■■■■■ 36.7
CDCA3-205ENST00000535871 VARSP26640 1264 aaKnown RBP6.48□□□□□ -1.37
CDCA3-205ENST00000535871 NMBRP28336 390 aa6.48□□□□□ -1.37
CDCA3-205ENST00000535871 GCAP28676 217 aa6.48□□□□□ -1.37
CDCA3-205ENST00000535871 HNF1BP35680 557 aa6.48□□□□□ -1.37
CDCA3-205ENST00000535871 SPAM1P38567 509 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms