RNA–Protein interactions for RNA: ENST00000534532.6

NCAPD3-213, Transcript of non-SMC condensin II complex subunit D3, human

TSL 2

Gene NCAPD3, Length 5,539 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NCAPD3-213	ENST00000534532	SERPINB1	P30740	379 aa		15.7	■□□□□ 0.1
NCAPD3-213	ENST00000534532	HNRNPD	Q14103	355 aa	Known RBP	15.7	■□□□□ 0.1
NCAPD3-213	ENST00000534532	TCHHL1	Q5QJ38	904 aa	Predicted RBP	15.7	■□□□□ 0.1
NCAPD3-213	ENST00000534532	CYB5D1	Q6P9G0	228 aa		15.7	■□□□□ 0.1
NCAPD3-213	ENST00000534532	ZNF276	Q8N554	614 aa		15.7	■□□□□ 0.1
NCAPD3-213	ENST00000534532	RNF148	Q8N7C7	305 aa		15.7	■□□□□ 0.1
NCAPD3-213	ENST00000534532	HMCES	Q96FZ2	354 aa		15.7	■□□□□ 0.1
NCAPD3-213	ENST00000534532	ITCH	Q96J02	903 aa		15.7	■□□□□ 0.1
NCAPD3-213	ENST00000534532	NTPCR	Q9BSD7	190 aa	Known RBP	15.7	■□□□□ 0.1
NCAPD3-213	ENST00000534532	TMEM79	Q9BSE2	394 aa		15.7	■□□□□ 0.1
NCAPD3-213	ENST00000534532	GBA3	Q9H227	469 aa		15.7	■□□□□ 0.1
NCAPD3-213	ENST00000534532	MMADHC	Q9H3L0	296 aa	Predicted RBP	15.7	■□□□□ 0.1
NCAPD3-213	ENST00000534532	KLHL1	Q9NR64	748 aa		15.7	■□□□□ 0.1
NCAPD3-213	ENST00000534532	MCIDAS	D6RGH6	385 aa		15.7	■□□□□ 0.1
NCAPD3-213	ENST00000534532	SMNDC1	O75940	238 aa	Known RBP eCLIP	15.7	■□□□□ 0.1
NCAPD3-213	ENST00000534532	SCTR	P47872	440 aa		15.7	■□□□□ 0.1
NCAPD3-213	ENST00000534532	CYP4F2	P78329	520 aa		15.7	■□□□□ 0.1
NCAPD3-213	ENST00000534532	MINDY4	Q4G0A6	757 aa		15.7	■□□□□ 0.1
NCAPD3-213	ENST00000534532	GCNT7	Q6ZNI0	430 aa		15.7	■□□□□ 0.1
NCAPD3-213	ENST00000534532	FAM220A	Q7Z4H9	259 aa		15.7	■□□□□ 0.1
NCAPD3-213	ENST00000534532	ARMC8	Q8IUR7	673 aa		15.7	■□□□□ 0.1
NCAPD3-213	ENST00000534532	ART4	Q93070	314 aa		15.7	■□□□□ 0.1
NCAPD3-213	ENST00000534532	RPL10L	Q96L21	214 aa	Known RBP	15.7	■□□□□ 0.1
NCAPD3-213	ENST00000534532	SAMD11	Q96NU1	681 aa		15.7	■□□□□ 0.1
NCAPD3-213	ENST00000534532	RACGAP1	Q9H0H5	632 aa		15.7	■□□□□ 0.1
NCAPD3-213	ENST00000534532	MTF2	Q9Y483	593 aa	Predicted RBP	15.7	■□□□□ 0.1
NCAPD3-213	ENST00000534532	OR2AG2	A6NM03	316 aa		15.7	■□□□□ 0.1
NCAPD3-213	ENST00000534532	SLC35G6	P0C7Q6	338 aa		15.7	■□□□□ 0.1
NCAPD3-213	ENST00000534532	LMO2	P25791	158 aa		15.7	■□□□□ 0.1
NCAPD3-213	ENST00000534532	PSMB9	P28065	219 aa		15.7	■□□□□ 0.1
NCAPD3-213	ENST00000534532	RALGDS	Q12967	914 aa		15.7	■□□□□ 0.1
NCAPD3-213	ENST00000534532	IRGC	Q6NXR0	463 aa		15.7	■□□□□ 0.1
NCAPD3-213	ENST00000534532	SCIMP	Q6UWF3	145 aa		15.7	■□□□□ 0.1
NCAPD3-213	ENST00000534532	ZNF563	Q8TA94	476 aa		15.7	■□□□□ 0.1
NCAPD3-213	ENST00000534532	FBXO30	Q8TB52	745 aa		15.7	■□□□□ 0.1
NCAPD3-213	ENST00000534532	SIPA1	Q96FS4	1042 aa		15.7	■□□□□ 0.1
NCAPD3-213	ENST00000534532	CDH19	Q9H159	772 aa		15.7	■□□□□ 0.1
NCAPD3-213	ENST00000534532	MAT2B	Q9NZL9	334 aa		15.7	■□□□□ 0.1
NCAPD3-213	ENST00000534532	DNM1L	O00429	736 aa		15.69	■□□□□ 0.1
NCAPD3-213	ENST00000534532	PTS	Q03393	145 aa		15.69	■□□□□ 0.1
NCAPD3-213	ENST00000534532	INA	Q16352	499 aa		15.69	■□□□□ 0.1
NCAPD3-213	ENST00000534532	ADAMTS15	Q8TE58	950 aa		15.69	■□□□□ 0.1
NCAPD3-213	ENST00000534532	POP5	Q969H6	163 aa	Known RBP	15.69	■□□□□ 0.1
NCAPD3-213	ENST00000534532	RNF186	Q9NXI6	227 aa		15.69	■□□□□ 0.1
NCAPD3-213	ENST00000534532	CD84	Q9UIB8	345 aa		15.69	■□□□□ 0.1
NCAPD3-213	ENST00000534532	WNT7A	O00755	349 aa		15.69	■□□□□ 0.1
NCAPD3-213	ENST00000534532	CLOCK	O15516	846 aa		15.69	■□□□□ 0.1
NCAPD3-213	ENST00000534532	BMP6	P22004	513 aa		15.69	■□□□□ 0.1
NCAPD3-213	ENST00000534532	DGKK	Q5KSL6	1271 aa		15.69	■□□□□ 0.1
NCAPD3-213	ENST00000534532	EOGT	Q5NDL2	527 aa		15.69	■□□□□ 0.1
NCAPD3-213	ENST00000534532	ALKBH2	Q6NS38	261 aa		15.69	■□□□□ 0.1
NCAPD3-213	ENST00000534532	ESRP1	Q6NXG1	681 aa	Known RBP	15.69	■□□□□ 0.1
NCAPD3-213	ENST00000534532	C11orf88	Q6PI97	169 aa		15.69	■□□□□ 0.1
NCAPD3-213	ENST00000534532	CHST15	Q7LFX5	561 aa	Predicted RBP	15.69	■□□□□ 0.1
NCAPD3-213	ENST00000534532	ULK2	Q8IYT8	1036 aa		15.69	■□□□□ 0.1
NCAPD3-213	ENST00000534532	MCMBP	Q9BTE3	642 aa		15.69	■□□□□ 0.1
NCAPD3-213	ENST00000534532	PNPLA8	Q9NP80	782 aa		15.69	■□□□□ 0.1
NCAPD3-213	ENST00000534532	CCDC177	Q9NQR7	707 aa	Predicted RBP	15.69	■□□□□ 0.1
NCAPD3-213	ENST00000534532	STMN3	Q9NZ72	180 aa		15.69	■□□□□ 0.1
NCAPD3-213	ENST00000534532		E7ENQ6	273 aa		15.69	■□□□□ 0.1
NCAPD3-213	ENST00000534532	HDAC3	O15379	428 aa		15.69	■□□□□ 0.1
NCAPD3-213	ENST00000534532	LRCH4	O75427	683 aa		15.69	■□□□□ 0.1
NCAPD3-213	ENST00000534532	TFPI	P10646	304 aa		15.69	■□□□□ 0.1
NCAPD3-213	ENST00000534532	H2AFX	P16104	143 aa	Predicted RBP	15.69	■□□□□ 0.1
NCAPD3-213	ENST00000534532	NRIP1	P48552	1158 aa		15.69	■□□□□ 0.1
NCAPD3-213	ENST00000534532	FOXM1	Q08050	763 aa		15.69	■□□□□ 0.1
NCAPD3-213	ENST00000534532	RFTN1	Q14699	578 aa	Predicted RBP	15.69	■□□□□ 0.1
NCAPD3-213	ENST00000534532	UBXN11	Q5T124	520 aa		15.69	■□□□□ 0.1
NCAPD3-213	ENST00000534532	CCNYL2	Q5T2Q4	361 aa		15.69	■□□□□ 0.1
NCAPD3-213	ENST00000534532	FAM180A	Q6UWF9	173 aa		15.69	■□□□□ 0.1
NCAPD3-213	ENST00000534532	PLD5	Q8N7P1	536 aa		15.69	■□□□□ 0.1
NCAPD3-213	ENST00000534532	ZNF296	Q8WUU4	475 aa	Predicted RBP	15.69	■□□□□ 0.1
NCAPD3-213	ENST00000534532	NDUFA13	Q9P0J0	144 aa		15.69	■□□□□ 0.1
NCAPD3-213	ENST00000534532	RFXANK	O14593	260 aa		15.69	■□□□□ 0.1
NCAPD3-213	ENST00000534532	AP5Z1	O43299	807 aa		15.69	■□□□□ 0.1
NCAPD3-213	ENST00000534532	STK16	O75716	305 aa		15.69	■□□□□ 0.1
NCAPD3-213	ENST00000534532	FAM163B	P0C2L3	166 aa		15.69	■□□□□ 0.1
NCAPD3-213	ENST00000534532	TSPAN8	P19075	237 aa		15.69	■□□□□ 0.1
NCAPD3-213	ENST00000534532	TIE1	P35590	1138 aa		15.69	■□□□□ 0.1
NCAPD3-213	ENST00000534532	GBE1	Q04446	702 aa		15.69	■□□□□ 0.1
NCAPD3-213	ENST00000534532	NAE1	Q13564	534 aa		15.69	■□□□□ 0.1
NCAPD3-213	ENST00000534532	RFTN2	Q52LD8	501 aa	Predicted RBP	15.69	■□□□□ 0.1
NCAPD3-213	ENST00000534532	CARD16	Q5EG05	197 aa		15.69	■□□□□ 0.1
NCAPD3-213	ENST00000534532	RNASEH2B	Q5TBB1	312 aa	Known RBP	15.69	■□□□□ 0.1
NCAPD3-213	ENST00000534532	HECTD2	Q5U5R9	776 aa		15.69	■□□□□ 0.1
NCAPD3-213	ENST00000534532	LRRC74B	Q6ZQY2	392 aa		15.69	■□□□□ 0.1
NCAPD3-213	ENST00000534532	AUTS2	Q8WXX7	1259 aa		15.69	■□□□□ 0.1
NCAPD3-213	ENST00000534532	QKI	Q96PU8	341 aa	Known RBP eCLIP	15.69	■□□□□ 0.1	1e-6	■□□□□ 9.7
NCAPD3-213	ENST00000534532	ALOX15B	O15296	676 aa		15.69	■□□□□ 0.1
NCAPD3-213	ENST00000534532	ADH5	P11766	374 aa		15.69	■□□□□ 0.1
NCAPD3-213	ENST00000534532	GJA9	P57773	515 aa		15.69	■□□□□ 0.1
NCAPD3-213	ENST00000534532	CDC42	P60953	191 aa		15.69	■□□□□ 0.1
NCAPD3-213	ENST00000534532	AEN	Q8WTP8	325 aa	Known RBP	15.69	■□□□□ 0.1
NCAPD3-213	ENST00000534532	FBXW11	Q9UKB1	542 aa		15.69	■□□□□ 0.1
NCAPD3-213	ENST00000534532	TSPAN19	P0C672	248 aa		15.68	■□□□□ 0.1
NCAPD3-213	ENST00000534532	KRR1	Q13601	381 aa	Known RBP	15.68	■□□□□ 0.1
NCAPD3-213	ENST00000534532	MON1B	Q7L1V2	547 aa		15.68	■□□□□ 0.1
NCAPD3-213	ENST00000534532	CIR1	Q86X95	450 aa	Predicted RBP	15.68	■□□□□ 0.1
NCAPD3-213	ENST00000534532	SPATA6L	Q8N4H0	392 aa		15.68	■□□□□ 0.1
NCAPD3-213	ENST00000534532	PCDH20	Q8N6Y1	951 aa	Known RBP	15.68	■□□□□ 0.1

Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms