RNA–Protein interactions for RNA: ENST00000534442.5

ECHDC1-223, Transcript of ethylmalonyl-CoA decarboxylase 1, human

TSL 5

Gene ECHDC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ECHDC1-223	ENST00000534442	TRMT61A	Q96FX7	289 aa	Known RBP	4.78	□□□□□ -1.64
ECHDC1-223	ENST00000534442	PLEKHG4B	Q96PX9	1271 aa		4.78	□□□□□ -1.64
ECHDC1-223	ENST00000534442	FTHL17	Q9BXU8	183 aa		4.78	□□□□□ -1.64
ECHDC1-223	ENST00000534442	NT5C3A	Q9H0P0	336 aa		4.78	□□□□□ -1.64
ECHDC1-223	ENST00000534442	ACAD9	Q9H845	621 aa		4.78	□□□□□ -1.64
ECHDC1-223	ENST00000534442	ZNF334	Q9HCZ1	680 aa	Predicted RBP	4.78	□□□□□ -1.64
ECHDC1-223	ENST00000534442	PILRB	Q9UKJ0	227 aa		4.78	□□□□□ -1.64
ECHDC1-223	ENST00000534442	ENTPD4	Q9Y227	616 aa		4.78	□□□□□ -1.64
ECHDC1-223	ENST00000534442	MGAM2	Q2M2H8	2515 aa		4.78	□□□□□ -1.64
ECHDC1-223	ENST00000534442	DOCK6	Q96HP0	2047 aa		4.77	□□□□□ -1.65
ECHDC1-223	ENST00000534442	PI4KAP2	A4QPH2	592 aa		4.77	□□□□□ -1.65
ECHDC1-223	ENST00000534442	MBD3L5	A6NJ08	208 aa	Predicted RBP	4.77	□□□□□ -1.65
ECHDC1-223	ENST00000534442	CES2	O00748	559 aa		4.77	□□□□□ -1.65
ECHDC1-223	ENST00000534442	PRAMEF2	O60811	474 aa		4.77	□□□□□ -1.65
ECHDC1-223	ENST00000534442	NXPH3	O95157	252 aa		4.77	□□□□□ -1.65
ECHDC1-223	ENST00000534442	TBX18	O95935	607 aa		4.77	□□□□□ -1.65
ECHDC1-223	ENST00000534442	CSF1	P09603	554 aa		4.77	□□□□□ -1.65
ECHDC1-223	ENST00000534442	TMIGD3	P0DMS9	266 aa	Predicted RBP	4.77	□□□□□ -1.65
ECHDC1-223	ENST00000534442	ZNF20	P17024	532 aa		4.77	□□□□□ -1.65
ECHDC1-223	ENST00000534442	MAN1A1	P33908	653 aa		4.77	□□□□□ -1.65
ECHDC1-223	ENST00000534442	SHMT1	P34896	483 aa		4.77	□□□□□ -1.65
ECHDC1-223	ENST00000534442	DIO1	P49895	249 aa		4.77	□□□□□ -1.65
ECHDC1-223	ENST00000534442	TPTE	P56180	551 aa		4.77	□□□□□ -1.65
ECHDC1-223	ENST00000534442	KHDRBS1	Q07666	443 aa	Known RBP eCLIP	4.77	□□□□□ -1.65
ECHDC1-223	ENST00000534442	ARHGAP1	Q07960	439 aa		4.77	□□□□□ -1.65
ECHDC1-223	ENST00000534442	FOXD4	Q12950	439 aa	Predicted RBP	4.77	□□□□□ -1.65
ECHDC1-223	ENST00000534442	WDR45B	Q5MNZ6	344 aa		4.77	□□□□□ -1.65
ECHDC1-223	ENST00000534442	LYSMD4	Q5XG99	296 aa		4.77	□□□□□ -1.65
ECHDC1-223	ENST00000534442	FAAH2	Q6GMR7	532 aa		4.77	□□□□□ -1.65
ECHDC1-223	ENST00000534442	USP51	Q70EK9	711 aa		4.77	□□□□□ -1.65
ECHDC1-223	ENST00000534442	PARS2	Q7L3T8	475 aa	Known RBP	4.77	□□□□□ -1.65
ECHDC1-223	ENST00000534442	LPCAT2	Q7L5N7	544 aa		4.77	□□□□□ -1.65
ECHDC1-223	ENST00000534442	TMEM173	Q86WV6	379 aa	Predicted RBP	4.77	□□□□□ -1.65
ECHDC1-223	ENST00000534442	NME8	Q8N427	588 aa		4.77	□□□□□ -1.65
ECHDC1-223	ENST00000534442	SIRT6	Q8N6T7	355 aa		4.77	□□□□□ -1.65
ECHDC1-223	ENST00000534442	PI4KAP1	Q8N8J0	262 aa		4.77	□□□□□ -1.65
ECHDC1-223	ENST00000534442	RP9	Q8TA86	221 aa	Known RBP	4.77	□□□□□ -1.65
ECHDC1-223	ENST00000534442	ITFG1	Q8TB96	612 aa		4.77	□□□□□ -1.65
ECHDC1-223	ENST00000534442	CLEC4C	Q8WTT0	213 aa		4.77	□□□□□ -1.65
ECHDC1-223	ENST00000534442	ST8SIA4	Q92187	359 aa		4.77	□□□□□ -1.65
ECHDC1-223	ENST00000534442	FAR2	Q96K12	515 aa		4.77	□□□□□ -1.65
ECHDC1-223	ENST00000534442	ZNF578	Q96N58	590 aa	Predicted RBP	4.77	□□□□□ -1.65
ECHDC1-223	ENST00000534442	LENG8	Q96PV6	779 aa	Predicted RBP	4.77	□□□□□ -1.65
ECHDC1-223	ENST00000534442	CDK5RAP1	Q96SZ6	601 aa	Known RBP	4.77	□□□□□ -1.65
ECHDC1-223	ENST00000534442	C1QTNF3	Q9BXJ4	246 aa		4.77	□□□□□ -1.65
ECHDC1-223	ENST00000534442	PAIP1	Q9H074	479 aa	Known RBP	4.77	□□□□□ -1.65
ECHDC1-223	ENST00000534442	JMJD4	Q9H9V9	463 aa		4.77	□□□□□ -1.65
ECHDC1-223	ENST00000534442	PREB	Q9HCU5	417 aa		4.77	□□□□□ -1.65
ECHDC1-223	ENST00000534442	SERTAD4	Q9NUC0	356 aa		4.77	□□□□□ -1.65
ECHDC1-223	ENST00000534442	TMLHE	Q9NVH6	421 aa		4.77	□□□□□ -1.65
ECHDC1-223	ENST00000534442	MGAT4C	Q9UBM8	478 aa		4.77	□□□□□ -1.65
ECHDC1-223	ENST00000534442	AMFR	Q9UKV5	643 aa		4.77	□□□□□ -1.65
ECHDC1-223	ENST00000534442	SLC12A4	Q9UP95	1085 aa		4.77	□□□□□ -1.65
ECHDC1-223	ENST00000534442	TSC22D4	Q9Y3Q8	395 aa		4.77	□□□□□ -1.65
ECHDC1-223	ENST00000534442	PDCD11	Q14690	1871 aa	Known RBP	4.77	□□□□□ -1.65
ECHDC1-223	ENST00000534442	ZFC3H1	O60293	1989 aa	Known RBP	4.76	□□□□□ -1.65
ECHDC1-223	ENST00000534442	UBR4	Q5T4S7	5183 aa		4.76	□□□□□ -1.65
ECHDC1-223	ENST00000534442	CCDC196	A0A1B0GTZ2	297 aa		4.76	□□□□□ -1.65
ECHDC1-223	ENST00000534442	SAC3D1	A6NKF1	404 aa		4.76	□□□□□ -1.65
ECHDC1-223	ENST00000534442	TMPRSS11D	O60235	418 aa		4.76	□□□□□ -1.65
ECHDC1-223	ENST00000534442	TSPAN3	O60637	253 aa		4.76	□□□□□ -1.65
ECHDC1-223	ENST00000534442	ZBED4	O75132	1171 aa		4.76	□□□□□ -1.65
ECHDC1-223	ENST00000534442	APBB3	O95704	486 aa		4.76	□□□□□ -1.65
ECHDC1-223	ENST00000534442	ELFN1	P0C7U0	828 aa		4.76	□□□□□ -1.65
ECHDC1-223	ENST00000534442	ACP5	P13686	325 aa		4.76	□□□□□ -1.65
ECHDC1-223	ENST00000534442	CPA1	P15085	419 aa		4.76	□□□□□ -1.65
ECHDC1-223	ENST00000534442	CHN1	P15882	459 aa		4.76	□□□□□ -1.65
ECHDC1-223	ENST00000534442	ZNF37A	P17032	561 aa	Predicted RBP	4.76	□□□□□ -1.65
ECHDC1-223	ENST00000534442	PROZ	P22891	400 aa		4.76	□□□□□ -1.65
ECHDC1-223	ENST00000534442	GDI1	P31150	447 aa		4.76	□□□□□ -1.65
ECHDC1-223	ENST00000534442	HOXC8	P31273	242 aa		4.76	□□□□□ -1.65
ECHDC1-223	ENST00000534442	GRK5	P34947	590 aa		4.76	□□□□□ -1.65
ECHDC1-223	ENST00000534442	HOXD12	P35452	270 aa		4.76	□□□□□ -1.65
ECHDC1-223	ENST00000534442	CASP2	P42575	452 aa		4.76	□□□□□ -1.65
ECHDC1-223	ENST00000534442	DPP6	P42658	865 aa		4.76	□□□□□ -1.65
ECHDC1-223	ENST00000534442	RCAN1	P53805	252 aa		4.76	□□□□□ -1.65
ECHDC1-223	ENST00000534442	SUMO2	P61956	95 aa	Known RBP	4.76	□□□□□ -1.65
ECHDC1-223	ENST00000534442	RAE1	P78406	368 aa	Known RBP	4.76	□□□□□ -1.65
ECHDC1-223	ENST00000534442	MGAT3	Q09327	533 aa		4.76	□□□□□ -1.65
ECHDC1-223	ENST00000534442	PON2	Q15165	354 aa		4.76	□□□□□ -1.65
ECHDC1-223	ENST00000534442	GPATCH4	Q5T3I0	446 aa	Known RBP	4.76	□□□□□ -1.65
ECHDC1-223	ENST00000534442	HES3	Q5TGS1	186 aa		4.76	□□□□□ -1.65
ECHDC1-223	ENST00000534442	FNDC7	Q5VTL7	733 aa		4.76	□□□□□ -1.65
ECHDC1-223	ENST00000534442	ANO7	Q6IWH7	933 aa		4.76	□□□□□ -1.65
ECHDC1-223	ENST00000534442	KCNV1	Q6PIU1	500 aa		4.76	□□□□□ -1.65
ECHDC1-223	ENST00000534442	KIAA1324	Q6UXG2	1013 aa	Known RBP	4.76	□□□□□ -1.65
ECHDC1-223	ENST00000534442		Q6ZNX1	250 aa		4.76	□□□□□ -1.65
ECHDC1-223	ENST00000534442	ZNF551	Q7Z340	670 aa	Predicted RBP	4.76	□□□□□ -1.65
ECHDC1-223	ENST00000534442	LRRC43	Q8N309	656 aa		4.76	□□□□□ -1.65
ECHDC1-223	ENST00000534442	GALNT4	Q8N4A0	578 aa		4.76	□□□□□ -1.65
ECHDC1-223	ENST00000534442	FSIP1	Q8NA03	581 aa		4.76	□□□□□ -1.65
ECHDC1-223	ENST00000534442	OR52L2P	Q8NGH6	319 aa		4.76	□□□□□ -1.65
ECHDC1-223	ENST00000534442	PROKR1	Q8TCW9	393 aa		4.76	□□□□□ -1.65
ECHDC1-223	ENST00000534442	GLMP	Q8WWB7	406 aa		4.76	□□□□□ -1.65
ECHDC1-223	ENST00000534442	ING5	Q8WYH8	240 aa		4.76	□□□□□ -1.65
ECHDC1-223	ENST00000534442	HDAC2	Q92769	488 aa	Known RBP	4.76	□□□□□ -1.65
ECHDC1-223	ENST00000534442	ZNF503	Q96F45	646 aa		4.76	□□□□□ -1.65
ECHDC1-223	ENST00000534442	PIGS	Q96S52	555 aa		4.76	□□□□□ -1.65
ECHDC1-223	ENST00000534442	PLEKHF1	Q96S99	279 aa		4.76	□□□□□ -1.65
ECHDC1-223	ENST00000534442	THAP7	Q9BT49	309 aa	Predicted RBP	4.76	□□□□□ -1.65

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