RNA–Protein interactions for RNA: ENST00000533979.5

ATM-223, Transcript of ATM serine/threonine kinase, human

TSL 3

Gene ATM, Length 705 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATM-223	ENST00000533979	CAVIN1	Q6NZI2	390 aa	Known RBP	4.78	□□□□□ -1.64
ATM-223	ENST00000533979	TMEM88	Q6PEY1	159 aa		4.78	□□□□□ -1.64
ATM-223	ENST00000533979	KBTBD6	Q86V97	674 aa		4.78	□□□□□ -1.64
ATM-223	ENST00000533979	TICAM1	Q8IUC6	712 aa		4.78	□□□□□ -1.64
ATM-223	ENST00000533979	CCAR2	Q8N163	923 aa	Known RBP	4.78	□□□□□ -1.64
ATM-223	ENST00000533979	PAQR4	Q8N4S7	273 aa	Predicted RBP	4.78	□□□□□ -1.64
ATM-223	ENST00000533979	EXD3	Q8N9H8	876 aa		4.78	□□□□□ -1.64
ATM-223	ENST00000533979	ADPRHL1	Q8NDY3	354 aa		4.78	□□□□□ -1.64
ATM-223	ENST00000533979	OR52N4	Q8NGI2	321 aa		4.78	□□□□□ -1.64
ATM-223	ENST00000533979	LILRB1	Q8NHL6	650 aa	Predicted RBP	4.78	□□□□□ -1.64
ATM-223	ENST00000533979	CNOT9	Q92600	299 aa	Known RBP	4.78	□□□□□ -1.64
ATM-223	ENST00000533979	ZNF622	Q969S3	477 aa	Known RBP eCLIP	4.78	□□□□□ -1.64
ATM-223	ENST00000533979	EXOC4	Q96A65	974 aa		4.78	□□□□□ -1.64
ATM-223	ENST00000533979	SAT2	Q96F10	170 aa	Predicted RBP	4.78	□□□□□ -1.64
ATM-223	ENST00000533979	ZNF347	Q96SE7	839 aa		4.78	□□□□□ -1.64
ATM-223	ENST00000533979	MRPL1	Q9BYD6	325 aa	Known RBP	4.78	□□□□□ -1.64
ATM-223	ENST00000533979	FBRSL1	Q9HCM7	1045 aa	Known RBP	4.78	□□□□□ -1.64
ATM-223	ENST00000533979	COQ3	Q9NZJ6	369 aa		4.78	□□□□□ -1.64
ATM-223	ENST00000533979	ANAPC2	Q9UJX6	822 aa		4.78	□□□□□ -1.64
ATM-223	ENST00000533979	UTS2R	Q9UKP6	389 aa		4.78	□□□□□ -1.64
ATM-223	ENST00000533979	PADI1	Q9ULC6	663 aa		4.78	□□□□□ -1.64
ATM-223	ENST00000533979	LAMP3	Q9UQV4	416 aa		4.78	□□□□□ -1.64
ATM-223	ENST00000533979	MTF2	Q9Y483	593 aa	Predicted RBP	4.78	□□□□□ -1.64
ATM-223	ENST00000533979	COPG1	Q9Y678	874 aa	Known RBP	4.78	□□□□□ -1.64
ATM-223	ENST00000533979	SESN1	Q9Y6P5	492 aa		4.78	□□□□□ -1.64
ATM-223	ENST00000533979	ABCA8	O94911	1581 aa		4.78	□□□□□ -1.64
ATM-223	ENST00000533979	NEO1	Q92859	1461 aa		4.77	□□□□□ -1.65
ATM-223	ENST00000533979	CYP3A7-CYP3A51P	A0A087WV96	503 aa		4.77	□□□□□ -1.65
ATM-223	ENST00000533979		A0A1W2PPC1	479 aa		4.77	□□□□□ -1.65
ATM-223	ENST00000533979	WDR46	O15213	610 aa	Known RBP	4.77	□□□□□ -1.65
ATM-223	ENST00000533979	LIAS	O43766	372 aa		4.77	□□□□□ -1.65
ATM-223	ENST00000533979	HMMR	O75330	724 aa		4.77	□□□□□ -1.65
ATM-223	ENST00000533979	CNTN5	O94779	1100 aa		4.77	□□□□□ -1.65
ATM-223	ENST00000533979	ABCB1	P08183	1280 aa	Predicted RBP	4.77	□□□□□ -1.65
ATM-223	ENST00000533979	SNRNP70	P08621	437 aa	Known RBP	4.77	□□□□□ -1.65
ATM-223	ENST00000533979	DES	P17661	470 aa		4.77	□□□□□ -1.65
ATM-223	ENST00000533979	HLA-DPA1	P20036	260 aa		4.77	□□□□□ -1.65
ATM-223	ENST00000533979	CYP3A7	P24462	503 aa		4.77	□□□□□ -1.65
ATM-223	ENST00000533979	HOXC8	P31273	242 aa		4.77	□□□□□ -1.65
ATM-223	ENST00000533979	MTNR1A	P48039	350 aa		4.77	□□□□□ -1.65
ATM-223	ENST00000533979	STAT2	P52630	851 aa		4.77	□□□□□ -1.65
ATM-223	ENST00000533979	HSD17B7	P56937	341 aa		4.77	□□□□□ -1.65
ATM-223	ENST00000533979	ARHGAP8	P85298	464 aa		4.77	□□□□□ -1.65
ATM-223	ENST00000533979	CSTF3	Q12996	717 aa	Known RBP	4.77	□□□□□ -1.65
ATM-223	ENST00000533979	COASY	Q13057	564 aa		4.77	□□□□□ -1.65
ATM-223	ENST00000533979	BAAT	Q14032	418 aa	Predicted RBP	4.77	□□□□□ -1.65
ATM-223	ENST00000533979	ASTE1	Q2TB18	679 aa	Predicted RBP	4.77	□□□□□ -1.65
ATM-223	ENST00000533979	CRY2	Q49AN0	593 aa		4.77	□□□□□ -1.65
ATM-223	ENST00000533979	MPP7	Q5T2T1	576 aa		4.77	□□□□□ -1.65
ATM-223	ENST00000533979	ZNF549	Q6P9A3	640 aa		4.77	□□□□□ -1.65
ATM-223	ENST00000533979	SUSD1	Q6UWL2	747 aa		4.77	□□□□□ -1.65
ATM-223	ENST00000533979	SLC46A3	Q7Z3Q1	461 aa		4.77	□□□□□ -1.65
ATM-223	ENST00000533979	DEFB132	Q7Z7B7	95 aa		4.77	□□□□□ -1.65
ATM-223	ENST00000533979	PELI3	Q8N2H9	469 aa		4.77	□□□□□ -1.65
ATM-223	ENST00000533979	TRIML1	Q8N9V2	468 aa		4.77	□□□□□ -1.65
ATM-223	ENST00000533979	KIF18A	Q8NI77	898 aa		4.77	□□□□□ -1.65
ATM-223	ENST00000533979	TMEM174	Q8WUU8	243 aa		4.77	□□□□□ -1.65
ATM-223	ENST00000533979	KRT35	Q92764	455 aa		4.77	□□□□□ -1.65
ATM-223	ENST00000533979	DGAT2	Q96PD7	388 aa		4.77	□□□□□ -1.65
ATM-223	ENST00000533979	FUT8	Q9BYC5	575 aa		4.77	□□□□□ -1.65
ATM-223	ENST00000533979	WSB2	Q9NYS7	404 aa	Predicted RBP	4.77	□□□□□ -1.65
ATM-223	ENST00000533979	MOSPD1	Q9UJG1	213 aa		4.77	□□□□□ -1.65
ATM-223	ENST00000533979	ZNF580	Q9UK33	172 aa		4.77	□□□□□ -1.65
ATM-223	ENST00000533979	INTS6	Q9UL03	887 aa	Known RBP	4.77	□□□□□ -1.65
ATM-223	ENST00000533979	AGTPBP1	Q9UPW5	1226 aa		4.77	□□□□□ -1.65
ATM-223	ENST00000533979	POMT1	Q9Y6A1	747 aa		4.77	□□□□□ -1.65
ATM-223	ENST00000533979	ZFYVE16	Q7Z3T8	1539 aa		4.77	□□□□□ -1.65
ATM-223	ENST00000533979	LRP5	O75197	1615 aa		4.76	□□□□□ -1.65
ATM-223	ENST00000533979	TRAV34	A0A0B4J273	112 aa		4.76	□□□□□ -1.65
ATM-223	ENST00000533979	TRBC2	A0A5B9	178 aa		4.76	□□□□□ -1.65
ATM-223	ENST00000533979	ARHGAP10	A1A4S6	786 aa		4.76	□□□□□ -1.65
ATM-223	ENST00000533979	CCDC69	A6NI79	296 aa		4.76	□□□□□ -1.65
ATM-223	ENST00000533979	C3orf70	A6NLC5	250 aa	Predicted RBP	4.76	□□□□□ -1.65
ATM-223	ENST00000533979	PSMD14	O00487	310 aa		4.76	□□□□□ -1.65
ATM-223	ENST00000533979	SMAD6	O43541	496 aa	Known RBP	4.76	□□□□□ -1.65
ATM-223	ENST00000533979	FTCD	O95954	541 aa		4.76	□□□□□ -1.65
ATM-223	ENST00000533979	IFNA2	P01563	188 aa		4.76	□□□□□ -1.65
ATM-223	ENST00000533979	WNT1	P04628	370 aa		4.76	□□□□□ -1.65
ATM-223	ENST00000533979	LCK	P06239	509 aa		4.76	□□□□□ -1.65
ATM-223	ENST00000533979	CHRM4	P08173	479 aa		4.76	□□□□□ -1.65
ATM-223	ENST00000533979	PGGT1B	P53609	377 aa		4.76	□□□□□ -1.65
ATM-223	ENST00000533979	PMS2	P54278	862 aa		4.76	□□□□□ -1.65
ATM-223	ENST00000533979	MFAP4	P55083	255 aa		4.76	□□□□□ -1.65
ATM-223	ENST00000533979	KRTAP10-9	P60411	292 aa		4.76	□□□□□ -1.65
ATM-223	ENST00000533979	IL1RL1	Q01638	556 aa		4.76	□□□□□ -1.65
ATM-223	ENST00000533979	SNTB1	Q13884	538 aa	Known RBP	4.76	□□□□□ -1.65
ATM-223	ENST00000533979	BYSL	Q13895	437 aa	Known RBP	4.76	□□□□□ -1.65
ATM-223	ENST00000533979	FRG1	Q14331	258 aa	Known RBP	4.76	□□□□□ -1.65
ATM-223	ENST00000533979	SEMA3A	Q14563	771 aa		4.76	□□□□□ -1.65
ATM-223	ENST00000533979	GSTA3	Q16772	222 aa		4.76	□□□□□ -1.65
ATM-223	ENST00000533979	TYSND1	Q2T9J0	566 aa		4.76	□□□□□ -1.65
ATM-223	ENST00000533979	PRTG	Q2VWP7	1150 aa		4.76	□□□□□ -1.65
ATM-223	ENST00000533979	C2orf76	Q3KRA6	126 aa		4.76	□□□□□ -1.65
ATM-223	ENST00000533979	KLHL22	Q53GT1	634 aa		4.76	□□□□□ -1.65
ATM-223	ENST00000533979	RUSC1-AS1	Q66K80	236 aa		4.76	□□□□□ -1.65
ATM-223	ENST00000533979	KIAA0930	Q6ICG6	404 aa	Predicted RBP	4.76	□□□□□ -1.65
ATM-223	ENST00000533979	JADE1	Q6IE81	842 aa		4.76	□□□□□ -1.65
ATM-223	ENST00000533979	NAPEPLD	Q6IQ20	393 aa		4.76	□□□□□ -1.65
ATM-223	ENST00000533979	GJB7	Q6PEY0	223 aa		4.76	□□□□□ -1.65
ATM-223	ENST00000533979	CASC1	Q6TDU7	716 aa		4.76	□□□□□ -1.65

Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms